Basic Information

Gene Symbol
osa
Assembly
GCA_008973525.1
Location
Contig228:359110-388923[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-26 3.6e-23 81.5 0.0 2 89 224 308 223 308 0.94

Sequence Information

Coding Sequence
ATGTCACCGGCCGTCGGTAATTATTCGCCTCGCCCTCCTTATCCGAGTCAAGGATATGGCCCGGGAGCCGGGGGAGGAGGACCCGGTGCCGGTGGTCCCGGTGCTGCTGCCGGTGGACAATATGGCGGTCCCGGACGGCCGCAGTACCCTCCTTACGGGGCAGGTTGGGGCGGTGCCGGAGCACGCCCGCCGCCTCCGCCGCCTCACTACCTCAAACAACAACATTTACAACATAAATTAGGTCCGCAACATATGGGTCCGCCGCCTTCTCATCATGTCATGGGTCCTCCCGGGGAACCTGCACAAGATAACGGTTTACCCGGACCTCCTCCGGCGCCTGCGACTGCCCTCGTTACGACGGGACCCGACGGTGCTCCTTTAGATGATGGCTCACAGCAGAGTACCCTATCGAATGCATCAGCAGCATCTGGTGAAGAAACACCATGTGGAACGACGCGAGGCAGCGGAAGGGGTCCCGGCGGAGGAGCACCGTCTCCTGGAGCTGCATCGCATGCCAGTGGACATGATGATTATGATGCCAGTTCATCCAGCTGGCCTCGTACACCCTCTAGCCCAGTATTTAATAGTCATGTACCACAAGAAACCTATAGAACAAAGCAGAAATCCGATTCCCTGGGGAAGCTCTATGAAATGGACGAGTCACCCGAGAGGCGTGGATGGGTAGAAAGACTGCTGACTTTCATGGAAGAGCGACGAACTCCAATTGCAGCATGCCCTACAATCAGCAAACAACCGCTAGACCTGTATCGACTTTATTTGCTGGTCCGCGAAAGAGGCGGTTTCGTCGAGGTGACAAAAAATAAAACTTGGAAAGATATTGCCGGAATGCTTGGAATTGGAGCTTCTTCGAGTGCAGCTTACACGCTTCGTAAGCATTATACTAAAAATTTACTAGCTTATGAATGTCATTTCGATAGAGGTGGAATTGACCCTCAACCCATCATCAATCAAGTAGAAGCTACAACAAAGAAAAAGTCAAATAAAAACAACAGTGTTCCTAGTCCAGGTTCATCAAATTCTCAAGATTCATTCCCAGGTCCAGGAGGTGCGGGTGGAGCACCTGCAGGTCCAACTATGGATGGTTATGGTCCCCCTTATACAGGGTATCCGCCCGCTTCTCAACCGCAACAAGGTGCTTATCCTGGACAACAAGGATATGCTGGTTACGATCAATATGGTTCTCCTTATCCTCCTAACAGACCTGTATATCCTCCATATGGACCAGAACAAGATAATAGAAGCTATCCTTCTGGAGGAGGCGCAGCTGGTTCAGATCCTTACGGGCGTTACAGTGGAGGCTATGCAGGAGCAGGGCGAGGGTATCCTCCCCCTACAGGTGGTGCATCTGCAGGAGGTCCACCGCCCGCTCCTCCGCAATCTCCTACACCTCCTCCTTCAGCATCGCAAGACTACTATCGACCACAAGGCCCTGCCGCTCCACCACCACCCCCACATTTACAACAGCACGAGGGCTATGGAGGTAATAAAGCAATGCCACCTCCAGCTGGACAACCTCGACGGCATCCAGACTTTGCAAAAGATGCTGCACCTCAACCTCCTTACCCTCCACAGAGACCGCAACCTCCTCCTCATCACCAATATGGTCCTTGGGGTAATAATAGTGGGGGTCAGTATCGTGGACAGTTTCCTCCGGCAAGTGGGAACGCTCCTCCAGGTAACCAATGGGGTGGAGCTCCCCAGCGACCACCGCCTGCTCCAGCGCCTTCTACTCCTTGGGGACAACCTTATCCACCACAGGGACAACAGCAACAATGGGGTGCAAATGTAGGAAGTACAAGTGGAGCACCAGGTGCCCCATTAAGACCTGGTGTAACACCTCCGAGACCTGCTGGACCATACCGGCCTGACCATAAACAGTTTCCTATGCCTCCAACCCATCAAGCTGTAAATAAGGTTGGAGCGACGCCTGGAGTAGGAGGAGCAGCACCAAAAAGAGAAATAACTTTTCCCCCTGACAGTGTTGAAGCTGTTACACCAGTGAACTACAAAAGGCGTCGTCTTACTAAAAATGATGTAGCTCCGATAGAAGCTTGGCGCCTAATGATGGCACTCAAATCGGGTTTACTTGCTGAAACTTGTTGGGCCCTCGATGTTCTCAACATCTTGCTCTTTGATGACTCTTCTGTTGGATATTTTGGACTTCAACATTTACCTGGCCTACTTGATCTTTTGTTGGAGCACTTTCAAAAGAGTCTTACTGATATTTTTGATTCTCCGAATGCCACTGATGATATGCCATGGTACTTACCGAAAGTAGAAGTAGAAAAATCAAAAGAATCTACTATACCTCTTAGTCGAATTCCAGATCCTAAGCAATCTGTATCTTTAATAAAGGGAGAGAATTTTACGAGTGAATCGCGCAAAGGAAAACCGGTTATATATAAATCAAAAGAAGACGATCTCTTTGCTCCAGATGAAAGAGAGTGGGATTCAGAAGCCGAACAAGTCGAAGTAGGACTTGAGCCATGGCAATTTGGTTCTGATACTTCTTTCATAAACCATGTGATGCCATGCTTTCAAGGAGAATTTATCAACATTCCTTTTGCTAGAGTGTTAGAGCGAGTAGAACGAAAAATCAAAAAAGAAGATGTCGAGTGTAAAAGTGAAAATTTGTCAACCGAATCCAACAATAATAAAGACTCTCAAGGTGTTAATAAAAAATCTAATGGTGTCAGTGAAAAGAAAAATAAAAGGACAAAACCCACATTAGCGGAAGTATTGAATAGGGTTAAAAGTCAAGTGAGTGTGAATGGTGATAACAAAGTAAACGGGGAAAATGATGTAGGGACCAATGATGAAAATGTCGAATCCAAACCACCTGCCCAAATTCAACAGAATGGACCTGCAGATGAATCTGATTGTGTTGAATCTTCTAGCAAAGATGGAACAGGTTCTGAAGATAATTTCAAATCTGAACCTATGGAAATAGAAAAAGATGAAAAAATAGTAGATAAGCCTCTTGAAAAGAAACCTAATTTAAAAATAAACGATCCAGCTGGAATCCTTAAAAGAAAACATTTTTCGGATTACGAAGACGAGTGTTATACGAGAGATGAAGCTAGTTTATATTTAGTAACCGAAAGTCAAGATGCATTAGCGAGACGTTGCATTTGTTTATCTAATATATTGCGAAATCTTACTTTCGTGCCTGGTAATGAGACAGAATTTTCTAAAAGTGGAACATTCCTTGCCTTAATGGGCAAATTGCTTCTTCTTCATCACGAACATCCAGTTCGAGCTCCTCGGACGCGAAATTACGACAAGGAAGAAGACGCAGAATGGAAAAGTAGTTGTTCATCATTACAAATTCAAGAATGGTGGTGGGACTTTTTAGCACAGTTACGAGAGGATGCTCTCGTTTGTTGTGCAAATATTGGTGGACAAGTAGATTTAGGACGTCATCCAGAGCAAGTCGCCCGGCCTGTTCTGGATGGGTTATTGCATTGGGCCGTCTGTCCTTCTGCCGGAGCACAAGACCCTTTGCCTGCACTACCTCCTCATCGAGCTTTATCTCCGCGTCGGCTTGCTCTCGAAGCTCTCTGTAAACTATGTGTCACAGACTCAAATGTAGATTTAGTAGTTGCAACGCCGCCCTTCCCACGATTAGAGCGACTTTGTTCTGTATTAGCAAAACATTTATGTCGTAGTGAAGATCAAGTACTCAGAGAATTTTCAGTTAATTTATTACATTATTTGGCTGCTGCAGATTCTGCCATGGCTCGTACTATCGCCGCTCAGAATCCTACAGTTTCACTTCTGGTCGCATTCATTGAACAGGCGGAACAATCAGCTTTAGGAGTAGCCAATCAGCACGGAATAAGTGCATTAAGAGATAATCCCGACTCAATGGGTACCAGTTTGGACATGCTGCGTCGTGCTGCCGGTACTCTCTTACATCTGGCTAGACATCCTGATAACAAACCGTTATTCATACAACAGGAGCAGAGATTACTCTCTTTGGTCATGAGTCAAATTCTAGATCAAAAAGTAGCTGCTGAACTTTCTAAGGTGCTATTTCAGTGCTCCCGACATCCACGCCATCCTAACAGGAGTGATTGA
Protein Sequence
MSPAVGNYSPRPPYPSQGYGPGAGGGGPGAGGPGAAAGGQYGGPGRPQYPPYGAGWGGAGARPPPPPPHYLKQQHLQHKLGPQHMGPPPSHHVMGPPGEPAQDNGLPGPPPAPATALVTTGPDGAPLDDGSQQSTLSNASAASGEETPCGTTRGSGRGPGGGAPSPGAASHASGHDDYDASSSSWPRTPSSPVFNSHVPQETYRTKQKSDSLGKLYEMDESPERRGWVERLLTFMEERRTPIAACPTISKQPLDLYRLYLLVRERGGFVEVTKNKTWKDIAGMLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEATTKKKSNKNNSVPSPGSSNSQDSFPGPGGAGGAPAGPTMDGYGPPYTGYPPASQPQQGAYPGQQGYAGYDQYGSPYPPNRPVYPPYGPEQDNRSYPSGGGAAGSDPYGRYSGGYAGAGRGYPPPTGGASAGGPPPAPPQSPTPPPSASQDYYRPQGPAAPPPPPHLQQHEGYGGNKAMPPPAGQPRRHPDFAKDAAPQPPYPPQRPQPPPHHQYGPWGNNSGGQYRGQFPPASGNAPPGNQWGGAPQRPPPAPAPSTPWGQPYPPQGQQQQWGANVGSTSGAPGAPLRPGVTPPRPAGPYRPDHKQFPMPPTHQAVNKVGATPGVGGAAPKREITFPPDSVEAVTPVNYKRRRLTKNDVAPIEAWRLMMALKSGLLAETCWALDVLNILLFDDSSVGYFGLQHLPGLLDLLLEHFQKSLTDIFDSPNATDDMPWYLPKVEVEKSKESTIPLSRIPDPKQSVSLIKGENFTSESRKGKPVIYKSKEDDLFAPDEREWDSEAEQVEVGLEPWQFGSDTSFINHVMPCFQGEFINIPFARVLERVERKIKKEDVECKSENLSTESNNNKDSQGVNKKSNGVSEKKNKRTKPTLAEVLNRVKSQVSVNGDNKVNGENDVGTNDENVESKPPAQIQQNGPADESDCVESSSKDGTGSEDNFKSEPMEIEKDEKIVDKPLEKKPNLKINDPAGILKRKHFSDYEDECYTRDEASLYLVTESQDALARRCICLSNILRNLTFVPGNETEFSKSGTFLALMGKLLLLHHEHPVRAPRTRNYDKEEDAEWKSSCSSLQIQEWWWDFLAQLREDALVCCANIGGQVDLGRHPEQVARPVLDGLLHWAVCPSAGAQDPLPALPPHRALSPRRLALEALCKLCVTDSNVDLVVATPPFPRLERLCSVLAKHLCRSEDQVLREFSVNLLHYLAAADSAMARTIAAQNPTVSLLVAFIEQAEQSALGVANQHGISALRDNPDSMGTSLDMLRRAAGTLLHLARHPDNKPLFIQQEQRLLSLVMSQILDQKVAAELSKVLFQCSRHPRHPNRSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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