Scau011437.1
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- ncor1
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010003465.1:1-2164[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-08 1.8e-05 24.4 0.0 4 43 377 416 375 418 0.98
Sequence Information
- Coding Sequence
- ATGTTGCCACAACTTTACCGAGATTATCGGCCTAATAGAATATCTTTATTACATCCAGAATATGGGACAAGTAGTCGACGAGGAGATATTCCATCATCTGGAGGAGGAGGTGGTGGAATATCATCCCAAGGTGGTATCATCCATATTGATGCAAtaccaccacaacaacaacaacaacaacatggtAGTGGTCAACAACCGATTAAAAAAATCCGTTTACAAGAACATAAAGATAATATACAACCATTAAGAATTGATACGAGGGAACAGCCAGGAATGTATAATCCACAAGTAGAGGCAATATCACCAACATTACCAGATCATTTACAACAAGAAGATCAAGTTTTCCGTACAACAAAAGATGaattaatacaacaaattGGTAAAGTTGATCGTGAAATAGCAAAAGCCGAATCACAAATTGctatattaaaaaagaaacaacaagaattagaagaaataGCAAATAAACAACCATTAATTAAATCAGAAATTGAAGATCAAGACCAACAACAATTATCTAAAAAACATCAAAGTTTACCACAAAAAATTTATGCAGAAAATCGTAAAAAAGCAGCAACAGCCCATTCAAAATTAGATCATTTaggtacaaaaattgaatggCCATTATATAATCAACCAAGTGATACAGTTATTTATCATGAAAATAAACGTAAACATTTAGCATTCAAAAAACgtttattagaatattttaaACGTAGACATATTGAAAAAGATACACGTAATACATATTTAACAGAAACATATAGTAAATTAATGCAAGAATGGTTACGTaaagttgataaaattgaagctAGTTCGAAACGTAAAGCGAAAGAAGCTAAAAAtcgtgaatttttcgaaaaagtcTTCCCCGAATTACGTAAACAACGCGAAGATAAAGAGAGatTCAATCGTGTCGGTGCTCGTGTTAAATCCGAAGCTGATATGGAAGAAATAATGGATAATTTACAAGAACAAGCATTAGAAGATAAAAAGATGCGTAGTTATGCTGTAATACCgccaattttattcgattcaaAAGAACGTAAAATTAGTTATCAAAATGATAATGGTTATATTGATGATATGGAAGAAATTTATAAACGTcgacaatttttaaatatatggACACCAAGTGAAAAGGATTTATTTAAAgagaaatatttacaacatcCGAAAAATTTTGGTGTTATTGCATCATTTATTGAACGTAAATCAGTAGCTGATTGtgtacaatattattatttaagtaaaaaaactgaaaattataaacaattattaagaAAATCAAGACAAAGAACTAGATCATCAAGAAATAATACACAAAAAGTTAATAGTAGTGCTAATACATCAGTTGTTGATATATTAACAACAGGTGTTACAACACGTCTACAAcgtgaacaacaacaaaaaactgtTGTACAACAAAATcgcgaacaacaacaatcatcatcgtcattatcatcatcatcatcgtcgtcatcatcggaatcaacaattttaccaACATCCGtcccatcaacaacaacaacattatcatcaataagtactgccacaacaacaacagcaataacGCCATCTATTAGTGGTATTGCAACACAAACTGTAACTGTtttaacaacatcaacaacaacaacatcgaatAGTGTGATCtccagtaataataataataataataatagtaatagtggTACACCGGTAGCTTCaataacagcaacaacaacaacaaataatagtGGTGGTGTTAATAATCAACCACAATCACCAAAACCTGGTGATAATGCATAtgaacataataataatcgtaattttaatgattataataatttattaattgatgatgaacaaaaaacaacaacaacatcaattacaacaattgcaacattaacaacaacaacaacagcaacaactacaacaac
- Protein Sequence
- MLPQLYRDYRPNRISLLHPEYGTSSRRGDIPSSGGGGGGISSQGGIIHIDAIPPQQQQQQHGSGQQPIKKIRLQEHKDNIQPLRIDTREQPGMYNPQVEAISPTLPDHLQQEDQVFRTTKDELIQQIGKVDREIAKAESQIAILKKKQQELEEIANKQPLIKSEIEDQDQQQLSKKHQSLPQKIYAENRKKAATAHSKLDHLGTKIEWPLYNQPSDTVIYHENKRKHLAFKKRLLEYFKRRHIEKDTRNTYLTETYSKLMQEWLRKVDKIEASSKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARVKSEADMEEIMDNLQEQALEDKKMRSYAVIPPILFDSKERKISYQNDNGYIDDMEEIYKRRQFLNIWTPSEKDLFKEKYLQHPKNFGVIASFIERKSVADCVQYYYLSKKTENYKQLLRKSRQRTRSSRNNTQKVNSSANTSVVDILTTGVTTRLQREQQQKTVVQQNREQQQSSSSLSSSSSSSSSESTILPTSVPSTTTTLSSISTATTTTAITPSISGIATQTVTVLTTSTTTTSNSVISSNNNNNNNSNSGTPVASITATTTTNNSGGVNNQPQSPKPGDNAYEHNNNRNFNDYNNLLIDDEQKTTTTSITTIATLTTTTTATTTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566183; iTF_00841789;
- 90% Identity
- -
- 80% Identity
- -