Scau008413.1
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- SNAPC4
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010001290.1:2868-5372[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 7.8 5.4e+03 -2.7 0.0 3 16 181 194 180 196 0.83 2 6 0.00048 0.33 10.8 0.1 22 45 261 286 255 287 0.89 3 6 3.1e-08 2.2e-05 24.2 0.7 1 43 293 337 293 338 0.96 4 6 1.4e-12 9.6e-10 38.1 0.1 2 46 347 395 346 395 0.97 5 6 1.5e-09 1e-06 28.4 0.0 1 46 402 447 402 447 0.97 6 6 2e-07 0.00014 21.6 0.1 1 45 453 497 453 498 0.94
Sequence Information
- Coding Sequence
- ATGGATTCGGACGATAATAAAACAGATGTGGCGaaattaattgcaataatcaatcaacatAAAGTTGAAATAAGCGAggaaataCAAGATGAATTTGGagatttcatcaatttcgatcACAATCTAGAAGAAGACGTATTATTCGAAGATTCTGATacggaaattgaaaatttcattggtTCCGATCAGCAACAAgagaacaaaaattatttaaccGAACAAGAACTTGAGCTAGTCGAATCGTGTCAATTGCCCGACTTAAAACAATTACTCACATTAAATCGttcgaaaatcttcaaattgatGCAATTACGTGCCTATATCACCGAATTATTGGAAGAATGCGATCAAAATTTGAGCCAAATCAGTATTAATTCCATAAGTTTCAAATTAATACATCCATTAAAATCACCTGTATGGAAATTGGGAGCGCCATATTTTAAATGtaaagattattattttagtccTTTTAATGATGATGTGAAGAAGAAACAATCGAATCATGAGTTATTATTGCatgatttattatatgaaCCGAAACATTGGACGAAATTAGAATGTAATAATCTATTAAATGGTGTTTTGACTAATTACAGTATCAATAAACAGACTAATTTCAATAAGGAGATTATTAgtctgaaaaaaattattgattcatcGGATGATGTGGACGAgaattatcgtttatttttgaaaattcaagatttagaaaatcaaatgGAAAAACTCAACAAACCAAACAAAAACGAACTACCAGTTTTAAATAGTAACGAATTTATTGACTGGAATAAAGTTGCCGAATCTTTCTTCAATgaTAAAAGAACGGCGGAAGAATGTCGTGCATTGTGGCATATTTATTTACATCctaatataaataaagaatCATGGTCGAAGAAGGAGAATGATAAATTAAGGAAATTAGTAAAGAAATTTAAGTATCAAAATTGGGAAATGATAACATTAGAATTGGGTAATAATCGTTCAGAATTTACAGTTGCTCTACATTATTATCGTGATTTACATGATAAATATCTCCATacgaaatttacaaaacaagaagatgaattattattggaattagtCGATTTATATCGTATGAGCGATTTTATACCATGGCGTAAAATAgctgaatatttcaataaacgtTCACGTTCCCAATTATATCATcgttataaatattatttatctgagaatgatttgaaaaaaggTAAATTCTCTGATGCTGAAgatatattattgttggttttagTTGATCGATTCGGTTGTGATTTTCGTAAATGTTCAAACTATATAAATAATCGTAGTTTAGTACAATTGAAAAGTCGTTATCgacaaaatttagaaaattataaacgtAAAGGCACATTTACAGAAGATGATGATAACGAAATATTGAAACATGTAGAACAATATGGTGAAGGTTTTTGGGGTATTTTgagtagaaaattgaatcgcACCAGAGGCACATTGAATCAACGCTatcaaacaattaaaacattCCTCAAAAAACAGCCAACTgcgaaaattgaagatttaccGAAACGTAAACATCGCGAATTGATGAAACAACATAAACATTACGAATTTATACGATATGTTGCtgataaatttaaaacatATCAAGATATACCGACTTTAGAAATGATAGAAGAATTTCTACAAAATTCCAACACTCATAACGATAATGATAgcgatgaagatgatgataatgcaAAGAGAACAAAACgtattaataacaaaagaaataataataaaaatattgatacaaTGTTGACGGATTTCTTTGCGAATTCTTGCAACATTAAACAACACAcAGAATTGTTTATGGAACGTTTCCAGAAATTATTTACCTGGAGCTCGATTTTATCGCTCGAACAACCATCGGATCCGGACAATTTCGAGCCATTAACGAAAAAaaggaaaatagaaaatttgaaaacgtATTCTCGTAAAAATGGCGATGTAATCAAACCATCAACAAGTGACCTATAA
- Protein Sequence
- MDSDDNKTDVAKLIAIINQHKVEISEEIQDEFGDFINFDHNLEEDVLFEDSDTEIENFIGSDQQQENKNYLTEQELELVESCQLPDLKQLLTLNRSKIFKLMQLRAYITELLEECDQNLSQISINSISFKLIHPLKSPVWKLGAPYFKCKDYYFSPFNDDVKKKQSNHELLLHDLLYEPKHWTKLECNNLLNGVLTNYSINKQTNFNKEIISLKKIIDSSDDVDENYRLFLKIQDLENQMEKLNKPNKNELPVLNSNEFIDWNKVAESFFNDKRTAEECRALWHIYLHPNINKESWSKKENDKLRKLVKKFKYQNWEMITLELGNNRSEFTVALHYYRDLHDKYLHTKFTKQEDELLLELVDLYRMSDFIPWRKIAEYFNKRSRSQLYHRYKYYLSENDLKKGKFSDAEDILLLVLVDRFGCDFRKCSNYINNRSLVQLKSRYRQNLENYKRKGTFTEDDDNEILKHVEQYGEGFWGILSRKLNRTRGTLNQRYQTIKTFLKKQPTAKIEDLPKRKHRELMKQHKHYEFIRYVADKFKTYQDIPTLEMIEEFLQNSNTHNDNDSDEDDDNAKRTKRINNKRNNNKNIDTMLTDFFANSCNIKQHTELFMERFQKLFTWSSILSLEQPSDPDNFEPLTKKRKIENLKTYSRKNGDVIKPSTSDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -