Scau010589.2
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- ct
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010002411.1:1-8346[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.7e-28 2.4e-24 84.8 0.0 3 72 242 312 240 317 0.95 2 3 1.6e-32 5.8e-29 99.6 0.0 2 77 637 713 636 715 0.96 3 3 6.7e-31 2.4e-27 94.4 0.0 3 75 883 956 881 960 0.95
Sequence Information
- Coding Sequence
- GTTGCCGCACAACCGGACGCACCCCCATCTAACCCACCCTCCACCAccactacaacaacaacaacattaccGCATCCCTTTCACAATGTCGAAACTTTCGGTAGTATGTTAGGTGAAGAGATTGTTGCAAATTGGCGTCgtaatattgaacaaatttccTTAAATAACCGATCACCCTCCTGTATAGATGCAGTGGCggcgacaacaacaacaacaacaaccacaacaacaacaactacaacaacaacaacaacgaatacCATCACAATGCCAATCAAATCATCAACACCAATGACTGAAGTGATCGAGAAATCATCACGTGATTCACCAACAAATGATCTCCTAtcacatcatcaacaacaacaacaacaaagaaattCACCACAAATAGAACCGTTAATTAATGGAAATCCGCGAAGTCCAGATGATCACAATAATCACcatcacaacaataataataataataataataatattccgATAACAGCGGCGACAATGTGTGCAATGAACAATTTCCTACGTACAAATGATGAAGTCCAATTGAAAAGTCCATATCGTTTCGATGATCATCATCGATCACCATTTCGTTTTGCTGATGATTTAGGTATTGGACCACCTGGTTCGATGGTAGGACGTTTAGGTGAAAGTCTAATACCGAAAGGTGATCCAATGGAAGCCCGTTTACAAGAGATGTTACGTTACAATATggataaatattcaacacaaaatttggACACATTACATATAGCTAGACGTGTCcgtgaattattatcaatacatAATATCGGTCAACGTTTATTTGCTAAATATGTTTTGGGCTTATCACAAGGTACTGTATcggaattattatcaaaaccgAAACCATGGGATAAATTAACAGAAAAAGGACGTGACAGTTATCGTAAAATGCATGCATGGGCATGTGATGAACAAgctgtattattattgaaatcgttAATACCGAAAAAAGACAATTTTTCCTCAGGCAAAGATACTAGTATGCCTCCAACATATGGACGTcctaatgataatgatttaacAGAAGAACGTATAGCCCATATATTAAATGAAGctaatcaatttcaacaaatgaaaacCAATCATACAACACCATtgttaacaacaacaacaacaacaataacaacaccaGGTACTATTATAGAAGATAGTCATAGTAATGATGATTCGAAATCACCGCATGGCCAATGTTTGAGTCCATTTTCGAGGGATTCATCGCAAAATCGCCGATTGAAGAAATATGAAAACGATGATATACCACAAGAGAAGGTCGTCCGGATTTATCAAGAGGAATTGGCGAAATTGATGGGTCGACGAATGGACGATGTACGGAATCCGCGTGATACAACATTTCCTAGTATGTTCTTTCCGCAATTGTTTAGTAGCGGCCAAATGGATCGTACACAAGAAGAGATACGTATAGCCTTAGATGCATATCATAGGGAGAttgttaaattgaatcaagGCCAAAATAGTGGTCAAATACCGAATTTGGGCTTATTAGCTTTACAACAACAAGCCTTAGCACAACATCAAAATCCATCAAATGactcaattaattcaataaatgatgaaaatttacgACATTCCGGTAGTGCGTTTAGTTTAGTCCGGCCAAAAATTGAACCTggtatacaacaacaacaacaacaacaatcaggAGGAGGTAGTGGCTCAACAGCTTCAAGTCCTTTAAGTAACACAATTCTACCACCTGCAATAACACCAAATGATGATTTTACTGGTTCAACAGTAGCTAGTCCATTACAACGTATGGCATCTATAACGAATTCGTTAATATCACAACCACCAAGTCAACCACATCATACATCATCACAACGTCCATTAAAAGCTGTATTACCACCaataacacaacaacaattcgatcaatataataatttaaatacagAAGATATTGTTAAAAAAGTTAAAGAACAATTAagtcaatattcaattagtCAACGTTTATTTGGTGAATCTGTATTAGGTTTATCACAAGGTTCTGTTAGTGATTTATTAGCTAGACCGAAACCATGGCATATGTTGACGCAAAAAGGCCGGGAACCATTTATTAGAATGAAAATGTTTTTAGAAGATGATAATGCTGTACATAAATTAGTAGCAAGTCAATATAAAATTGCACCAGAAAAATTGATGCGAACTGGTGGTTATGGAGGCGGTAGTAGTATTGGTAAACCAATACCACCAACCCCTAAAATGTTGAGTGATGCTGCTACAGCTGCTggtttaataaataaaatgcaagaaaatcaaaatttattaccaCCTTCATTACAATTAGGACcacctacaacaacaacaacaacaacaacatcaatacctcaacaacaacaacaagttgTTATAAGTGGTggtccaccaccaccaccaccaatgTTATTAACACCACCTGGTCTACCACCACATCAtgttattaatttacaaaatcaggaattattgaaaaaatcaaatccaaGTCCGcatagtagtagtagtagtggtgGGGGTAGTAATAGTGGTGGTACAAGTGGTTTACCATCACATTCACCAATATCACAACATCAATTATCATTAAGGAATATGCATCAACATATGTCACCGAGTGTTTATGAAATGGCTGCATTAACACAAGATTTAGATACACAAACTATAACGACGAAAATTAAAGAGGCCCTATTGGCCAATAATATCGGCCAAAAGATCTTCGGTGAGGCAGTTTTGGGTTTATCACAAGGCTCCGTCagtgaattattatcaaaaccgAAACCATGGCATATGTTAAGTATAAAAGGTCGGGAACCATTTATACGTATGCAATTATGGTTGAATGATGCCCATAATATTGATCGTTTGCAAGCATTAAAAAATGAACGTCGTGAAGCAAATAAACGTCGTCGTAGTTCTGGTCCTGGTATACATGATAATAGTTCTGATACATCATCAAATGATACATCGgaattttatcattcaaattcacCAGGACCAGGACCAACATCAGCTAAAAAACAACGTGTTTTATTTAGTGAAGAACAAAAGGAGGCATTACGTTTAGCATTTGCATTAGATCCATATCCGAATGTGgcgacaattgaatttttagctAGTGAATTAGGCTTAAGTAGTCGTACAATAACGAATTGGTTCCATAATCATCGGATGCGACTTAAACAACAAGTACcacataacaataataacaataataataataatagtaatagtaataataataataataa
- Protein Sequence
- VAAQPDAPPSNPPSTTTTTTTTLPHPFHNVETFGSMLGEEIVANWRRNIEQISLNNRSPSCIDAVAATTTTTTTTTTTTTTTTTTNTITMPIKSSTPMTEVIEKSSRDSPTNDLLSHHQQQQQQRNSPQIEPLINGNPRSPDDHNNHHHNNNNNNNNNIPITAATMCAMNNFLRTNDEVQLKSPYRFDDHHRSPFRFADDLGIGPPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEQAVLLLKSLIPKKDNFSSGKDTSMPPTYGRPNDNDLTEERIAHILNEANQFQQMKTNHTTPLLTTTTTTITTPGTIIEDSHSNDDSKSPHGQCLSPFSRDSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMDDVRNPRDTTFPSMFFPQLFSSGQMDRTQEEIRIALDAYHREIVKLNQGQNSGQIPNLGLLALQQQALAQHQNPSNDSINSINDENLRHSGSAFSLVRPKIEPGIQQQQQQQSGGGSGSTASSPLSNTILPPAITPNDDFTGSTVASPLQRMASITNSLISQPPSQPHHTSSQRPLKAVLPPITQQQFDQYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGGSSIGKPIPPTPKMLSDAATAAGLINKMQENQNLLPPSLQLGPPTTTTTTTTSIPQQQQQVVISGGPPPPPPMLLTPPGLPPHHVINLQNQELLKKSNPSPHSSSSSGGGSNSGGTSGLPSHSPISQHQLSLRNMHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGIHDNSSDTSSNDTSEFYHSNSPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQVPHNNNNNNNNNSNSNNNNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01366224;
- 90% Identity
- iTF_01366224;
- 80% Identity
- iTF_01366224;