Scau006554.1
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- ARID5B
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010000804.1:12456-20850[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.46 6e+02 0.6 0.0 37 52 123 138 119 162 0.85 2 2 1.4e-25 1.9e-22 79.2 0.1 1 89 233 319 233 319 0.94
Sequence Information
- Coding Sequence
- ATGAAGTTGTGGGATTATGAGGGAGTTGTCAAGgaTGAAGTTTTGGCAATTTCTGAAAAAGTTGTTTTACGTGTTGAAGATTTAATAACATGGATAACATTAGATGCGGAATGGACATGGGGTAGATTAGCTAAATGTGAAAAAGATGTCAAAGATGTACCAgaacaaattgatgaaaataaattgataagcAATTCATTAACTGATAGTTCATTGGATTTTTCCGATGTTGATAAAGAACGTAAAACTCTAGatcaTATTACAGAACATGATGGACCATTAGTTGTGATATTGAGTTATGCACGTTATTGTCGTTATAGGGCTATGATGAGTCGTTTAGAAGGTGTTGaagatgaatttttgaaatataaaattgtaactGCATTAGGTGGTTTTACATCATGTACAAAAAATACACgtgtattattttgtaaagaTACATTCGATTATCCAGAATTGGAAGGTCATGAATTATTATGTAATCATTTAGCACCGAAATTAAAAGGACGTCCACGAGGTAAACGGAAAAAACGTAGTCTATCACCTGGTTCTGAAAGTAACGAATCAGAAGaatcaacatcaattgtttcaaatatagtttttacaaatattccagAGAAAATCACAGCAGAAGGTCGAAATGGTTTACGTTGTGATACAAGTTTGAGACGTAGCGCTAGATCGAtagaaaataacgaaaataaagAATTCTTAAAAGAATTGagtatatttatgaaaaaattttatacacCAATTGGGAAAATACCCTCTTTAGGATATAAAgaaattGATCTCTATTCGTTTTATACAAAAGTCCAAAAACTTGGTGGTTATGATTCAGTAACAGCGAATCGTTTATGGAAATCCATTTTCGATGATATGAGCGGCCATCAAAATAGTACAAGTGCCGCCACTGTTATCCGTAGACATTACGAAaggTTTCTTTTGCCATATGAACGTCATATTAAAGGTGAAGATTATAAACCTTTACCAGTGTCGGAACGACGAAGATTAAAAAGTAAAACTGGCAGTAGTACTAGTGATGCTGAAACAAGTGAAGGTACATCTAGAAGTGGTAATAGTACACCAATACCACAAACACCAATCACaccaattgaaaataaagaatttaatattcaaataaaaactgaaAGTAAAACGTCATCGTTACGTAGTGTTCGAGTCAAATCTGAACGTCAAAAAGAGAAAcaaactgaaaaattgaataataataataataatattgaatcaaataataatgagacaaatgaaattattattaaaaatgaaactgaaattgaaccagaaaaaattgaagacaatccaataacaaataaagaaacattaataaaatctgaaaatattccaatgaAACTTGAAAAAGATATTGAACCGTTAACATCAGCAATTGCAccaattgtacaaaaattacCACCGGAAAAATCACCATCACCAGTTGAAGGTAAAGAAAATATATTACCAACAATGAAAACTGGCGATATACCGAATTGTGATGAATGTAATAAAAGTCCTGATATTATCGAGGTGCCATATaaaccatcaccaccaccacaaccaTCGAAACCGGAAccggaaattatcgatttagaAAGTACGAATATCGATGAGAcatttttaaatgaaatgaaaaaaggTAAATTGGATATTTTAAAAGAAGGTGGTTTAGAAGTGACACCTGTACGGACATTTATTCCAccattatcaataacaaaagaattacGACCAACGGTCATACAACCGACTGGTGTACAAATTACATcatataaaaatgatatacAACAAATGCCACCACCTACATCTAtatcttcaacaataatccCTCCAAAATTTGCATTACCTCAAGCATTAAATGTGAATCaattaacaaatcaacaaaataataaaacacaaactccgcccaataaaaataataataatagtaggaAATTACCACATTTGAATGGTAGTAATTTACCACCAAAAGTTGTacaatcaaaatcgatttattcttATTCGGAAAAGACAGTTTATGGTAATCCGAAAGACTTTAATTTACCAccgataacaacaaaattcataGAAACTCCTCCTACTCCACGACAATTTCATAGTGATATTTTAGATTTAAGtaaaacaaattcgaaaagATCATCAATAGAAATGATGAAAGTACCAAATTTGATTagtcaaaatcaaaaacaaaattatattaatttaaataataataataatagtaataataataataataaatatcattataatcatttattagATGGTAGACGTTTAGGTTCTAATGTTGAAATAACATTAGTTGGTTCAAATTCagctaattataataataaatcgaatcaaaatcaatcaaataaatataatttaccaCAATCATTACCACCGACAAATTACCATACGAATCGTTATCCACAAAAACGGCCATCTAGTGAGATTTACATGAACCATAAACTACCacgattaaataataataattatagtaataaatCGAATACATTACCGCATGGATTACCGCATTCAAGTAGAGAGATCAAACAACATACCGATATACAATCacatttctataataatcataatttaaaacatgattataattcattaatGAAAGTCAATTTACCAccagcaccaccaccaccaccacctacATTACCGCATAATCCTAAACCATCAACATTCATCAAACCATCACCACCATTACCAATACCATTATCGACACCATCAACTTTACCACCgtatttatcacaattatatGATAGCGGTGgtggtaataaaaatttaccacCGTATATGCCATTTTTAgatccaatttattatttatattcacaaCATAATACACCACCAACAACACCATTATTACCATTTCCATCTacagaacaattgaaattatatagtGATTTGATGGTACGTAATTCACgtttaaattttccatatcCAATCAATCCAAATgatcatcatttaaataacaataataataataataataataataacaataatagtaataatagttcaataatgaataattataaaaaacattag
- Protein Sequence
- MKLWDYEGVVKDEVLAISEKVVLRVEDLITWITLDAEWTWGRLAKCEKDVKDVPEQIDENKLISNSLTDSSLDFSDVDKERKTLDHITEHDGPLVVILSYARYCRYRAMMSRLEGVEDEFLKYKIVTALGGFTSCTKNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSLSPGSESNESEESTSIVSNIVFTNIPEKITAEGRNGLRCDTSLRRSARSIENNENKEFLKELSIFMKKFYTPIGKIPSLGYKEIDLYSFYTKVQKLGGYDSVTANRLWKSIFDDMSGHQNSTSAATVIRRHYERFLLPYERHIKGEDYKPLPVSERRRLKSKTGSSTSDAETSEGTSRSGNSTPIPQTPITPIENKEFNIQIKTESKTSSLRSVRVKSERQKEKQTEKLNNNNNNIESNNNETNEIIIKNETEIEPEKIEDNPITNKETLIKSENIPMKLEKDIEPLTSAIAPIVQKLPPEKSPSPVEGKENILPTMKTGDIPNCDECNKSPDIIEVPYKPSPPPQPSKPEPEIIDLESTNIDETFLNEMKKGKLDILKEGGLEVTPVRTFIPPLSITKELRPTVIQPTGVQITSYKNDIQQMPPPTSISSTIIPPKFALPQALNVNQLTNQQNNKTQTPPNKNNNNSRKLPHLNGSNLPPKVVQSKSIYSYSEKTVYGNPKDFNLPPITTKFIETPPTPRQFHSDILDLSKTNSKRSSIEMMKVPNLISQNQKQNYINLNNNNNSNNNNNKYHYNHLLDGRRLGSNVEITLVGSNSANYNNKSNQNQSNKYNLPQSLPPTNYHTNRYPQKRPSSEIYMNHKLPRLNNNNYSNKSNTLPHGLPHSSREIKQHTDIQSHFYNNHNLKHDYNSLMKVNLPPAPPPPPPTLPHNPKPSTFIKPSPPLPIPLSTPSTLPPYLSQLYDSGGGNKNLPPYMPFLDPIYYLYSQHNTPPTTPLLPFPSTEQLKLYSDLMVRNSRLNFPYPINPNDHHLNNNNNNNNNNNNNSNNSSIMNNYKKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -