Scal034661.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Stenodema calcarata
Gene Symbol
nfxl1
Assembly
GCA_963920205.1
Location
OY986061.1:2058210-2069455[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.6 3.6e+04 -3.8 3.2 14 19 165 170 165 170 0.87
2 20 0.063 1.4e+03 0.7 0.5 4 10 201 207 200 207 0.96
3 20 8.5e-08 0.0019 19.5 16.7 1 19 215 232 215 232 0.99
4 20 1.4 3e+04 -3.6 0.9 5 10 257 262 257 264 0.79
5 20 1.7e-07 0.0036 18.5 14.7 1 19 268 286 268 286 0.93
6 20 0.57 1.3e+04 -2.4 0.9 5 10 310 315 310 315 0.94
7 20 6.3e-10 1.4e-05 26.3 14.5 1 19 321 339 321 339 0.99
8 20 3.6e-06 0.078 14.3 13.5 3 18 376 391 364 392 0.87
9 20 0.5 1.1e+04 -2.2 0.3 1 5 401 405 401 405 0.93
10 20 1.5e-06 0.032 15.5 15.0 1 18 426 443 426 444 0.97
11 20 2.8e-10 6.1e-06 27.4 13.6 1 18 453 470 453 471 0.97
12 20 0.59 1.3e+04 -2.4 1.0 5 10 499 504 499 504 0.94
13 20 6.9e-05 1.5 10.1 7.1 9 19 519 529 517 529 0.90
14 20 0.0012 25 6.2 5.9 1 12 538 548 538 548 0.96
15 20 0.62 1.4e+04 -2.5 4.9 14 18 575 579 575 580 0.92
16 20 2 4.4e+04 -4.2 0.4 9 11 597 599 597 600 0.73
17 20 0.0022 47 5.4 2.7 1 11 616 626 616 627 0.97
18 20 0.0047 1e+02 4.3 17.7 1 19 654 671 654 671 0.93
19 20 2.7e-07 0.0058 17.9 10.8 1 16 718 732 718 738 0.89
20 20 0.97 2.1e+04 -3.1 0.1 8 11 754 757 753 760 0.74

Sequence Information

Coding Sequence
ATGTCTCAACGAAATCGTGGTAACCCGTGGGGGCAGGGGGccaacaacaaaaagaaaacgTCCGTCAACCCTCCGGCGACCGCTGCCTCTGCCATAAAATCTGCCGAAGAGAGATTCCGCCAAGCGCAGTCCATGCTGCAGAAGTCCGTCCAGAAACACCTCGAGCAGGAATTGGACCTTTCATCTGAAGAAGAGGATCTGGAGACCGATAGTATTTATGATTCTGTTATAAGGAACTACTCCCAACTAGGAGGTAAAAATGAAGATCttggaaaaactcaaaatttcctCGAAAACATCTTCAACTCTGACGTCGCCATCTGTTTGATCTGTATTGGGACAATTAAAAGAGCCGAATCCATATGGAGCTGTTGTTCATGTTATGGTTTCTTCCACCTGCTTTGCATCCAAAGATGGGGCAAGGACAGCATCGCCCATCAAAAGCTGGCGGATGAAGAGAGATTGGCTACTTCCAAAAAGGAGTATTTATGGCCCTGCCCAAAATGCAGGAAAAATTACACACCAGAAAACATTCCTCAACGTTACGAGTGTTTCTGCAGCCAGGTCATAGATCCACCATTCCAGCCTTGGCTCGTTCCACATTCCTGCGGTCAAGTGTGTGGCAAAAACTTGGTGCCAAGCTGCGGGCATTCATGCCTTCTGCTATGCCATCCAGGTCCTTGTCCACCATGCCCAAAAATGATCAAAGCCAAGTGCTACTGTTTGAACGGAGGCGACAGGATGGTGAGGTGTTGTTACAAAGAGTGGACCTGCGGGCAGAAGTGCAGCAAGACCCTCAGTTGTCAGAAGCACAAGTGTGAAACGGTTTGCCACCCTGGCGATTGCCCTGCTTGCCCCAAAACATCAATGATGACCTGCGATTGTAAAAGGCAAACAAGTCTGACACTTTGTGCTGAGCTATCTTGGAAATGCGACAAGGTGTGCAGTAAGTTGTTGGACTGTGGTAAGCACAAATGTGATCTTGTCTGCCACAAAGGCGACTGTGGACCATGTCCTCGTACTCTGCCCAGGACGTGTCCCTGTGGTGATGAAGAAACGGTCATCCCCTGCACACAGGAGGTCGCCACCTGTGGCAACACTTGCGGCAAACTGCTTGACTGCCGCCTGCACACGTGCAACCAGCGGTGCCATCGGGGGCCATGCGGCGACTGCATGGAGTTCCTCGAAAAGACCTGCCGCTGCGGTCTACACAAGAAAGAAATAGCGTGTATCAAAGAGTATCTGTGTGATACTAAGTGCAAAGGGACTCGAGATTGTGGCATTCATCCTTGCAATAGAAAATGTTGTGATGGTCGGTGTCCTGTCTGTGAGAAACTATGTGGCAAAACCCTTCGGTGTGGTCAGCACAAATGTTCCTCTGTCTGTCATCGTGGCCCCTGCTACCCGTGCGAGCAAACCAAGCAGATATCCTGTAGATGCGGATCAACGTCGGTAACAGTTCCATGTGGAACACAGCGGAAGAAGGCAATTTTGAAGTGTAATAAGTTGTGCATGATTCCTCCAGAGTGCCACCATCCTAAAAGAGAAGACCACAAATGTCACGTGGGTCCCTGTCCCTCGTGCAGACAGATTTGTGATAAACCGCGGGATTGTGGACACTCCTGCCCACTACCCTGCCACTCCTCGGTACTCGTCAATTCAGTTCCCAATTACAAGCCAGCAACGCCTTGGGAGAGAGTGGCGGTGGAAATCAAAGATCTTCCTTGTCCTCCTTGTGTGGTCTCAGTGGGCGTTAGTTGTTACGGCGGTCATGAAGTGATACCCTTGCCCTGTCACCGTGCCACGATTCAGCAGTGTGGCAGGAACTGCGGCCGAATCCTGCCGTGCTCTAACCATGTGTGTGACATTCCTTGCCATCTAGTCACCAACGCTCCGGACGATATGAGTGCTGGAAAGGAGTGCATGGTTTGCAGTGAAGACTGTGAAGCTCCCCGGGACTGTTCTCACGAATGTCCACAGGCTTGCCATCCCCCACCGTGCCCCGAGTGCACAGCAATGCTCAAAATGAAGTGCCACTGCGGCATCACATTCACTTATGTCAAGTGCTGCGAATGGACCTCGCCATCTTTGGATGAGGAGACACGAAGGGAGATGCAATCCTGCAAAAACCAGTGTCCGAAAAACTATCCTTGCGGTCATCGGTGCACGGACATCTGTCACGAAGGCGACTGTCCAGGAGCGACCATGTGCAGGAAGAGGATCAAGATGACCTGTAACTGTAAACGGATCAAGAAGGAGGTCATCTGTCACGTTTCTGGCGAGATCGCCCCTCTTTGTGACGACGTTTGCAAGTTAACCAAAGCACAAATCAATGAGaaAGAACAGAAGGAGAAAGAAAAACTACGTATCCTCGAAGAGAAGCGTAACAAAGAAGAATTGGAAAAGTACGAAAAGAAACTGCAAGGCGCAAAAAGGCACCGGAAGAAAAAGGTCTTAAATGAAGAAGAAactaaaggttttttttcatcaaaagtCTTAGTCATCACTGGCGCCGTTCTGATTGTATCAATCGGAGCATATTTTATTCTTAAATCGTTTTAG
Protein Sequence
MSQRNRGNPWGQGANNKKKTSVNPPATAASAIKSAEERFRQAQSMLQKSVQKHLEQELDLSSEEEDLETDSIYDSVIRNYSQLGGKNEDLGKTQNFLENIFNSDVAICLICIGTIKRAESIWSCCSCYGFFHLLCIQRWGKDSIAHQKLADEERLATSKKEYLWPCPKCRKNYTPENIPQRYECFCSQVIDPPFQPWLVPHSCGQVCGKNLVPSCGHSCLLLCHPGPCPPCPKMIKAKCYCLNGGDRMVRCCYKEWTCGQKCSKTLSCQKHKCETVCHPGDCPACPKTSMMTCDCKRQTSLTLCAELSWKCDKVCSKLLDCGKHKCDLVCHKGDCGPCPRTLPRTCPCGDEETVIPCTQEVATCGNTCGKLLDCRLHTCNQRCHRGPCGDCMEFLEKTCRCGLHKKEIACIKEYLCDTKCKGTRDCGIHPCNRKCCDGRCPVCEKLCGKTLRCGQHKCSSVCHRGPCYPCEQTKQISCRCGSTSVTVPCGTQRKKAILKCNKLCMIPPECHHPKREDHKCHVGPCPSCRQICDKPRDCGHSCPLPCHSSVLVNSVPNYKPATPWERVAVEIKDLPCPPCVVSVGVSCYGGHEVIPLPCHRATIQQCGRNCGRILPCSNHVCDIPCHLVTNAPDDMSAGKECMVCSEDCEAPRDCSHECPQACHPPPCPECTAMLKMKCHCGITFTYVKCCEWTSPSLDEETRREMQSCKNQCPKNYPCGHRCTDICHEGDCPGATMCRKRIKMTCNCKRIKKEVICHVSGEIAPLCDDVCKLTKAQINEKEQKEKEKLRILEEKRNKEELEKYEKKLQGAKRHRKKKVLNEEETKGFFSSKVLVITGAVLIVSIGAYFILKSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00146088;
90% Identity
-
80% Identity
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