Basic Information

Insect: Stenodema calcarata
Gene Symbol: ZNF236
Assembly: GCA_963920205.1
Location: OY986058.1:4795456-4806799[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00043 0.072 14.8 0.9 3 23 171 191 169 191 0.97

2 23 0.0005 0.084 14.6 1.6 1 23 197 219 197 219 0.97

3 23 1e-05 0.0017 19.9 0.1 3 23 226 246 225 246 0.97

4 23 0.007 1.2 11.0 0.0 2 23 253 274 252 274 0.95

5 23 0.32 54 5.8 0.9 1 23 286 309 286 309 0.93

6 23 2.4e-06 0.00039 21.9 1.5 1 23 324 346 324 346 0.98

7 23 1.6e-06 0.00026 22.5 0.2 1 23 352 374 352 374 0.98

8 23 1.8e-05 0.0029 19.2 0.5 1 23 380 403 380 403 0.96

9 23 0.17 28 6.7 5.1 3 23 415 435 414 436 0.95

10 23 0.0005 0.083 14.6 4.3 2 23 517 538 516 538 0.98

11 23 9.5e-06 0.0016 20.0 5.1 1 23 726 748 726 748 0.99

12 23 3.1e-05 0.0052 18.4 0.6 1 23 754 776 754 776 0.98

13 23 2e-07 3.4e-05 25.3 0.4 1 23 782 804 782 804 0.96

14 23 0.0019 0.31 12.8 2.2 1 23 810 832 810 832 0.98

15 23 0.003 0.5 12.2 1.0 1 23 1011 1033 1011 1033 0.97

16 23 0.21 36 6.3 0.2 2 17 1040 1055 1040 1056 0.86

17 23 1.4e-07 2.3e-05 25.8 0.8 2 23 1151 1172 1150 1172 0.98

18 23 0.00079 0.13 14.0 1.7 1 23 1178 1200 1178 1200 0.98

19 23 0.00022 0.037 15.7 0.5 1 23 1206 1228 1206 1228 0.98

20 23 0.0022 0.36 12.6 1.8 1 23 1234 1256 1234 1256 0.97

21 23 0.00028 0.047 15.4 0.3 2 23 1415 1437 1415 1437 0.97

22 23 5.5e-05 0.0091 17.6 0.3 2 23 1444 1465 1443 1465 0.96

23 23 0.079 13 7.7 1.7 2 22 1471 1491 1470 1491 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00043	0.072	14.8	0.9	3	23	171	191	169	191	0.97
2	23	0.0005	0.084	14.6	1.6	1	23	197	219	197	219	0.97
3	23	1e-05	0.0017	19.9	0.1	3	23	226	246	225	246	0.97
4	23	0.007	1.2	11.0	0.0	2	23	253	274	252	274	0.95
5	23	0.32	54	5.8	0.9	1	23	286	309	286	309	0.93
6	23	2.4e-06	0.00039	21.9	1.5	1	23	324	346	324	346	0.98
7	23	1.6e-06	0.00026	22.5	0.2	1	23	352	374	352	374	0.98
8	23	1.8e-05	0.0029	19.2	0.5	1	23	380	403	380	403	0.96
9	23	0.17	28	6.7	5.1	3	23	415	435	414	436	0.95
10	23	0.0005	0.083	14.6	4.3	2	23	517	538	516	538	0.98
11	23	9.5e-06	0.0016	20.0	5.1	1	23	726	748	726	748	0.99
12	23	3.1e-05	0.0052	18.4	0.6	1	23	754	776	754	776	0.98
13	23	2e-07	3.4e-05	25.3	0.4	1	23	782	804	782	804	0.96
14	23	0.0019	0.31	12.8	2.2	1	23	810	832	810	832	0.98
15	23	0.003	0.5	12.2	1.0	1	23	1011	1033	1011	1033	0.97
16	23	0.21	36	6.3	0.2	2	17	1040	1055	1040	1056	0.86
17	23	1.4e-07	2.3e-05	25.8	0.8	2	23	1151	1172	1150	1172	0.98
18	23	0.00079	0.13	14.0	1.7	1	23	1178	1200	1178	1200	0.98
19	23	0.00022	0.037	15.7	0.5	1	23	1206	1228	1206	1228	0.98
20	23	0.0022	0.36	12.6	1.8	1	23	1234	1256	1234	1256	0.97
21	23	0.00028	0.047	15.4	0.3	2	23	1415	1437	1415	1437	0.97
22	23	5.5e-05	0.0091	17.6	0.3	2	23	1444	1465	1443	1465	0.96
23	23	0.079	13	7.7	1.7	2	22	1471	1491	1470	1491	0.92

Sequence Information

Coding Sequence: ATGGGTACTACGGAAATGAGCGATATTGATCTTCAGGATGGTTCTTGTACATTTGCTGCAAACGTAATCGGCACCCAGCTCCTCTTCTCCCTGCCTGAATCAGCTCCTCAACAATCTGgAGACTCCGCAATTGTTTTAGAAAATGGTGTACAGTACATACCGGTTTATTTACAAGAAACTCTCCCGACTAACGTTGTTAGCAGTTACGTCATTGATGATTCACAGCAACTCCCTCTTCTAAATCACAATCGTCAAATAATTCTTACTGAAGAACAAATCGTGACGTTTAACCACGTCACAACCTCTGCAATTCAGCAGAATGAATACGCTCATTTTCTCAGCCTAACAACGGATGAAGCCGCCGAAAATAATGATTTCGATGTTTTGGATAACGGTAGGAAAGCAGCGATCATTGTTGAAAAAGATGATGTTCTAGCCCTCAACGATGCTCCCGCTCCAGTGGTTGATAACGATGCAGTTGATCCTCCGGATAATACTTGCCCTCAAGCATGCGACACCTGCGGTTTAAGATTCGAGTCCAGGAAATTGTTCAAGAAACATATTCTATCTCATTTGCATGAAAAGCCGTACAAATGTCCACACTGCCCTGAATCTTTCAATCACGAGTATAACTACATCCCCCACGTCGCCACTCACAACAAGAAAGACCCGTTTTGCCCTGTGTGCAACAAGAGGTTCAGTCGACTCGCAGGCCTCAAAGCTCACATCCTCATACATCAGTGTGATGATACCCTCCCCTGCCCCGAATGCCTGGAAGAATTCAGCAGCCAGAAACTCCTGGATGCCCACCGCCTTGAACACAAATCAGGCTTTGTGCGGCAGCCGCCTCGCTATCATCACTGCGCCAGTTGTGATGAAAAATTCGTGAGTCGAGCCATCTTGAAAGAACACATCCAGGAAGTGCATAAGCTTAAAATgcccaagaaaataaaaaaaggaagAGGATGCTATGCATGCGAATTCTGTAAGAAGCGATTCGCGAAACCAAGCCAACTTGTGAGGCACAGAAGAACCCACACTGGCGAAAAACCTTTCAAATGTGCGGAATGCGGTAAAGGTTTTGGACAGAAAGGTAGCCTACAGATCCACATGCTCAAACATTCTGGTGAACGACCTTACGCGTGCAAATACTGTTCCTCCCAATTCAGCCAAAAAGGTAACCTACAAGCTCACATGATCCGAATTCACCCTGAAGAGAAAGGCGAAGTGAGGAACCGTCACTGTAAATTTTGTTCCTCCTCTTTTAAAAATATCGTTGGACTCCAGAGCCACATGTCTCGACATCATGGCGTTGTATATTCTTCTAAAAGAGGAAAGTCAATTACGTTCAATGAGATTCCAAGCCGTGATGACGAAATCGTTGTAAATATTGCAATTGATAAAGACACTTCGAATAAAGAGAACGAAGGGAAAAGGGGAGAGAAGGGTGCGGAGTCACCCGGGGTAGAGAGCAGCAATGACGAAGAACGTCCGCCGCCTGTCGAAATCGATCCCAGTGGAAAACATTCCTCTTCCGAAGTCATCAACAAATGCAAACATTGctccaaaatgtttcaaaaacgcGCTGATCTCGTGAAACACCTCAAAATGCACAATGAAGAGAAAAGGCAAAAGACTGAACACGTGTGTGACTGCGGCAAACGTTTCCCGTGTGAGACCAATCTGATGTGCCACGTCCAGACATCTCACGCTGACGGATACACTTGTCAAATTCGCAACAAAATCTGCGAGTCTGTGAAGGACTTGGAACGTCACAGTAAGTGGAAACATGATGTGATTTGCCAAGTTGACGGGAGTGAACAACAGGATTGTGAGCAACTTCTCAACCTGGGATCCCCCCCGCCGCCTGTTACACCGTCTGAATCAACTTCCGTTCCCCCGGAGTCGTCTTCTTCCGTCACAGTCGATCCCAGTTCGAAAATTCTCGATAACATTCCCCTTGAATGCGCCAAACTCCTCATCACTACTGATGGCAACATTGAAGTTATACATGAGAGTGGAATAGAAGAAACAAGTAGAGAAAATCCCAAGTCAGAAGAGACCCAAACACCTATTGCCGAAATTGAAGCTTcaggaagagaagaagaagaacaatacCTCGTGCAAGAAGTCATTGAAGAATCTACCAGAGAGAATGAAGACAACTCAAGGAAGTACAAATGCGACCACTGTAATCTCGCATTTAAGCAGCAAAGTCACTGGAAGACACATTTAAGGATTCATACGGGTGACAAACCTTATTCGTGTGAAGTATGCCACAAGGCATTTTCTGCTAAGAGTGCGATGACGGTTCATATGGGAACGCATGACAGTGTACCAGCGTTCAATTGTGAAGATTGTGGCAAGGCATTCTCCACAGCCCGCAGCCTAAAGCGCCATATGGACCTTCACGTTCCTGGGTTCCCCTACACCTGTTTTGTGTGCTCCAGAGGTTACAAAACCAAAATGTCCTGGCAAAAACATCTGACAACTCATTTGAAAATCACTCAGGGAGACCCTGTACAAAACTCTTCAGAAGACAAGGAAACATCAGATGATGGCGTGGAATCTGTTCAAGTACTCGATTTATGCAGCAGTGATCACGATCAGAATGATGGAATCAGTGCCCAAAAGAAAGAAGTCTGTTCTAATGGTTCTTTACAAGGAGATTGGAACGACGTTATGCAATCGCTATGCCATCGATACACAATCCGTGTTCAACCTCCGCAACCTGGGCAACAAGTCGATTTCAACAATACTCCAGAAGGCACATCAATATCCGTTAGTTACACTCCATCAAAAACTTTGCCATCCAGCTCTAATACGACTCATCCTCCAAATGAGGCTCGATTTCTCGGAACAACAGGATCATGGAATGAGAAAAATCAGTTGTTCAATTCTCAACCCAATCAAGATTTTGATGGCTGTGTCTTTCTGCAAAATAGCGGAGATCTCCAAACGGTGAATCAGTCAATCCCTACCAGTGTGCCTTCTGTAGTGTCAGTCCCCCCTCCGCCACAGGCCAACACTCACCGCTGCTCATTATGTGACGTCAGCTTCGACAATCTCGTAGAGCTATCTATACACAAGACGACGCATCTACAAGATAAATGGGCAACGTGCGCCACTTGTGATAAAGTCTTTAGCTCCCTCACAGATTACCAGGTATGGACCCATCAGAACGACTTGGTGAATTTCAGCGGGTCAATCAACCCTGCACATCGCAATATATCTTGTAGGAAATCCGGAAGCTCAAAGGAGAGATTAGAACTGAAGAGAAAGAGGAACGCTTGGAGGCGACAGGCGATACGGCCGCTCACTGAAGAAGAACAACTGGCTATCACCAAAGAGAGCCCTAGTACAATATCAGAGAAAATCCTTCAGCAGTCCATATTACGCCTGAAAAAAGAACCAGTCAAACAGGAACCTGAAAAAGGCAAACATCCCAACCAGTGTAAATACTGCCCCAAGAGTTTCCGCAAACCTTCTGATCTCGTTCGACATTTGAGAGTTCACACTGGAGAGCGGCCGTACACTTGTACATCGTGCAACAAGTCGTTCTCAATCAAATCGACTGCCAAAAGTCACGTTAAAATCCACAAAAAGGAACAGGCTTACAGCTGCCACATTTGCAACAATTCTTTTGCTGCCATTGGAAGCCTTAAAGTGCACATGAGGCTCCATACAGGCGCTAGACCATTTGCCTGTGAGCTGTGCCCGGCCAAGTTCCGCACTTCAGGTCACCGAAAGTCTCACATGACCTCCCATATAAAGAAAGAATCGGCCAAAGAGAAATACCTTCCGTTACCTGCTGAACAAGCTCCATCGCCTCAGAGATCAGCATTGTCACCATCTAAGTCTCCAAGGTCCTCCGACGTTCCCGTCGAATACCATCCGCCAGCTGCCCTCGACTTCATCAAATCGTCAGAAAAAGAGATTAAGATGACAGTCGAATCGCTCAAAAAACCCCATTCAAGCCAATTCCTGTTCTCACTGGACAACGCGCTTACCTTCGGCGACAGACCGGGCGAACAATCGAGTCAGCAGTTCTTCTTGAAAGAGATCAAGGGAGATGAACAGGCTGGAACTGCCGCGCATTTCGTCGTGACGATGGGCGATGAAATCAATTACCAGGACAACATCAACGATCTTTTAGAGTCAGTTCCAAATCTCAACGTGGACCACGAAGACAGATTGAATTTGGAACTGGATCTCGAAGAACCCAAACAACAGCTGAACGAAACGTGTAGCGTGTGCGACAAGGTTTTTGGCTCCAGTATACTGTTGGATTCTCACATGAAGAAAGAGCATTTCGCCAGTTCCCTTCTTTCCTGTAATGTGTGTAAACAAACATTTAGGGGCAAGACAGATTTAGAGGTCCACATGTTAGTGCACGAACTGGACCAGCTGTCATGTCACGCTTGCTCACTGGAGTTCCCCGATGAAAGTTCACTCCGGAAACACAAATGTACAAATGAAGACTCTGACATGAAAACGATGCCCTCTACTTCGCTAGACCTCGCTTCTGTTGTTCACGAATTCTTCTCGTTCCCTACTTTATAG
Protein Sequence: MGTTEMSDIDLQDGSCTFAANVIGTQLLFSLPESAPQQSGDSAIVLENGVQYIPVYLQETLPTNVVSSYVIDDSQQLPLLNHNRQIILTEEQIVTFNHVTTSAIQQNEYAHFLSLTTDEAAENNDFDVLDNGRKAAIIVEKDDVLALNDAPAPVVDNDAVDPPDNTCPQACDTCGLRFESRKLFKKHILSHLHEKPYKCPHCPESFNHEYNYIPHVATHNKKDPFCPVCNKRFSRLAGLKAHILIHQCDDTLPCPECLEEFSSQKLLDAHRLEHKSGFVRQPPRYHHCASCDEKFVSRAILKEHIQEVHKLKMPKKIKKGRGCYACEFCKKRFAKPSQLVRHRRTHTGEKPFKCAECGKGFGQKGSLQIHMLKHSGERPYACKYCSSQFSQKGNLQAHMIRIHPEEKGEVRNRHCKFCSSSFKNIVGLQSHMSRHHGVVYSSKRGKSITFNEIPSRDDEIVVNIAIDKDTSNKENEGKRGEKGAESPGVESSNDEERPPPVEIDPSGKHSSSEVINKCKHCSKMFQKRADLVKHLKMHNEEKRQKTEHVCDCGKRFPCETNLMCHVQTSHADGYTCQIRNKICESVKDLERHSKWKHDVICQVDGSEQQDCEQLLNLGSPPPPVTPSESTSVPPESSSSVTVDPSSKILDNIPLECAKLLITTDGNIEVIHESGIEETSRENPKSEETQTPIAEIEASGREEEEQYLVQEVIEESTRENEDNSRKYKCDHCNLAFKQQSHWKTHLRIHTGDKPYSCEVCHKAFSAKSAMTVHMGTHDSVPAFNCEDCGKAFSTARSLKRHMDLHVPGFPYTCFVCSRGYKTKMSWQKHLTTHLKITQGDPVQNSSEDKETSDDGVESVQVLDLCSSDHDQNDGISAQKKEVCSNGSLQGDWNDVMQSLCHRYTIRVQPPQPGQQVDFNNTPEGTSISVSYTPSKTLPSSSNTTHPPNEARFLGTTGSWNEKNQLFNSQPNQDFDGCVFLQNSGDLQTVNQSIPTSVPSVVSVPPPPQANTHRCSLCDVSFDNLVELSIHKTTHLQDKWATCATCDKVFSSLTDYQVWTHQNDLVNFSGSINPAHRNISCRKSGSSKERLELKRKRNAWRRQAIRPLTEEEQLAITKESPSTISEKILQQSILRLKKEPVKQEPEKGKHPNQCKYCPKSFRKPSDLVRHLRVHTGERPYTCTSCNKSFSIKSTAKSHVKIHKKEQAYSCHICNNSFAAIGSLKVHMRLHTGARPFACELCPAKFRTSGHRKSHMTSHIKKESAKEKYLPLPAEQAPSPQRSALSPSKSPRSSDVPVEYHPPAALDFIKSSEKEIKMTVESLKKPHSSQFLFSLDNALTFGDRPGEQSSQQFFLKEIKGDEQAGTAAHFVVTMGDEINYQDNINDLLESVPNLNVDHEDRLNLELDLEEPKQQLNETCSVCDKVFGSSILLDSHMKKEHFASSLLSCNVCKQTFRGKTDLEVHMLVHELDQLSCHACSLEFPDESSLRKHKCTNEDSDMKTMPSTSLDLASVVHEFFSFPTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -