Basic Information

Insect: Stenodema calcarata
Gene Symbol: -
Assembly: GCA_963920205.1
Location: OY986063.1:11219114-11235374[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.3 1.2e+03 0.8 3.3 15 38 130 154 124 160 0.82

2 14 0.51 2.7e+02 2.9 3.5 18 38 161 182 149 183 0.79

3 14 0.076 41 5.6 2.2 17 35 186 201 177 209 0.75

4 14 0.38 2.1e+02 3.3 2.6 18 34 215 232 203 242 0.78

5 14 0.1 53 5.2 0.8 15 29 240 254 229 264 0.75

6 14 0.064 34 5.8 0.3 14 36 267 290 255 293 0.74

7 14 0.0063 3.4 9.0 1.8 6 38 288 320 283 321 0.81

8 14 0.13 69 4.8 1.0 6 32 316 342 315 349 0.77

9 14 0.058 31 5.9 1.1 12 32 349 370 338 376 0.75

10 14 0.19 1e+02 4.3 0.3 10 30 376 396 367 401 0.76

11 14 0.14 76 4.7 0.2 13 32 406 426 399 432 0.78

12 14 0.019 10 7.5 0.2 6 31 428 454 427 461 0.79

13 14 0.0026 1.4 10.3 0.4 13 30 462 480 455 488 0.79

14 14 0.012 6.3 8.1 0.9 6 34 484 512 483 517 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.3	1.2e+03	0.8	3.3	15	38	130	154	124	160	0.82
2	14	0.51	2.7e+02	2.9	3.5	18	38	161	182	149	183	0.79
3	14	0.076	41	5.6	2.2	17	35	186	201	177	209	0.75
4	14	0.38	2.1e+02	3.3	2.6	18	34	215	232	203	242	0.78
5	14	0.1	53	5.2	0.8	15	29	240	254	229	264	0.75
6	14	0.064	34	5.8	0.3	14	36	267	290	255	293	0.74
7	14	0.0063	3.4	9.0	1.8	6	38	288	320	283	321	0.81
8	14	0.13	69	4.8	1.0	6	32	316	342	315	349	0.77
9	14	0.058	31	5.9	1.1	12	32	349	370	338	376	0.75
10	14	0.19	1e+02	4.3	0.3	10	30	376	396	367	401	0.76
11	14	0.14	76	4.7	0.2	13	32	406	426	399	432	0.78
12	14	0.019	10	7.5	0.2	6	31	428	454	427	461	0.79
13	14	0.0026	1.4	10.3	0.4	13	30	462	480	455	488	0.79
14	14	0.012	6.3	8.1	0.9	6	34	484	512	483	517	0.79

Sequence Information

Coding Sequence: ATGGGTGACGTCAAAACCGAACTTACTACTGCGCATGCTTTAAAAGTCAGTATGACGCCAGAAGAGCTGAATTCTATATTCTGCCATGAAGTTTTCGGGTCTCTAAAAGGAGGTCATCAGTGCACTGTTTGTGGTCGGGTGTTTCCCTACCGGTACCAATTGATGGTCCATGCGCGATACCACACACTTCCCGAAGAAAATGGAGGAGGTATCGTTGAAGGAGACGTAGTAGCAGCCGCTGCCGCTGTTGCCAAGGAGTGGAACGGCCACGCTCTTGTAGAAGCGTTGCCACAGGCAGCCATTGCAGGGACGACTACAGCAGCTGTGGCAACGGCCGCGGCTCCCGCTCCAACGCCCACAGCTACTACTACTGCTAACGGTACGCAAAAGAATCATATTTGCACTCAGTGCGGACGAGGGTTTTCCCGCAAGGAGCATCTCGCCAATCACATGAACAGACACACAGGTCAAAACCCACACGAGTGCCATTTGTGCCCTAAGAAATTCTCGCGGAAGGATCATCTGGATTCTCATCTCAGGGCCCACGAAGCTGACTTCAAGTGTCACGTTTGTATGAAAGTCTTCAGTCGTAAAGAGCACCTGATTGCCCACGTTCAGTGGCACACCGGGTCGTCCCCACACCGGTGTCACCTCTGCCGCAAAACCTTCACGAGGCGGGAACATCTTGTTGCACACGTCCGTCAACATACTGGTGAATCTCCTCACGTTTGCCGGTTCTGTGCCAAATCATTCACGAGGCGTGAACACGTCATCAACCACGAGCGGGGACACACCGGAGAGACCCCGTTCAAATGTAACCTGTGCCCGAAGGCTTTCGCTCGGCGGGATCACTTGGTGAACCATACTCGTCAACATACAGGTGAGACCCCGTGGAGGTGCGTGGAGTGTGGGAAGGCCTTCACAAGGAAGGAACACCTCACCAATCACGTCCGGACTCACACAGGGGAAACGCCTTGGAGTTGCCTCGAGTGCGGGAAGGCGTTCAGGAGGAAGGAACATCTCACCATTCACACGCGGACTCACACAGgGGAAACACCATGGAGTTGCAACGAGTGCGGGAAGGCGTTCAGGAGAAAGGAACATCTCACCATTCATATTCGGATACACACAGGAGAGACGCCATGGAGCTGTACGGAGTGTGGCAAAGCATTTAGGAGGAAAGAAAACCTCACCATACACTCACGAATTCACACAGGAGAGACTCCGTGGAGTTGCGGCGAATGCGGGAAGGCTTTCAGGAGGAAGGAGCATCTCACTATTCACGCTCGAATTCACACAGGGGAGACGCCATGGAGATGCGGTGAATGCGGAAAGGCATTCAGGAGGAAGGAGCATCTAACCATACATGGCCGAATTCATACAGGGGAGACGCCATGGAGCTGCAACGTTTGCGGAAAGGCATTCAAGAGGAAAGAAACCCTCACCATACATGCTCGAATTCACACAGGAGAAACCCCTTGGCGGTGCGGAGAGTGCGGTAAAGCCTTTAGGCGGAAGGAGCACCTCACAAAGCATAGTAGAACCCATACAGGTACAGATAGAGCCACTGCCACGACCAAGACCATAGGTGTTCAAACCCAAACTTCCCCCACTCACGAACCCCTCATCCTCATACCGGCAGACCCTCAATCTGTCCTTATTTTCGGGTCGGCCCTATCAAGTGAACCCCGCCCCCACAAAAAGTCTTGGAAAAATCAGCAGCCGCAACAACAGCAGCCGCAACAACAGCAACAGCAACACCAGACTCAAACCCTGAGCGGTGTGACGATCGGATCCGGAATCCCCCCGGCGTTCCCCGGGACGCGGCCGCCGCTCCAAAGGCCTCTGACAGTCTCGACAGGAACGAACACGTCTCCGCCGGCTCCTCCGTTGCCGCCCCCGGCACCGCTTCACATCCCTCAGCATCACCAAAACCTCGATCTCTTTCCGGGCGTCGGACCTCCGCCTCACAACCATCCCCCGCCTCCGACCCATCACTTGTTCCCGCCTCCTCCGCACGATCAATACCGCTGGCTCAAGGGACACTTGATGTAA
Protein Sequence: MGDVKTELTTAHALKVSMTPEELNSIFCHEVFGSLKGGHQCTVCGRVFPYRYQLMVHARYHTLPEENGGGIVEGDVVAAAAAVAKEWNGHALVEALPQAAIAGTTTAAVATAAAPAPTPTATTTANGTQKNHICTQCGRGFSRKEHLANHMNRHTGQNPHECHLCPKKFSRKDHLDSHLRAHEADFKCHVCMKVFSRKEHLIAHVQWHTGSSPHRCHLCRKTFTRREHLVAHVRQHTGESPHVCRFCAKSFTRREHVINHERGHTGETPFKCNLCPKAFARRDHLVNHTRQHTGETPWRCVECGKAFTRKEHLTNHVRTHTGETPWSCLECGKAFRRKEHLTIHTRTHTGETPWSCNECGKAFRRKEHLTIHIRIHTGETPWSCTECGKAFRRKENLTIHSRIHTGETPWSCGECGKAFRRKEHLTIHARIHTGETPWRCGECGKAFRRKEHLTIHGRIHTGETPWSCNVCGKAFKRKETLTIHARIHTGETPWRCGECGKAFRRKEHLTKHSRTHTGTDRATATTKTIGVQTQTSPTHEPLILIPADPQSVLIFGSALSSEPRPHKKSWKNQQPQQQQPQQQQQQHQTQTLSGVTIGSGIPPAFPGTRPPLQRPLTVSTGTNTSPPAPPLPPPAPLHIPQHHQNLDLFPGVGPPPHNHPPPPTHHLFPPPPHDQYRWLKGHLM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01365766;
90% Identity: iTF_01365766;
80% Identity: iTF_01365766;