Basic Information

Gene Symbol
mysm1
Assembly
GCA_963920205.1
Location
OY986064.1:2462936-2481105[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.1e-10 1.7e-06 29.3 0.1 4 41 80 117 77 121 0.94
2 2 5.7 1.2e+04 -2.2 0.0 15 40 380 406 380 407 0.85

Sequence Information

Coding Sequence
ATGGAAGACGACGGTGAGATCGACGTTCTGGGCGACTTCAGCCTCGGGTCAATTTTGACGGACAGGATCGGGCTCTGCGATCCTAATGATCCTCGATCCTTCGAATACCCCTCCAGCTCCCCTCAGTGGTACTTGGACGGCCCCAGCGCCTCTTGGGATGATCAAAACGTCGAATCTGCTCTCCCTCCGAGTAACTGCTCTCTCATCAACACCGAAGAATTGTCGGATGCGAACGGCTGGACGGAGAAGGAAAAGGACCTCCTTGAACGTGGGATGGAACTTTTCGGGAAAGGTTGGACCCGTTTGGCTCAGTACATCGGAACCAAATCGGCGAGCGAAGTGAAGAATTACGTAAAGAAAAACGGCGCTCCTGGGCGAGGCGCCATCAAAACGCCGTCTATATCCGATTATCAACAGCTGTTCGATTCTATCGACGTGACAGAGATTCCCTCTTCCATAGAAGAAATCAAACTTCAGAAGATCGACGACGATCTGTACGTGGATGTGGTCAATGAAGAGAATTGTCCTCGCCCAAAACGTTTATTGATTCCCAAAGCACCCTCGACGAAACCAGTTAAAAAGTTGAGCATCTCTACCGGTTCTGGTGACGTGGATTGGCGTCCTAAATCTTTGGCAGCGATCAACTCCAAGTACACCGACAGCCTCCAGCAGCGGCTAGAGATGGTGTATTCCCTCCCCGCTCCGACCCATTCGAAAGTCATCGACCCTGAAATCGTATTGAAAGAGGAAGAAATCCTGTTTCCCGAGTTCTTGGGAGTCGGTCGCAACCACCAGGCTCAGCTCCAGCGGTATCTCAAGATCCGATCGCACATTGTGACTCAGTGGAACTCCCAAAAGCCGAAATACCTCACGAAATCCGTCTCACGCCAGGGATTGAAAAATTGCGGCGATGTCAACCTGATTGGGAGAGTCCACGCCTATTTGGAACAAAAGGGGATCATCAACTTTGGATGCGATCAGTGCCACTACATTCTGTATCCGTCGAAACAATCGACTCCAGCTCTCCCTGTTGACGAAATTGCAAACCAGGACCTGTGGTACAACCCAGTGCGAACGCGCAAGAGGCGGTGCGAAGAGGAACAACCGATTCTGGGGGACGGCAAAAACTATACTTTCGCTCACGAAGAGAACGGAGCAGTACACCTCGCTCACATTTCAAGCGAGCTGACATCGCAGCAAGAAAAAGAGATCAAATCCAAAAACAAAGCTACGACTCTGGTTCACTGCAAACAATTTACTAACGCGCCGTACGACGTCAAGCTCCACCTCCAGTGCCTCCTCGTGGCCGACGTGCACGGACACGCGTCTCTCGACCGGGAGATCATGGGTTTGCTCGGAGGGAGGTTTCACCCTGAGACGATGACGATGGAAATTTCCGCTTGCGTCCCCTGCTACGTCCTGTCCAGTACCAACACTCACTGCGATATGTGTCCAGTGTCGCAATGCAACGCCAAGGAGTCTCTAGCCAAAAGAGGTCTGGACGTGGTCGGTTGGTACCACACACATCCCGCGTCACTCCCTGAGCCCTCACCGCAGGATATCACATCTCAGGGAACCTACCAGTCACACTTCGCCCAGTCGTCTGTACCGTTCGTTGGACTCATTCTGTCCACATACACATCCTACCAACCCAAatttttcgtgcTGTCCAAAGACGAGCCGTACGAACTCAGATTTGAAGTCGTCTCCGCCGGCGGCGTGAACACTGAAGAAATGCGCTTGCAGATGTGCGATTCCCTTGGTAAAGTCACCGAAGTCACTCCTTTCGAAAAGGAAGTACCGAAAAAGTCCAAAACCTACTTGGAAACGTGTATGGCGCATTTCACGTCTGTCGTCTCACGCGTCGCCGACGTTTCTGCCGATGACGCGAGCGCCGTCCTCACGACCATCCGAGACGTCCTCACGTACTCCGAGGATGCGGCCGTCTTCGACATCGAGGTCCTCGAATGA
Protein Sequence
MEDDGEIDVLGDFSLGSILTDRIGLCDPNDPRSFEYPSSSPQWYLDGPSASWDDQNVESALPPSNCSLINTEELSDANGWTEKEKDLLERGMELFGKGWTRLAQYIGTKSASEVKNYVKKNGAPGRGAIKTPSISDYQQLFDSIDVTEIPSSIEEIKLQKIDDDLYVDVVNEENCPRPKRLLIPKAPSTKPVKKLSISTGSGDVDWRPKSLAAINSKYTDSLQQRLEMVYSLPAPTHSKVIDPEIVLKEEEILFPEFLGVGRNHQAQLQRYLKIRSHIVTQWNSQKPKYLTKSVSRQGLKNCGDVNLIGRVHAYLEQKGIINFGCDQCHYILYPSKQSTPALPVDEIANQDLWYNPVRTRKRRCEEEQPILGDGKNYTFAHEENGAVHLAHISSELTSQQEKEIKSKNKATTLVHCKQFTNAPYDVKLHLQCLLVADVHGHASLDREIMGLLGGRFHPETMTMEISACVPCYVLSSTNTHCDMCPVSQCNAKESLAKRGLDVVGWYHTHPASLPEPSPQDITSQGTYQSHFAQSSVPFVGLILSTYTSYQPKFFVLSKDEPYELRFEVVSAGGVNTEEMRLQMCDSLGKVTEVTPFEKEVPKKSKTYLETCMAHFTSVVSRVADVSADDASAVLTTIRDVLTYSEDAAVFDIEVLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00883984;
90% Identity
-
80% Identity
-