Scal007072.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Stenodema calcarata
Gene Symbol
Kdm5a
Assembly
GCA_963920205.1
Location
OY986049.1:8903527-8907888[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-21 2.3e-17 64.4 0.1 3 88 98 178 96 179 0.95
2 2 4.2 1.9e+04 -2.6 0.0 47 68 998 1019 995 1027 0.75

Sequence Information

Coding Sequence
ATGGACCATCATTCCAAGTCAAGTCCAAACAGCAAGTCCTCGCCGAGGAAAGGAgggaaaaaattcgttttcgaACCTCCTCCTGAAGCTCCAATCTTCAGACCGACCGCCGAAGAGTTTAAGGACCCCCTGGAATATATCAAGAAGATACGTCCGATCGGAGAAAAGACTGGAATTTGCAAAATCATTCCTCCAAATTGGAGGAATCCCTTCGCTCTCGATATGGACACATTGAAATTTGTGCCGAGAATTCAGCGTATAAATGAGCTTGAAGCAAGAACGAGGATAAAATTGAACTTCAACGACAAGCTTACCAAATTTTTTGCGCTTAGCGGCAAAACGTTTCAAGTTCCTGTCATGGAGAAGACATCTTTGGATTTGTACACACTTCACCGAAAAGTCAAGGAACATGGTGGTGTCGATGTTGTCaacaaagaaaagaaatggagcGATATTGCTGTGAGTATGGGTTTCACGTGCAAAACGGCATCGTACACGCTGAAAAATCACTACGACaatttgattcaccctttttTGCTCTCGCAATCTAAAATCAATGAAGAGGAAGACAAAGAGAATATGTCCAAAGATGATGGCGATGCGGGAGTAGACAGCGAGACGGGTGAAGGTATTAGTAAAGGTGCTCTGATGAAAACTGGAAAAGGTCCTTCGGCAATGAGGGAGTTGAAAAGTTTGAGATTTTTGGGACCTGGACCCAAAATGGCTGTTTGTGATGGGGGCGCACTTCAAAAAGGGTTGAGAACTAGAGGCAAGAAAATTATGTACGAGTTTGATCCTCTTGCCAAGTACATGTGCAAAGGTTGTAAGAAAGGTGATATTGAAGAAACATTCTTGGTGATGTGTGTGACGTGCGAAGATCGATACCATCATTTATGTTTGATTCCACCGTTGTCTCAGGATACACCGCCTTTGAATTGGAGATGCCCAAAATGTGTTGCCGCGGAAGGTTACAAACCACTAGAGGAGTTTGGTTTTGCCCAAGCAGAAAGAGAATACACACTGAACGAGTTCAAATCCATGGCCAACGAATTCAAacgaaattatttcaatatggACCCTGATCAAGTTGAACATGATGTTGTTGAGCAAGAATTTTGGAGAGTTGTTTCATCTATTGATGAGGCAGTCACTGTGGAATATGGCGCTGATCTGCACGTCATCGAGCACGGATCTGGCTTCCCTCGCCTTAACCAACCTTGCGTTCCTGGTGTGGAtccaaaaaaaattgcaaaatacGCCAACTCCCCTTGGAACCTAAACAACCTGCCGGTCCTTGAAGACTCAGTCCTTAGATACATAAGCGCAGATATATCAGGAATGAAAATACCATGGATGTATGCTGGCATGTGTTTTGCCACCTTTTGCTGGCACAATGAAGATCACTGGAGTTACtccataaattatttacacCTTGGTGAAGCAAAGACTTGGTATGGCGTACCCGGTAGCTATGCTGTACAATTTGAAGCTGCTATGCAAAAGGCAGCGCCAGAGCTATTTGAAAGTCAGCCGGATTTGCTTCACCAACTTGTCACAATTATGAATCCCAATGACATCATGGCTGCTGGTGTTCCAGTTTACAGGACTGATCAAAAAAGAGGCGAATTTGTTATAACGTTCCCTAGAGCCTACCATGCCGGGTTCAATCAAGGGTTCAATTTTGCTGAAGCTTGCAACTTTGCTCCTGCTGATTGGCTTGTAATTGGTCGTGAGTGTATCTCGCACTATTCACTGCTCGGGAGAATGTGCGTATTCTCTCACGACGAATTAGTTTGCAAAATGGCGATAATTTTCGACACCTTGGAGAGAGACATGGGTCTTGTTCTTGTCAAAGATCTGGCTCTTATGGTCGAAGCTGAAAGGTTAAGACGCACTCGCGCCTTGAAAATCGGAGTTGGAAACGCTATTCATGTCGACTTTGAAAAGCTACCGGATGATGAACGACAGTGTTGTGTTTGTAACACCACGGTGTTCCTCTCGGCTGTCGCTTGCTCTTGCGATAACACCCGCCTCGTTTGCTTGGACCATATAACTAAACTATGCAGCTGCGATCCCTCcaaatatattatgaaataccAGCTCAAACTTGACATTTTACAAAACCTGTTGGTAGTCATCAGCTCTAAATTGTGCGGATTCGACAATTGGACTACAAGGGTTGACGATGCATTGAACAAGAATGAGAAAAAAGTGTCTCTCAGGAAACTCACTGAACTGTTGGTTGAAGCCAAAGAGAAAGAATTCCCCCACAGTGAGCTCGTTGAACTTCTCGAGTATCATGTTAGAAGGTGCATTGAGTGTTCTGCATTGTCTAAAGCACTCGTTGCTAATTGCAGTCAGAAGGACAATCCGAGCAAAATTACTATTGATGACCTTGAACTCTTTTATCAAGAAATAGAAAAACTGCCTTGTTCAATATCTGAGGAATCTGCTGTAAAAGCTATTCTTGATAAGGCCAAAACGTTTCAAAGACTTGCTCAAAGAGTTTTAAGTATGAAAGAAGTGCACAAAACCCGAGTTCTATCATGTTGTAAGATGGGGCAGTCTCTCAATTTGGATCTACCTGAAATGCAAGAATTGGAAAAAAAGATAATGGAATTTGATTGGGTAGAAAAAGTGCAATTTGCAATCGAAGCAGAAGGGGATATTGATTTTGTTAAAAAACTAGCCGAGGACGGTCTATCTTTATGTGATTCTCCTCTCGTTCATAAAACCAGaaaagatattgaaaaatatatttctgaTAGGAGTACCGGTATAGCAATTGTCAACGTACAATCCATCGCTGATCTGGAAGGGGCTGTAATCAGAGGCCCTCCCGTATGTTTGAGAGATCCAACAAATGATATCGAACGATCTCTAATGAAAGTTCTACATGGGGACGTCGTTCTTTATCTACACGAACTCGAGAGATTGGTTGTTATGGCCAAACAAAGAACGCCAGAATCAAGTACTCTGAAACAGATCGTGCATCATGTGACTGTGGCTCGAAATTGGGCTATGGCCGCTGAAGCCCTGTTCTTGAAGAAGAACGATCCTCACTCTTTAATGGAGACCCTATGGCCCCGGAAGTTTGTCTCGCGCCATCTTTATTTCGCTAAACAAGTGGTCAAACAGTCTACTGGCCTTGAaacattgattgaaaaaaatgatgtaAGTCACTTTAGTAAGGCAAGTTTTAAAAGTGCCTTGATGCAAGAATTCCACACACTCTCCAAATTGAGGCTTGATAACCTCAGGTCAATGGATACCGATGATTTTGGTGGTGTTAAGTGTATTTGTGGCAACTCAATGGACGGCACTACCATTGTCTGTGAGCTCTGTCACACAGCAATGCATCTAACTTGTTTCAAGGAAACTGATACGACCAGATCTTCGAAAGTTAGTCCATCAGTTTGGGATGAAAACTTCCGTTTGCGGCGGCTGTGCGGCTACTGTAAAAGAACCAATCGGCCTCCCGTTGATTCAGTCAAAAAACTTGCTGGCACAATTGATGTTTTGAAGGTGAAAATTCCAGAATGTTTCGCTATAAAATACACCCTTGCTAGAGTTGACAAATGGAGAAAGGCCTTGCGAGAAATCATCAACATCGACGTTCTCACAACCCGATCCAAAGATGTTCTCACATTCTTCCAGAAATTTCATGGTAAGCGTTATTCTGGAGACCCGATGTCTGATGAACTTATGGCAGAGAGCCGTCTTATAATTAGCTCAGCCAAAGAAATTCCAAGAATGACTCTTCTAGCGTTGAAAGAAGAACTGATACACGGTAACAGATTTGAAATTACACCACCAGAGCTTAACGACATCTGGAATATCATCAATCCTATATGGATCCACGCGGAGATTGAGTCCAAACTGTACAATGGTCTTTGTTACCCTCTCCGAGGAGACTCATCTTGTGCTCATCCGAACCTAACAACTCTAGTTCAACAGCagacgtcaatgaagaagcccATGAAGAGAAAGATATCTTCCGCAACCCCACTGGGCAAACCTGAAACTCTAGGAGGAAAGATGatgttgaaaaagaagaagaaaattttaagCCAGAAGAAAAAAACGAGAAAGCAAACCTTTCCGGGACTTCTTACCTTCAAAAATCCTACTGAAGAACACGAACCCGAGGCCAACTGTGCCGCACCTACATGTGTCAAGCCTGGAGACGCTGCAGTTGACTGGGTGATGTGCGATGGAGCTTGCAAGCAGTGGTTCCACATGAAATGCGTTAATTTAGATAACAAAGAAGTAAATGATGAATTCGAATATATTTGCACAAACTGCGTATGTGACCGAGTGTGCGATCAAGTTACCGAAGGTCTTGGCTCAAATGAGTATTAa
Protein Sequence
MDHHSKSSPNSKSSPRKGGKKFVFEPPPEAPIFRPTAEEFKDPLEYIKKIRPIGEKTGICKIIPPNWRNPFALDMDTLKFVPRIQRINELEARTRIKLNFNDKLTKFFALSGKTFQVPVMEKTSLDLYTLHRKVKEHGGVDVVNKEKKWSDIAVSMGFTCKTASYTLKNHYDNLIHPFLLSQSKINEEEDKENMSKDDGDAGVDSETGEGISKGALMKTGKGPSAMRELKSLRFLGPGPKMAVCDGGALQKGLRTRGKKIMYEFDPLAKYMCKGCKKGDIEETFLVMCVTCEDRYHHLCLIPPLSQDTPPLNWRCPKCVAAEGYKPLEEFGFAQAEREYTLNEFKSMANEFKRNYFNMDPDQVEHDVVEQEFWRVVSSIDEAVTVEYGADLHVIEHGSGFPRLNQPCVPGVDPKKIAKYANSPWNLNNLPVLEDSVLRYISADISGMKIPWMYAGMCFATFCWHNEDHWSYSINYLHLGEAKTWYGVPGSYAVQFEAAMQKAAPELFESQPDLLHQLVTIMNPNDIMAAGVPVYRTDQKRGEFVITFPRAYHAGFNQGFNFAEACNFAPADWLVIGRECISHYSLLGRMCVFSHDELVCKMAIIFDTLERDMGLVLVKDLALMVEAERLRRTRALKIGVGNAIHVDFEKLPDDERQCCVCNTTVFLSAVACSCDNTRLVCLDHITKLCSCDPSKYIMKYQLKLDILQNLLVVISSKLCGFDNWTTRVDDALNKNEKKVSLRKLTELLVEAKEKEFPHSELVELLEYHVRRCIECSALSKALVANCSQKDNPSKITIDDLELFYQEIEKLPCSISEESAVKAILDKAKTFQRLAQRVLSMKEVHKTRVLSCCKMGQSLNLDLPEMQELEKKIMEFDWVEKVQFAIEAEGDIDFVKKLAEDGLSLCDSPLVHKTRKDIEKYISDRSTGIAIVNVQSIADLEGAVIRGPPVCLRDPTNDIERSLMKVLHGDVVLYLHELERLVVMAKQRTPESSTLKQIVHHVTVARNWAMAAEALFLKKNDPHSLMETLWPRKFVSRHLYFAKQVVKQSTGLETLIEKNDVSHFSKASFKSALMQEFHTLSKLRLDNLRSMDTDDFGGVKCICGNSMDGTTIVCELCHTAMHLTCFKETDTTRSSKVSPSVWDENFRLRRLCGYCKRTNRPPVDSVKKLAGTIDVLKVKIPECFAIKYTLARVDKWRKALREIINIDVLTTRSKDVLTFFQKFHGKRYSGDPMSDELMAESRLIISSAKEIPRMTLLALKEELIHGNRFEITPPELNDIWNIINPIWIHAEIESKLYNGLCYPLRGDSSCAHPNLTTLVQQQTSMKKPMKRKISSATPLGKPETLGGKMMLKKKKKILSQKKKTRKQTFPGLLTFKNPTEEHEPEANCAAPTCVKPGDAAVDWVMCDGACKQWFHMKCVNLDNKEVNDEFEYICTNCVCDRVCDQVTEGLGSNEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00883577;
90% Identity
-
80% Identity
-