Scal015453.1
Basic Information
- Insect
- Stenodema calcarata
- Gene Symbol
- Kdm5a
- Assembly
- GCA_963920205.1
- Location
- OY986052.1:12132304-12134458[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-24 2.2e-20 74.1 0.1 3 89 86 168 84 168 0.92 2 2 2.1e-15 9.1e-12 46.5 0.0 4 88 189 262 186 263 0.92
Sequence Information
- Coding Sequence
- ATGGAAATCGTGCCCGTGGAAGACTTTGAATTTCGGCAACCGCCGGAAGCGCCAGTTTTTGAACCGACGATAGAGGAATTCGACGATCCCATTTCGTACATAAGTAAAATCCGACCGGTCGCCGAAAAGTACGGAATTTGCCGGATAAAACCGCCGGAAGAATGGCGTCCGCCGTTTTCGTTGGATTTGAATAAATTCACGTTTAATCCGAGGGTGCAACCGTTGAAAGAGCTTGAGGCCACAACTAGAGTCAAACTTTTGTTTCTCCAAGGTCTCTCGGATTTTTGGGAGATGCAAGGTACACCCTTGAGACTGCCTGTTATGGAAAGGAAAGTTTTGGATTTACACAAATTGTACGAGTTAGTGAAAAAAGAAGGCGGTTGTGCGAAGACGACAGAACACAAAAAGTGGAGAAACATCTCACAAAGTATGGGGTTTCTTTCAGACAGAGGGAACGCAACTATTGTGAAAGTGCACTATGAGCGGTGGTTGAAACCGTATGAAATTGTCAAAAACGCAGTTTCCGAAGATGAGCTTATGAATGATACGAATTTTCAAACCATTTCATTCAGCAAAAAACTTTGCGGGTTCTGGAGGCGGAAAGGTGTGCTATGGAGTTGgccaattattgacaataagAGCGTAAATATGTTTGCGTTACACCAAGCGGTAAAGTCAATTGATGGAGCGGAAGTCTGTTGGAGCTCCATCGCTAGGAAGCTGCAGTTTTCAGAAAGCGCTGGCCCAGAACTCAAGCATTGCTACCAAAAATGTGTAGTCCCGTTCTTAGAAGACTTGGAAACGAAGGGCGAAAACGGTTTGGAAGATTCGGAAGTGTGTGAGGAATGCCAAATGGACGACGAAAGTGCTTCAATGGTTGTCTGTTCAACGTGTTCGGCGGTGAATCACTTGCACTGTTTGTCCCCTCCGTTTCAGAAACGCGTGAAGCCCAAGAGGGGCTGGAATTGTAATAGTTGCATCAAGAAGAAGCTCGATGCTCCCAGAGAACCGTACGGATTCGGGGAAGCCGAGAAACACTACAGTTTGGAAGAGTTTGGTGAGATGGCGGTGCAATTCAAGGAGGAACACTTCGGGATGCCCGCTCTCAGTGTCCCATTGGAAGAGGTCGAGACGGAGTACTGGAGGCTTTTAACAAATATTGAACATGACACGGTGGTGGAGTACGGAGCAGACATTCACAGTGATTACGGAATCGGGTTCCCGACCAGGGACGAAACGGGCTCGGAGAAAATGGAAACTGACGAGTACGCTCAATCGAAATGGAACCTCAACAACATTCCAGTCATTGAAACGTCTGTCTACAGCCACATCGGTACGAACATCCCCGGCGTCACGATACCCTGGATGTACATCGGAATGTGCTTTTCGACATTTTGCTGGCACATTGAAGACCACTGGAGCTACTCAATCAATTACCTTCATTTGGGGTGA
- Protein Sequence
- MEIVPVEDFEFRQPPEAPVFEPTIEEFDDPISYISKIRPVAEKYGICRIKPPEEWRPPFSLDLNKFTFNPRVQPLKELEATTRVKLLFLQGLSDFWEMQGTPLRLPVMERKVLDLHKLYELVKKEGGCAKTTEHKKWRNISQSMGFLSDRGNATIVKVHYERWLKPYEIVKNAVSEDELMNDTNFQTISFSKKLCGFWRRKGVLWSWPIIDNKSVNMFALHQAVKSIDGAEVCWSSIARKLQFSESAGPELKHCYQKCVVPFLEDLETKGENGLEDSEVCEECQMDDESASMVVCSTCSAVNHLHCLSPPFQKRVKPKRGWNCNSCIKKKLDAPREPYGFGEAEKHYSLEEFGEMAVQFKEEHFGMPALSVPLEEVETEYWRLLTNIEHDTVVEYGADIHSDYGIGFPTRDETGSEKMETDEYAQSKWNLNNIPVIETSVYSHIGTNIPGVTIPWMYIGMCFSTFCWHIEDHWSYSINYLHLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -