Scul021315.1
Basic Information
- Insect
- Stenichneumon culpator
- Gene Symbol
- ZFX
- Assembly
- GCA_964017025.1
- Location
- OZ024780.1:12233755-12238040[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.4e+02 3.7 0.1 3 23 16 36 15 36 0.94 2 15 3.8 3.7e+02 2.4 3.9 1 23 910 933 910 933 0.81 3 15 0.003 0.29 12.1 0.6 2 23 1016 1038 1015 1038 0.95 4 15 0.0037 0.35 11.9 0.1 2 23 1051 1072 1050 1072 0.97 5 15 1.5e-05 0.0015 19.3 2.1 2 23 1075 1096 1074 1096 0.97 6 15 0.014 1.4 10.0 0.3 1 23 1102 1124 1102 1124 0.95 7 15 2.8e-05 0.0027 18.5 4.5 2 23 1131 1152 1130 1153 0.95 8 15 0.13 12 7.0 3.7 5 23 1166 1184 1165 1184 0.97 9 15 2.5e-05 0.0024 18.6 1.5 3 23 1191 1212 1190 1212 0.97 10 15 0.014 1.4 10.0 0.5 2 23 1228 1248 1227 1248 0.97 11 15 7.7e-05 0.0074 17.1 0.7 1 20 1254 1273 1254 1276 0.92 12 15 9.5e-05 0.0092 16.8 2.7 1 23 1284 1306 1284 1306 0.99 13 15 0.0027 0.26 12.3 3.2 1 23 1312 1334 1312 1334 0.97 14 15 4.8e-06 0.00047 20.9 3.9 1 23 1340 1362 1340 1362 0.99 15 15 0.00035 0.033 15.1 7.2 1 23 1368 1390 1368 1391 0.96
Sequence Information
- Coding Sequence
- ATGGATCTCGGCAGCATTTCGGGAGCTGGCACCGGTGCGGTCGCCTGTCCCGTCTGCACTCTATATTTACGGGAGGGCATAAGCCTGCAGAGGCACTTGGATACCCATCCAAAGGAACAGGTTATAGAGGCACTAATAAAGGCTAGCTCCAACCCTACTGAAACTCCGACGCCGCCGATCCCGTCGACGGTGCCGCCCGCATCTAACGCACAGTCGCATCATCAAGTTAATCCTGGCGCTCAGATACCCGCTCAATCGCCCTATCCGATGGGTCCAGTTTTCGAGTGTCCTCCGATAAATACAATGATGCCTCCGCAGTTCGCCTCGTTCAGTTATCAGCAATTTGTCAACAATGGTACGATGATGATCCCGCAGTACGCCATGGCGCCCCAGGCCAATCAGATGATGCAAATGCTGTACAATCCGTACAGCATGTACCAGCAGCAACAGATACCCACCGTCCAGATGATATCGCCGATTACTACCATTCCCGCGACAAGAATCAGGCCCGTCGTCACGGTGGCGAACGAAGTCAATACCAGAAGCGTCATTATTCCCAACGGCGCTACAGAGTCCAAACAAATAACATCCGAATTATTGTCTGAGCCTGAGACGGAAAGGATTCTGCCGGACATAGAACTTCCGGCGACTCCCGCGCCGCTGGAGGACGATGCGCTGTCTTCCCGTCACGGAAGCGACGAGGCGGCCAGACTACAGGTGGAGCACAGAGGCCAGCAGACCCAAAATTCCATGACCCAGAGAATGGCCGGTGACCAGCAGGAATATCAGGGCTCTCAGGACTCGATCGGGGAGACCTGCGAAAACAGCACCAACGAGGAGGACAAAGCCGAGAGTATAATTCCCATCGAGGAGGAGAGACAAATTGAGATAAATAGCACGGATGTACAATGTAAAGTTATAGAATTTGAGGAGTCCGAGAGCCGGCAGTTCGCGCAGGTATACGACAGCGAGATGGAAAAAAGTAGCGTAAACGAGCGGGAAATCGACGGTGAAATCGACGAGCgcaaacttgagatcgaactacCAATCGGCGAGAGCAAGGAGTGTTCGAACGAATCGGCCGAATCACGAAAAACGGTCGACGAGGAGATGAAGGAAACGGGCCAACCGGAGGTCGAGCAATTGGAACGGCTGCTCATAACGATAATGGAATCGGGATTCGAGACCGTTCAGGCTAAGAACAACGGGGCCGAGCCGAAACAGGCGGAGAGCGAGCGGGAGAGAAGGCCGACCGCCGACGAGGATACCGAAAGCGTGGAATCGATACGGGAAAAGCGGGAGAAGGAAATCGGCAAAGCATACGCGGCCAAGTTGCAGGAAACTGCACTCTGCAAAAGTATGAACGACAGTATCGAGGCTATAGAGGAACTTGAGAGCAATTTCAATCATGCATATCGATATAGATGTAGTTTATCGGCGCCCTCGTCGCCGGTTGTTTCTAAGAAACTTCGGAGATCGTACTCGGTAAGATCGGACTACGGCTCGAACGAGAATCTCAACTTTTATCCGGCCGGCTTCGACGCGACGGCAATGCACGACGCCGACGATGAGGAGGCCAAGAACATGGACGACAacttcgacgaggaggacatGGAAATCGAGGAGATAGCCAGCCCGCACACGCCCTTTGTAAAACAGAACGACACGCTCGATCGCAACAGATCGCACACCCCGCTGTCGGCGATCAGCGGAATATCGGTGCTGCGGGCACGAACCGATGGCGGCAAGCCGGACACGCCGACTTCCGTTAACTTGTTCTGTCCGATGGAGACCGGCAGTACGAGCTCCGAGGGCGGCGGCGAGggtgaggaggaggaggacgacgaggaagacgacGACCTtgacgaggaagaggaggaagaggaggaggaggagggagagggagaggaagagagcaACGATTCCGCGGATTCATCGATGGAGAAACATCCGATAGACTGTTCCCAAGTCGAACAGGACGCAAAGTCGAGCGTTCAGGAGGCAAACATCGCCGAGAGCCTGGAGAGAAAATCCGAATCCAATCAGATATATCACCAGTCGGTTATAACTGAGCACGTTAGCTCGTTTCCCGCAATAAACTCGCAACAGCCGTTGATAATACACGAGAGTTACTCGATGTCGAGCAACAAATCAACGACGCATAACAATCTGTTGAATATCTCGGAGCTGGTTGATCCAACGACGAGCGCGGAATCAAAGAGCTTTCAAGCGGCCAAGTCGATTCATCACATGCCGTCGACGGAGCTGCTAAACATAAACGAGGACGCCCACGCCGGCCCGATGAACGTATTCGAGTTTGATGGACTTCAAATTTTAGTTCCTAGTACATTCATAAGTGAATCTTCCCAAAAAGCCATCAGCGCGACGAGTCAACAGTCGATGGCGAGCAGCGAAGGCGGGGCCGGCATCGACGAGGAGGTCAAGAGCGTCAACATGCGAGCCGACGAGACCATGCCGCCGCGGGGCGAATTGTCGGAACAGGAGAGCAACGGATGCACCGAACATTCGGCCTGGCAGCTTTACATGGGTCAAGAGTCATCTCGTATGTCGACCTCTTACGACCTCATGGCGCGAGAGAGCTGGGAAGAGTCGGAGGGCTCCGACAACGAAGTTGGAGTACCGCTGTTGGACAGCAGATCCCTCGCAACGCACTTTACCTCGAGCCTGTTTCTAGATCGGGACAGGAAAACACCGACGAAGCGCACCTTCAAGTGTTCTCATTGCACGGAGGTGTTCGATTGTCCGAAGGAGCGCAGGGTCCACAGCACCACCGTTCACAAAGAGGCCGGCCCGAGCAGCAGCAACGATCCGACGGATCAGTCGGAGGTGAAAGACATCAAACTGTTGGACGGCCGTATGAATGTCTTCGACGATATATTCGTTTCGGGAGTGCACGGCCAACAGACGTACCATCACCAACAGCCGTTGTTGCATCAGTTGCAGCCACCTCAGCAACCGGACGACGCCAAAGCCGACGGCGATCAGAAGATCGACAATCTGGCGATTCCTCAGAACTTGGAGATCTCGTGCGCAATGTGTAGCCAGCGATTCAGCAGCGAACGATCGCTCCAGGTCCACAACAGACGGGTACACGGCACGGAGGTCGCCCGACGACTCCAAGAAATATCCAAGTGTCAAATATGCAACGAAGAGTTTCCCTCGGTGATGCTTTTCAATGCCCATCTTAAGATCCATCCGCTCGAGTGTTCGCAATGCGGCAAATACTTCTATCGGAAGCCGAACTTCAAGCTTCACATGAAACGGCATCTTGGAATAAAACCATTCCCGTGCACCGTATGCGACAAAGCATTCCTCACGAAGCAGAAGCTCGACGAGCACACGAACGGTCACACCGGAAATGCACCGGTAAAGTGTAATTTATGCAACGAGACTTTCCGTAGATATTCAAATTTAACCCAGCACAAGAATAGACATCATCTTAATATTAAGAGGAAACTTAAGGACTACATATGCCACTGCGGGGAGGTCTTCCacacgaagaaaaaactcGCCTGGCACAAGGAGACACACGACGAGAAACCGAAGGCGTGCACATATTGCAACGAGAGGTTCATACACATGGCGAGTCTTACGCGACACATGAGACGGGCTCACAATCGAAGATTCGTACCGGACGCTcagagggagagcgagaacgTCGAGTGTCCGATATGTAAATGCATTTACTTGCGATCGTCGCTGTCGGTACACATGCGCGTACACAACGGCGAGAGACCGTACGAATGTCAGGTATGCTCCAAGGCCTTTAGTACCAAATGGAATTTGCAATTGCACAAATGGACCCACGCGGCGCGCAGCACAAAACCCTTCAAGTGCAATCAGTGTAGCGCCGCGTTTTATCGACATAGCGATTACACCGCTCACATGAATTCGCATCGCAACGTTCGCCCCTACACGTGTAACTACTGCGGCGCCCAATTCATAAGGAAGTACAACTGTCTGAGACACGTTAAGGAACACGAGGAGAACAAGGCGTACACATGCGATGTGTGCAACAAAACTTTTCATCGCTCATACTATCTCAAGGAACATTTGCGAGTGCATTCGGGCGCGAGACCTTACACGTGTCACATTTGTGGTAAATCGAGTAGCACCAAGTCAAATCATAACAAACACGTTAGAATTCATCACGCGCGAGAGCCTGTAAATACGGAGAATTAA
- Protein Sequence
- MDLGSISGAGTGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSNPTETPTPPIPSTVPPASNAQSHHQVNPGAQIPAQSPYPMGPVFECPPINTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYSMYQQQQIPTVQMISPITTIPATRIRPVVTVANEVNTRSVIIPNGATESKQITSELLSEPETERILPDIELPATPAPLEDDALSSRHGSDEAARLQVEHRGQQTQNSMTQRMAGDQQEYQGSQDSIGETCENSTNEEDKAESIIPIEEERQIEINSTDVQCKVIEFEESESRQFAQVYDSEMEKSSVNEREIDGEIDERKLEIELPIGESKECSNESAESRKTVDEEMKETGQPEVEQLERLLITIMESGFETVQAKNNGAEPKQAESERERRPTADEDTESVESIREKREKEIGKAYAAKLQETALCKSMNDSIEAIEELESNFNHAYRYRCSLSAPSSPVVSKKLRRSYSVRSDYGSNENLNFYPAGFDATAMHDADDEEAKNMDDNFDEEDMEIEEIASPHTPFVKQNDTLDRNRSHTPLSAISGISVLRARTDGGKPDTPTSVNLFCPMETGSTSSEGGGEGEEEEDDEEDDDLDEEEEEEEEEEGEGEEESNDSADSSMEKHPIDCSQVEQDAKSSVQEANIAESLERKSESNQIYHQSVITEHVSSFPAINSQQPLIIHESYSMSSNKSTTHNNLLNISELVDPTTSAESKSFQAAKSIHHMPSTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEVGVPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCTEVFDCPKERRVHSTTVHKEAGPSSSNDPTDQSEVKDIKLLDGRMNVFDDIFVSGVHGQQTYHHQQPLLHQLQPPQQPDDAKADGDQKIDNLAIPQNLEISCAMCSQRFSSERSLQVHNRRVHGTEVARRLQEISKCQICNEEFPSVMLFNAHLKIHPLECSQCGKYFYRKPNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00905605;
- 90% Identity
- iTF_00905605;
- 80% Identity
- -