Basic Information

Insect: Stenichneumon culpator
Gene Symbol: -
Assembly: GCA_964017025.1
Location: OZ024776.1:125929-128684[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.9 3.8e+02 2.3 1.9 5 23 130 148 129 148 0.93

2 12 0.00017 0.016 16.1 1.0 1 23 153 176 153 176 0.97

3 12 0.49 47 5.2 0.4 5 23 183 202 182 202 0.91

4 12 4.2e-07 4e-05 24.3 0.4 1 23 282 304 282 304 0.95

5 12 1.8e-05 0.0018 19.1 1.4 1 20 310 329 310 332 0.95

6 12 0.0012 0.12 13.3 0.6 1 23 337 360 337 360 0.97

7 12 7.1e-06 0.00069 20.4 1.0 1 23 366 388 366 388 0.97

8 12 0.00017 0.016 16.0 0.5 1 23 394 417 394 417 0.97

9 12 3.3e-05 0.0032 18.3 0.9 1 23 428 450 428 450 0.95

10 12 7.4e-05 0.0072 17.2 1.4 1 23 454 476 454 476 0.95

11 12 1.7e-05 0.0017 19.2 0.9 1 23 482 504 482 504 0.98

12 12 1.5e-06 0.00015 22.5 1.4 1 23 510 532 510 532 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.9	3.8e+02	2.3	1.9	5	23	130	148	129	148	0.93
2	12	0.00017	0.016	16.1	1.0	1	23	153	176	153	176	0.97
3	12	0.49	47	5.2	0.4	5	23	183	202	182	202	0.91
4	12	4.2e-07	4e-05	24.3	0.4	1	23	282	304	282	304	0.95
5	12	1.8e-05	0.0018	19.1	1.4	1	20	310	329	310	332	0.95
6	12	0.0012	0.12	13.3	0.6	1	23	337	360	337	360	0.97
7	12	7.1e-06	0.00069	20.4	1.0	1	23	366	388	366	388	0.97
8	12	0.00017	0.016	16.0	0.5	1	23	394	417	394	417	0.97
9	12	3.3e-05	0.0032	18.3	0.9	1	23	428	450	428	450	0.95
10	12	7.4e-05	0.0072	17.2	1.4	1	23	454	476	454	476	0.95
11	12	1.7e-05	0.0017	19.2	0.9	1	23	482	504	482	504	0.98
12	12	1.5e-06	0.00015	22.5	1.4	1	23	510	532	510	532	0.98

Sequence Information

Coding Sequence: ATGCTGAGGGCACTGCCCTTCGAAGCGAAGTACACGGAGATGCGGATAAAAGTTAGAAATAAATCTCGGTCCGTTATACTGGAAAAACCGATACAGAGGCCGAAACGCACGAAGGAGGACGTGGATTATCTTACGGTGAAGGTAATGGAGGATTTCTATAGAATTCCGAAGTCCCTGTGCCACTTCTTGGGAAAAACTCCGCCGATCGAGGCATTCATTTCGGATTTCTCGCTGAGTAAAACCGTGACCGACGAAAAGATGAGTAGCACCGAAGAAACAATGGAACACTCTCCGAGCGTAAAAAACTACGAAGATCCCGACGATCTTCCGCTGGACTTGCAGCAGAGATACATTAGAAATTGTAtggaggataaaaaaatcaataatcaGTGCAGGAAGACGTTCGGGAAAAAGAGTGGACACGGGCGTCACATGCAGCTTCACAGCGGCGAAGAGTACTCGTGCGACAAATGCAGCTACGTAACGAAGAGCAAGATGTCGATGAGGGCTCACATGCGACTGGTTCACGAGATGGACGTCTGGAATCAGTGCGAAAAGCGTTTCATATCAAATTTCGAAGTGAACGATCACAAAACTAGTAATCACGAAGCGACTTTGGATCCACCGttgaggaagagaaaaagaaaaaacagtcCCAAACGGAAAAACGTCAGAAAGAAGAAACCTTCGGCTTGGACCGAAAAATCGAAGAACAGTATATCGCCGTCGAAGTGTCCCGGGAACGATGCGAACAACGAGGATCTGGACGACGTCTCCTTGGACCAGCGAGGAGAGAGTACgacgaagcgaaaaaaattattaaaagccCAAGCACCCGTGAGCTTCGCCTGTGAAACTTGCGGTCGAAGTTTTCCACGAAAGAGCGCCTTGAAGACTCACATGGTGAACCATTGTACCGTTAAATCTCACAAGTGCGACATTTGCGAAAAGCTCTTCAAACGAAAATCAGCGTTGACGACCCACATGCCCCTTCACAGCGGCGCCAAGTTCAGCTGCGACGAGTGCGACTACACGACGACGAGCAAAATTGCCGTCAGATATCACGTACGGCGAATGCACCGAAAGGACTTCAGATACAAGTGCGACGAGTGCGGCAAGAGTTTCATGTCGAACAGCGAGGTCAAGGACCACAAGACCAGTCATCTCGGCACCAAGAGTTTCATTTGCGAGTTCTGCGGCAAGGGATACCTGCAGAAGTCTTCGCTGACCGCTCACAAGCGTTCGGTGCACGGTGTTGTACTCAAGGTATTCAAGAGGGATCATGAGTGCAAGATATGCAACAAATTTTTCGCCTCCGAGTATCTTCTGCAAAATCACGTTGGTATACATTCACGAAAATTTTTGTGCACTCACTGCGGCAAAGAATTCGCGACCAATCAGGGCCTGCTGTTGCACAATCGTATGCACACCGGTGAGCGTCCGTTTCAGTGCCGTAACTGCTCGAAATCGTTCGTGAGATCGAATGCCCTCGCCGTCCACAAACTGACTCACACCGGCGAGAGACCGTACGTCTGCGATCTATGCGGCAAGAGTTTTACTCAGCGTACGACGATGATGGCTCACAGAAAAAAGCATCCCGGAAGTCATCCTCCACCGCCGCCGACACAGTTGAGCAAACTCGAGAGCACCGTCGAACCAAAATCCTGA
Protein Sequence: MLRALPFEAKYTEMRIKVRNKSRSVILEKPIQRPKRTKEDVDYLTVKVMEDFYRIPKSLCHFLGKTPPIEAFISDFSLSKTVTDEKMSSTEETMEHSPSVKNYEDPDDLPLDLQQRYIRNCMEDKKINNQCRKTFGKKSGHGRHMQLHSGEEYSCDKCSYVTKSKMSMRAHMRLVHEMDVWNQCEKRFISNFEVNDHKTSNHEATLDPPLRKRKRKNSPKRKNVRKKKPSAWTEKSKNSISPSKCPGNDANNEDLDDVSLDQRGESTTKRKKLLKAQAPVSFACETCGRSFPRKSALKTHMVNHCTVKSHKCDICEKLFKRKSALTTHMPLHSGAKFSCDECDYTTTSKIAVRYHVRRMHRKDFRYKCDECGKSFMSNSEVKDHKTSHLGTKSFICEFCGKGYLQKSSLTAHKRSVHGVVLKVFKRDHECKICNKFFASEYLLQNHVGIHSRKFLCTHCGKEFATNQGLLLHNRMHTGERPFQCRNCSKSFVRSNALAVHKLTHTGERPYVCDLCGKSFTQRTTMMAHRKKHPGSHPPPPPTQLSKLESTVEPKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -