Basic Information

Insect: Stenichneumon culpator
Gene Symbol: PRDM10
Assembly: GCA_964017025.1
Location: OZ024774.1:15903983-15908669[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0093 0.9 10.6 0.6 2 23 486 507 485 507 0.95

2 14 4.9e-08 4.7e-06 27.2 1.3 1 23 541 563 541 563 0.98

3 14 0.0025 0.24 12.4 1.4 1 23 571 594 571 594 0.98

4 14 0.0084 0.81 10.7 0.1 2 23 612 633 611 633 0.96

5 14 2.1e-05 0.0021 18.9 0.4 2 23 646 667 646 667 0.97

6 14 0.00015 0.014 16.2 2.3 1 23 684 706 684 706 0.98

7 14 0.012 1.2 10.2 2.0 2 23 715 736 714 736 0.96

8 14 0.0077 0.75 10.8 0.1 1 23 743 765 743 765 0.98

9 14 0.00016 0.016 16.1 3.1 1 23 772 794 772 795 0.96

10 14 0.00098 0.095 13.7 1.8 1 23 800 822 800 822 0.98

11 14 8.3e-06 0.0008 20.2 2.8 1 23 828 851 828 851 0.97

12 14 0.002 0.19 12.7 1.7 1 23 884 907 884 907 0.97

13 14 0.00052 0.051 14.5 1.9 1 23 929 952 929 952 0.95

14 14 0.0045 0.43 11.6 3.4 3 23 990 1011 990 1011 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0093	0.9	10.6	0.6	2	23	486	507	485	507	0.95
2	14	4.9e-08	4.7e-06	27.2	1.3	1	23	541	563	541	563	0.98
3	14	0.0025	0.24	12.4	1.4	1	23	571	594	571	594	0.98
4	14	0.0084	0.81	10.7	0.1	2	23	612	633	611	633	0.96
5	14	2.1e-05	0.0021	18.9	0.4	2	23	646	667	646	667	0.97
6	14	0.00015	0.014	16.2	2.3	1	23	684	706	684	706	0.98
7	14	0.012	1.2	10.2	2.0	2	23	715	736	714	736	0.96
8	14	0.0077	0.75	10.8	0.1	1	23	743	765	743	765	0.98
9	14	0.00016	0.016	16.1	3.1	1	23	772	794	772	795	0.96
10	14	0.00098	0.095	13.7	1.8	1	23	800	822	800	822	0.98
11	14	8.3e-06	0.0008	20.2	2.8	1	23	828	851	828	851	0.97
12	14	0.002	0.19	12.7	1.7	1	23	884	907	884	907	0.97
13	14	0.00052	0.051	14.5	1.9	1	23	929	952	929	952	0.95
14	14	0.0045	0.43	11.6	3.4	3	23	990	1011	990	1011	0.98

Sequence Information

Coding Sequence: ATGGATCTGAGGGGCCCTCCCGAGGGGGCCCCTGGCGATTCACTCGAGATGCCGATAATCGACAAAACATCGGAAATTTCCGACAATTGGCCCGCCAATCAATTGGTCGCCTCCGTCATTGGCGATCAGTCGAGAAAATCAAACAACAGACTATTGTTCTTGACTGTGGAGTACGTAGATGATCAGTCGCGCGACTACTCCAGAATGTTTCCGGCTTACGAACAAGTTTCATTCTCGTCCCGGGCACCCTCGCCTCTCTCGGAATTTGAACATCGAGTCAGTCCACTGGATCCAAACATGAGCTCCGCCGCAAGATACTCTCCGACGCCTGTCCCCCTTCCTCCTCTGCCGTTTCACAATTCTGTCGTAGTTCTTCAGAGCCCACCATCCCCTCTGATCGTTCCACCCGAAACGGATACTCGCACAAATATCAACTTTGTCGCCAGCCAGAGCGTTGACCAGGGGGTTCAGCAGACCGAGAGTGTGGCCGACTTTGTCAACAACGGCAACGAGGAGGGACTGGTTTCCACAGTCGGCGGTGAATTGATTCTCATGCAAGGTGCAACTTCGGAATTGGAAGCTTCAGCAGCGCCGCTGATGCTCGCGGGAATACCGGGTGCCGAGTTCGCTTTGACGAGGGACTTTCTCGTTATGCCCGACGATCAGATGAACGTGATGAGTACGCTGAGAAATCAGGAGATGAGCGACGAGCAGGCGGTCGTCGTTGCCGAAGCTATCGGTGCAGTCGAGGAGAACAATCTTTCGGGACCCGTTTCGGTACCTGAAAATATCGTCAACGAGGAGAAAATTTTTGAATCGAAAGAGTCCGAAAAGAGCGACACGGAAAGAAAAGGCGTGAGACGATCGAGACGGCAGATAAACGACAAAAAGACGTTTTGGTGCGAGGATTGCGATTCCGGTGGTCACAAAGCCGGCGAGTGCACTTCGAACGACGTACGAACGATCGCCGATCAGCCGGTGCCGTCGCGCGCTATAGCAACACTTCCGGGCTCGTATCTTTCCATCAACAAATTGCCGGCATCGAACGTCGCACCGGGTGGCTCAAGTTTCGGAGTTTTCGCAAAGCGCAACATCCGATCACGCACGCAATTCGGTCCGATTGAAGGAATTCTTTGCCCCTACTACGGCACGCCATTCGACAACGCTTTgccgttgctctatgaaactgAGAACGGAGAATTTTTGAAGATCGACGTATCTAACGAAAACGCTTCAAACTGGATGCGCTTCGTGAGGCCTGCTACTACGTACAAGGAGCAAAACCTTGGAATTTGTCAACAGGGTGACGGAATTGTTTTTCTCACTACTAGAAACATTCTGCCGAGGGAGGAATTGAAAGCCGGGCCTAATGCGGATTACGCTATACGCAGAAACTTGACGATTCTTGAACCCGAGATGAAAGACGACAAAGaTCCGAACAACTCCAATGCCTGGCCGTGTTTTGAGTGCAATCAGCGTTTTCTTACTTCGGAAAAGTTGCAAAAACACTTGACCATACACGACAGCCCGAAGAGTGAGACGAAAGCGAGGATGAAGCGAAGAAAGATCGCCGTTCCGACAAACAAGCTGTTCAAAGTAGTGGACGGTCAAACCCTGCTGTACACGTGTCCGCACTGTCCCAAAGTATTTCCACGAAGTTATAGTCTTAAGCGACACTTGTTGATACATCCAGGGGCCAAAGCTCCGCGATACGAGTGTCCATCGTGCGGAGAAAACTTTTTACATCCTTACAATCGCAGCCGACATATGAAGATATTTCACGCCGGTGGTACCAAGGAGAAGGAGAATTCACGACAAAATTCACCCGAATGGAAGTGCTCGACGtgcaatataatttttggCAAATCGTCATTGCTGAGCATACACGCGCTCGTTCACACGAGCAACGGCATCGCCAACGATAATTTCGACAATCGTTGTCCGCAGTGTGACGAACAATTCAAGACTCGCAGCGAATTGATAAATCACGTTGCGAAACACGGCCGCTTACAACTACCAAAATCAACGAAAATTACACCACTGGCGTCTTACAAGTGCACGATGTGCTACAAACGTTTTGCGACCAAAGTACGTTTACAGCAGCATTACTTGGTACATGGTGCCGAGGACCAAAAGCCACTGCCATGCAATATATGTTTAAAACGATTTATGAACAACTCAGCGCTGTCGTGCCATCTTAAGACCCACAGAGAAGACAAGCACATATTCGAATGTCCGATGTGTCGTGAGCTCTTCAATCAAGTTTTAATGTTAAAAGACCATATCGAGACACATCGAAACGACGATGAGACTTTTACTTGTCCTCACTGTCCGAGAACCTTTGCAAAGTATTCTGTCATTCGCAAGCACATAAGAGCCCATCACTGTGAACGAAAGCACAAGTGTCAAGTTTGCGCCAAGCGATTTCCCACAGTTGACAAATTGCGAATGCACTTGCTTCGTCATTCCGATTACAGGGAATTCCGTTGCGCCAATTGCGATAAGCAATTCAAACGAAAGGACAAGCTCAAGGAACACATGACAAGGATGCACGACGCTCAGAGAGCGAAGTGTGATCAAACATCACAGAGCAATCAGATAAAGAAGTTCGTGCCGAAGGTGAATCCGACGGATTACAATCGATTCGTCTACAAGTGTCATCAATGCCTGGTCGGtttcaagagacgcggtatgCTCGTTAATCACTTGGCTAAGCGTCATCCCGATGTTTCGCCCGAATCGGTGCCCGAATTGAATTTACCGATTTTACGACAGACGCGAGATTACTACTGCCAATACTGCGAGAAAgTCTACAAAAGCAGCAGCAAGAGAAAAGCTCATATCGTGAAGAATCATCCGGGTGCGGCGCTGCCACCGAGTAATCGTCACAAGGAGGCCGATGTGGCGGGTTTGCCGAATCCGACTTTCAGCCAGACGGTCGGAAGCATCACCACGACACCGCAGGGCTGTCAGTGGTGTCACAAACAATACGCGAGCAAGGCGAAGCTTCTGCAGCATCAGCGTAAGAAGCACCCGAATCTAATGGAGCCGGCCGATCAAGTGCCACGTCCGCGCAATCGACCGCCACGCAAACGCAATCATCAGCCGACCATAGACGACGGCAATTTCATGATGAACGATTACATACAGGGCTGCGACATAGAGACCGATTTCATGAAGCCGAGGATAATTAAAATATCCGACGACGTCAATCTCATCGGCAACGGTCTCGAGCTCGTCGGTCAACAGTTCGTTCGCATGCGCGACATACGCTGA
Protein Sequence: MDLRGPPEGAPGDSLEMPIIDKTSEISDNWPANQLVASVIGDQSRKSNNRLLFLTVEYVDDQSRDYSRMFPAYEQVSFSSRAPSPLSEFEHRVSPLDPNMSSAARYSPTPVPLPPLPFHNSVVVLQSPPSPLIVPPETDTRTNINFVASQSVDQGVQQTESVADFVNNGNEEGLVSTVGGELILMQGATSELEASAAPLMLAGIPGAEFALTRDFLVMPDDQMNVMSTLRNQEMSDEQAVVVAEAIGAVEENNLSGPVSVPENIVNEEKIFESKESEKSDTERKGVRRSRRQINDKKTFWCEDCDSGGHKAGECTSNDVRTIADQPVPSRAIATLPGSYLSINKLPASNVAPGGSSFGVFAKRNIRSRTQFGPIEGILCPYYGTPFDNALPLLYETENGEFLKIDVSNENASNWMRFVRPATTYKEQNLGICQQGDGIVFLTTRNILPREELKAGPNADYAIRRNLTILEPEMKDDKDPNNSNAWPCFECNQRFLTSEKLQKHLTIHDSPKSETKARMKRRKIAVPTNKLFKVVDGQTLLYTCPHCPKVFPRSYSLKRHLLIHPGAKAPRYECPSCGENFLHPYNRSRHMKIFHAGGTKEKENSRQNSPEWKCSTCNIIFGKSSLLSIHALVHTSNGIANDNFDNRCPQCDEQFKTRSELINHVAKHGRLQLPKSTKITPLASYKCTMCYKRFATKVRLQQHYLVHGAEDQKPLPCNICLKRFMNNSALSCHLKTHREDKHIFECPMCRELFNQVLMLKDHIETHRNDDETFTCPHCPRTFAKYSVIRKHIRAHHCERKHKCQVCAKRFPTVDKLRMHLLRHSDYREFRCANCDKQFKRKDKLKEHMTRMHDAQRAKCDQTSQSNQIKKFVPKVNPTDYNRFVYKCHQCLVGFKRRGMLVNHLAKRHPDVSPESVPELNLPILRQTRDYYCQYCEKVYKSSSKRKAHIVKNHPGAALPPSNRHKEADVAGLPNPTFSQTVGSITTTPQGCQWCHKQYASKAKLLQHQRKKHPNLMEPADQVPRPRNRPPRKRNHQPTIDDGNFMMNDYIQGCDIETDFMKPRIIKISDDVNLIGNGLELVGQQFVRMRDIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01057116;
90% Identity: iTF_00721452;
80% Identity: -