Basic Information

Insect: Stenichneumon culpator
Gene Symbol: -
Assembly: GCA_964017025.1
Location: OZ024781.1:8680714-8683812[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.5 5.3e+02 1.9 0.0 2 20 418 436 417 438 0.90

2 16 0.0031 0.3 12.1 0.6 2 23 447 468 446 468 0.95

3 16 0.0094 0.91 10.6 0.3 2 23 480 502 480 502 0.92

4 16 3.7e-05 0.0036 18.1 0.2 1 23 508 530 508 530 0.98

5 16 4e-06 0.00039 21.2 3.4 1 23 536 558 536 558 0.96

6 16 0.00067 0.065 14.2 2.2 1 23 567 589 567 589 0.96

7 16 5e-06 0.00048 20.9 1.1 1 23 595 617 595 617 0.98

8 16 2.5e-07 2.4e-05 24.9 0.2 1 23 622 644 622 644 0.98

9 16 0.0064 0.61 11.1 4.0 1 23 651 673 651 673 0.98

10 16 0.00026 0.025 15.5 0.2 2 23 693 714 692 714 0.97

11 16 0.00035 0.034 15.1 0.6 2 23 722 744 721 744 0.95

12 16 0.19 18 6.5 0.4 1 23 750 772 750 772 0.96

13 16 0.00014 0.014 16.3 3.1 1 23 778 800 778 800 0.98

14 16 1.8e-06 0.00018 22.2 2.4 1 23 806 828 806 828 0.97

15 16 1.3e-05 0.0013 19.6 2.1 1 23 834 856 834 856 0.98

16 16 4.9e-06 0.00047 20.9 0.1 2 23 862 883 861 883 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.5	5.3e+02	1.9	0.0	2	20	418	436	417	438	0.90
2	16	0.0031	0.3	12.1	0.6	2	23	447	468	446	468	0.95
3	16	0.0094	0.91	10.6	0.3	2	23	480	502	480	502	0.92
4	16	3.7e-05	0.0036	18.1	0.2	1	23	508	530	508	530	0.98
5	16	4e-06	0.00039	21.2	3.4	1	23	536	558	536	558	0.96
6	16	0.00067	0.065	14.2	2.2	1	23	567	589	567	589	0.96
7	16	5e-06	0.00048	20.9	1.1	1	23	595	617	595	617	0.98
8	16	2.5e-07	2.4e-05	24.9	0.2	1	23	622	644	622	644	0.98
9	16	0.0064	0.61	11.1	4.0	1	23	651	673	651	673	0.98
10	16	0.00026	0.025	15.5	0.2	2	23	693	714	692	714	0.97
11	16	0.00035	0.034	15.1	0.6	2	23	722	744	721	744	0.95
12	16	0.19	18	6.5	0.4	1	23	750	772	750	772	0.96
13	16	0.00014	0.014	16.3	3.1	1	23	778	800	778	800	0.98
14	16	1.8e-06	0.00018	22.2	2.4	1	23	806	828	806	828	0.97
15	16	1.3e-05	0.0013	19.6	2.1	1	23	834	856	834	856	0.98
16	16	4.9e-06	0.00047	20.9	0.1	2	23	862	883	861	883	0.96

Sequence Information

Coding Sequence: atgaaaattttatgcTCGGCAGCGTCATGCAAGTACTCGTCGGAGGGCGAAGATTCGTCGAACATTACCTTCATAAGCTTCCCGAATAACGACACtGCTTCGGCATGGGCGCACAATTGCGGTCGACCGGATTTGCTGGTGAAACCAGTGCAGGATCTTCACACCAGTCAGTACATATGTTCGGATCACATAGAGGATCGATTCTTCATAAGTAAAACAAATCCGATTGTCATAGCGCAAGGGGCTGTGCCTACTCTCTTCGGAGTGACAAGTTGTTCAACTAACATCATGGATTCGATGAAGGACAACTATCAGTCGGAACACGAGATAAACTCACTGCAATTGACGGAATGTATAAATGTCGATGATCGAGTCTGCCAGGAGCAAAATCTATCCGAGGTTCAGCCTGCCTaccgagaagaagaggagACGGAAAGCACGAACAGTCTTAGTTTTTGCAGTATAAATGTAAACATAGATCAGCTTCACGGAATGTCAGTCAAATTGAGCAGTCTGTGCCGAATTTGCGGCCATTCGACCGCGGATGGAACAGAAATATTTGGAGCCAAGGGTTTGGAGTTGagactgaaagaaaaaattgaattacacATGCCCATAAGCGTGCATCCTAACGAGTCAATGCCACGAAAGATCTGCTCGGACTGTTGTGACAAACTGGAAGTTGCTCACTCCCTGGTAGTCACTTGCTTGCAGGCAGACATGAAATTGAGGAGATTTTTTAACAACAGCAGCAAACCAGGCTATGATCCGAAATTCGAGGAGCTGGTAACAACGTGCGCACGAGAAATTGCCGACGAAATTAGCTTGAACAATGTCGTCGATAGCAACGATCCATCGAGCGACGCGAAGAAGATGGAGAATACAAGCTCCgtgaataaatttaattgcaaATGGAAGGGCTCTTCGGGCAATATCGAATTGGAGCAAGTGCAAATATGTCCGATCACCGAAACGAGCAACGAAAACATTTCGAGCTTCAAGTACGTTGTGCACTCGGATTTGAACAATTTGCTTCAAGCCCTGAGCGGCGTCAGTCCCAAGAACGACGAGGGGAGCAACGAATTGTCCGAAACGATCGTCGAGACTGTGGAGACCGAACAAAGAACACTGGTCTGTCCGAACTGTAACGATATGTTCGAAACACGGGATATCTATGAAAGCCACGCAATGCTCTGCAATGCCGAAGAAGACGCCGGTCTGAAAGAAACCATGGAACTGGAATCGAATATCGTTTGCCCCGTGTGCAGGCTCGATTTGGGCAGTGCCGAGTACTTCGAGAAACACAAGATTTCATGTGGCGACACAACGCCGCAATTGAATTGCCAGCATTGTGACGAATTATTTACCGACAAGGACGAACTCGGGCTTCACGAGATGTCGCACAATGAGAAAAGTCATTCCAGCGTATCGGATCGAAGATGCGGCTACTGCCTCGCTGTATTCGAAACGCGGAAGGAGCTGCAGAGTCACATTACCGATACTCACGACGGTCAGCCGCTCTACAGGTGCAGCGTCTGCGAGAAAACGTACGAGAAATGGTCAAACCTCGACGTTCACGAGGCTACTCATCGAGCCGATAAGCCTTATCTGTGCGATCTTTGCGGCAAGAGTTTTAAGCATTCCAACAATTTGAGAGGCCACAAGAGGACCCACCTAGACGAAGCGACGAAGAAACGTCACGTCTGTGACGTATGTGGTAGTGCATTTAGATCGAGATTTCACCTTCGGGAACACGCGAATCAGCATAATGGCAACAAGCCGTACACGTGCGAGGAGTGCGGAAAAGCGTTTTATAAGAGAATACAGTTGCGACAGCATCGACTGTCTCACGGAATGAAGAAGTATGCCTGCCCGATTTGCGGGGTGACATTCAATCGCCGAGGTAACATGAATGCACACATGAAGCGGCACGACAAGAGCGATGGAATGTATACGTGTAGCGTCTGCGAGTACAAATGCAATTCCATGAGCGAACTGAAGATGCACCGGAAGCAACACTCCGAAAGCGACATAATGGAGAGCATAAAGCTCAAGACCGCCGACAGGACTGTGTGGCAGTGCAAGATATGCGACAAGGTGTTTCCGAAGCGGGCCATTCTCTTGAATCACGAACGCACTCACACCGGCGATCAGACGAAAGTCGAGTGCGACAAGTGCGGCAAGAAATTGGCGAGCAAGAGTTCACTGAGATATCATAACAAGTCTATACACTCGACCGAACGGCCGCACATGTGCCAATTTTGCGGGGACGCCTTCGTGTCGAAAGAAGCGCGATTGATACACGAAAGAATTCACACCGGTGAACGGCCTTACATGTGTAAAATTTGCGGTATGCGATACAGATGCTCGAGTAATCTCAGTCAACATATGAAGATTCATTCGGCTCTGAGACCGCACGTTTGCCAATACTGCAACAAGACTTTCAGTCGGAGAGGTACCCTGAACGTTCACGAGAGAATTCACACGGGACTCAAACCGTTCGTCTGCGATATTTGCAGGCGATCATTCTCGCAGAAGAACGATATGTTGAAGCACACGAAGACTCATAGAGCGAAGTCAATTCGATGCGAGAAATGCGATGAGGTTTTCGCGACGAAAAGTGAATTGCTGAAACACTTGGACGTTCACGAGAACAGTGTCGTCGAAGATTCGGGCATACCGGTGTACGACGAGATAGTCGAGCCACTCGAATCGTATACGCTGGGCATACAGTGTCCGGCTGTGCAGTAA
Protein Sequence: MKILCSAASCKYSSEGEDSSNITFISFPNNDTASAWAHNCGRPDLLVKPVQDLHTSQYICSDHIEDRFFISKTNPIVIAQGAVPTLFGVTSCSTNIMDSMKDNYQSEHEINSLQLTECINVDDRVCQEQNLSEVQPAYREEEETESTNSLSFCSINVNIDQLHGMSVKLSSLCRICGHSTADGTEIFGAKGLELRLKEKIELHMPISVHPNESMPRKICSDCCDKLEVAHSLVVTCLQADMKLRRFFNNSSKPGYDPKFEELVTTCAREIADEISLNNVVDSNDPSSDAKKMENTSSVNKFNCKWKGSSGNIELEQVQICPITETSNENISSFKYVVHSDLNNLLQALSGVSPKNDEGSNELSETIVETVETEQRTLVCPNCNDMFETRDIYESHAMLCNAEEDAGLKETMELESNIVCPVCRLDLGSAEYFEKHKISCGDTTPQLNCQHCDELFTDKDELGLHEMSHNEKSHSSVSDRRCGYCLAVFETRKELQSHITDTHDGQPLYRCSVCEKTYEKWSNLDVHEATHRADKPYLCDLCGKSFKHSNNLRGHKRTHLDEATKKRHVCDVCGSAFRSRFHLREHANQHNGNKPYTCEECGKAFYKRIQLRQHRLSHGMKKYACPICGVTFNRRGNMNAHMKRHDKSDGMYTCSVCEYKCNSMSELKMHRKQHSESDIMESIKLKTADRTVWQCKICDKVFPKRAILLNHERTHTGDQTKVECDKCGKKLASKSSLRYHNKSIHSTERPHMCQFCGDAFVSKEARLIHERIHTGERPYMCKICGMRYRCSSNLSQHMKIHSALRPHVCQYCNKTFSRRGTLNVHERIHTGLKPFVCDICRRSFSQKNDMLKHTKTHRAKSIRCEKCDEVFATKSELLKHLDVHENSVVEDSGIPVYDEIVEPLESYTLGIQCPAVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00058882;
90% Identity: iTF_00058882;
80% Identity: iTF_01364713;