Scul005101.1
Basic Information
- Insect
- Stenichneumon culpator
- Gene Symbol
- bab1
- Assembly
- GCA_964017025.1
- Location
- OZ024770.1:7708091-7710120[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-10 3.7e-07 30.2 0.0 1 39 344 383 344 388 0.88
Sequence Information
- Coding Sequence
- ATGGAAGCCTCGGAGGAATTCTGTCTTCGATGGAATAATCATCAGCAAAATTTGCGTACGACAATGGCCGAGCAGTACAAAAATCAGATATTCACGGACGTTACACTGGGAGTTGAGGACGGTCATTCGATCCAATGTCACAAGATGATATTGGCTGCAAGCTCGCGGTATTTTCAATCGATCTTGATTGATTTTCCGTACGAGCATCCGATCGTAGTTCTCAACGACGTCAAGTATAAGGAAATCATGGCGATACTGGAGTACATGTACAAGGGCGAGGTAAACGTTCCGGGGAATGAATTGCCAGCTTTGTTCAAGGTTGCCGAAGCTCTGGAAGTTAAAGGTTTGGTAGGTGGAAATAAAGAGCCCCCGCAACCGGAAGTTTGCAATCGCAGCGTCATTAATACTGACGAGGTTTGCAAAAGTGTTAAAACTGACGAAGAACGAGCTTCGCCTCCAAGTTCGGCAAGCTCATCTCATTGGTCCACCGGAAAATCTCGAATTGTGAACGAACTCGAAGGGGCAAAGCTGTCGCCTTCTGCGTGGTCCGCGTTCTCCCAGGGACTTATTCCCGAAGGTCAAAACAGTCCAATAGCAGCTGCGGCCTTGCAGTCTTCGCTATCGGCGAGATACTCGCCCCTTCTCGGATCCCATGGCGACAGCGGCACGGCACTTTTTCCGCGCCGAAGACGAAGGAGAAAAATGTCGAGCAACAGTATAACGATTAATCGAAGCACCCCGATACTGAGAACGGCTCTCGATCAGGGTCAATTCGGTGGCTCCCGACACGTACCGCTCACTTGTCACGATTCACATTATCGAATAGCCAGTAACGGCGCGGTGAGCAACGATGATGCGATCGACTCTCATCCGCGATCGACTCGCAGTCCTGACGAGAATGAAACTTGGATGGTTGACGAGGATGACAACAGAGTCTCTCGACTATCGCCGTCTGAAGAGACAAGCGCAGGTAACGGTAACTGTGCTTCGGCAAGTAAATCCGGAACCGCTAAGCGTTACAAGCAGTACACTCATACTGACATAGCGGGAGCTATCGCGGCTGTTCTCGAGAATGGCATGAGCGCCAACAAAGCCGCAGTCATGTTCAGAGTGCCCTCGAGAACTCTGTATGACAAAATAAGCAGGGTTAAGAAGGAAGAGGAACTGAGGAACGGGGGTGGGGCTGGAATATCGAAACGAAGGCGCAATGCGAGCAGCAGTGGCGCGTGTTTTCCACACGGTATACTAGGGGCCAACGCTACCGGCACCATTCATGCTAATTATTCCGATACACTACCGATGGACGATCCGGCATCAGTTCTGGAGACTACGTTCGCCGAGAGTCGCGACAATTCGATCGATCATCATGCCAAGGTTAACGATAGCGTTAACGTGGACGGAAAAAGTCCGAGTCTGGGTCCTCGACTTCCGAGGCATGCTCAGGTATCGCATCGTGAGGAGAGCGATAACGAAGCCGAGGATCTCTCGGTGAGCCGTAAATCGGATGTTGGGGTTATCATGCCAACGAGAATTGTTATCAAAGAGGCTATTTAA
- Protein Sequence
- MEASEEFCLRWNNHQQNLRTTMAEQYKNQIFTDVTLGVEDGHSIQCHKMILAASSRYFQSILIDFPYEHPIVVLNDVKYKEIMAILEYMYKGEVNVPGNELPALFKVAEALEVKGLVGGNKEPPQPEVCNRSVINTDEVCKSVKTDEERASPPSSASSSHWSTGKSRIVNELEGAKLSPSAWSAFSQGLIPEGQNSPIAAAALQSSLSARYSPLLGSHGDSGTALFPRRRRRRKMSSNSITINRSTPILRTALDQGQFGGSRHVPLTCHDSHYRIASNGAVSNDDAIDSHPRSTRSPDENETWMVDEDDNRVSRLSPSEETSAGNGNCASASKSGTAKRYKQYTHTDIAGAIAAVLENGMSANKAAVMFRVPSRTLYDKISRVKKEEELRNGGGAGISKRRRNASSSGACFPHGILGANATGTIHANYSDTLPMDDPASVLETTFAESRDNSIDHHAKVNDSVNVDGKSPSLGPRLPRHAQVSHREESDNEAEDLSVSRKSDVGVIMPTRIVIKEAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00059579;
- 90% Identity
- iTF_01364786;
- 80% Identity
- iTF_01364786;