Scul020660.1
Basic Information
- Insect
- Stenichneumon culpator
- Gene Symbol
- -
- Assembly
- GCA_964017025.1
- Location
- OZ024780.1:4692309-4694602[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-10 1.2e-07 31.7 0.0 2 38 22 57 21 60 0.96 2 2 9 9.7e+03 -3.2 0.0 30 38 85 93 85 96 0.84
Sequence Information
- Coding Sequence
- ATGTTTGTCGAACGTGAAGTCGCGTGGACGTATTGGCCTGCTCCTCGAAAGTTTCACGACAATCCGGACGACATGCACAACGCGATGGAGGCAGTGAGGAACGGCCTGTCTCTGAGGAAGGCAGCGGCGATGTTCTCTGTTACCAAGTCCAGACTTCATCGTTACGTTCGTCAGGATGCGAGGATGCTGGACATTTTGAACAATCAACGAGTGACTTATCCTTGCAAGAATTGCGGCAAGGTTTACAACTACTATTCGAGCTTGGCGAGACATTTGAAGCACGAGTGCGGGGTGGAACCGAAATTCCATTGTCCATTGTGTCCTTACAGAACCAAGCACAAATCAAGCTTGAACACGCATCTTAACGGTAGACACATGAAGCTATTGAACGACTTCTACGTGCTGCCGAATGGTCCCTGGCGCAGAGACGGACCGGAAATAATCCAGAAGATCGAGAGCCGCAAGTATTTCTGCCCGAACTGCACCGCGTCGTTCGACGTCGAGCAATGGCTGGAGCATCACATGAAGGAGTGCAAGAGACCGGCCGTACTGCACTGTCCTCACTGCTCGCACTACAAGAGCAAGAAGAAGTACAATTTGCGCAGGCATATATTGCACATTCACGGCCGGGTACTTTAA
- Protein Sequence
- MFVEREVAWTYWPAPRKFHDNPDDMHNAMEAVRNGLSLRKAAAMFSVTKSRLHRYVRQDARMLDILNNQRVTYPCKNCGKVYNYYSSLARHLKHECGVEPKFHCPLCPYRTKHKSSLNTHLNGRHMKLLNDFYVLPNGPWRRDGPEIIQKIESRKYFCPNCTASFDVEQWLEHHMKECKRPAVLHCPHCSHYKSKKKYNLRRHILHIHGRVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00059052;
- 90% Identity
- iTF_00059052;
- 80% Identity
- iTF_01364998;