Scul005102.1
Basic Information
- Insect
- Stenichneumon culpator
- Gene Symbol
- lolal
- Assembly
- GCA_964017025.1
- Location
- OZ024770.1:7720383-7722089[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-11 1.2e-08 35.0 0.0 2 45 364 407 363 407 0.94
Sequence Information
- Coding Sequence
- atgGCCAACCTCGAACAGCACTACCGTCTACGCTGGAACAATCATCAAGCGAACCTGATCGAGGCTTTCGATCAACTCCTCATAAACGAAGAATTCGCCGACGTTACATTGGGCGGTGAAGATGGAGCACACATAAAATGTCACAGGATGGTCCTAGCTGCATGTTCAACGTATTTCAAGAGCTTGTTCACGGATCTCGGCCACACGCATCCGGTGGTCGTACTGAAGGACGTAAAGTGCAGAGAGATAAAGGCTATATTGGAGTACATGTACACGGGTGAGGTAAAAGTTGTGCAGGAGGAATTGGCAGCATTGCTCAAGGTCGCCGAGCTTCTGAAGGTGAAGGGTCTCGTCGCGACGGATGAATCGAGCTCTTCCCTCTTGGAAGACAGTAGACACGAAGAAAGAATAAGCACTAGTACCAGCAGCAACGCTGCCAATAGTTTGGAAGGTGCGACGGGTGTTGGGGCCGGCAGAGGTCACACTTCGCCCCCTCATTCGACAAGCTCACCGTACTACGGCTACGGCGGACAATCACCCAACGGCCAAGCTCATCCGGCGGATTATCAGACACCGTTGTGGGCAGCCCGACAGAGTCTCGCTCTGGCTGAACAAAATTCGGCGATCGCCGCGGCGGCTCTTCAATCATCGATATCCGCTAAACACGCGTCGCTCTTCGCGTCTCACTGGGACAACAATGGGGCCGATGCTTCGACACCGCACGGTAAtaggaaacgaaaaatttcaagcGGCAATATTATGATGAGAAACAACGACACACCGATCCTGAGAACGGTTCTTGGTCAAGGTCATGCCGACAGTTCTCAGCCGATAGCCAATCTTCATCCCGATATTACTCATTATCGAACGACTCACAGCAATGGATCGGCCAACAACGAGACCGATGATAAACGTATCGGCATGGATCCATCAAATTGTCACTCGTCGCAAAATTCATGCACCGGTGAAGCCTCCCTGACGGAGGAAGACGAGAAGAAACACAAGAGTTTCTTCGACGATTCGAAAGCAGgTATAGCCAATTACGTTCCGACCCAAAAACCCGAATGGAAGCGTTACAAGCAGTACACAAGAAAGGACATCGAGGATGCTATAAACGCCGTTAAAGACGGCACTAGCGCACTGCAAGCAGCTCGGAAATTTGGCGTACCATCGAGGACTCTCTACGACAAAGTCAAGAAGCTCGGGATCACTACATCGAGACCGTTCAAGCGTGGCTCGAATGGCGGCAGCGCCTGTTTCCCATTCGGTTTAGGTGGTAACGTTAACGGTAGAATTTACGACAATGAGAACAGCGGCGGTGCACCGATTGATAATTCATCTGCTGTACTCTCGGAGTCTGCCTTCTCGGAGAATCGAGACGACTCGAATGACGACCGCGAGGCAATGATGGACGTTACTCAAACTGGCTCTCAGCTTCCACTTGACTATTTTCCGCCAATGCCACAGcagcaatcgcaatcgcaatcgcaatcgcaatcgcaatcgcaatcgcaatcgcaattacaattacaatcaTCGGCTCAGGAAAGTGATAACGAGGTCGAGGATCTCTCGGTGAGCCGTAGATCTGATGTTCGCGTTATAATGCCACCGAGTGTTGGTATCAAAGAGGAAccatag
- Protein Sequence
- MANLEQHYRLRWNNHQANLIEAFDQLLINEEFADVTLGGEDGAHIKCHRMVLAACSTYFKSLFTDLGHTHPVVVLKDVKCREIKAILEYMYTGEVKVVQEELAALLKVAELLKVKGLVATDESSSSLLEDSRHEERISTSTSSNAANSLEGATGVGAGRGHTSPPHSTSSPYYGYGGQSPNGQAHPADYQTPLWAARQSLALAEQNSAIAAAALQSSISAKHASLFASHWDNNGADASTPHGNRKRKISSGNIMMRNNDTPILRTVLGQGHADSSQPIANLHPDITHYRTTHSNGSANNETDDKRIGMDPSNCHSSQNSCTGEASLTEEDEKKHKSFFDDSKAGIANYVPTQKPEWKRYKQYTRKDIEDAINAVKDGTSALQAARKFGVPSRTLYDKVKKLGITTSRPFKRGSNGGSACFPFGLGGNVNGRIYDNENSGGAPIDNSSAVLSESAFSENRDDSNDDREAMMDVTQTGSQLPLDYFPPMPQQQSQSQSQSQSQSQSQSQLQLQSSAQESDNEVEDLSVSRRSDVRVIMPPSVGIKEEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721402;
- 90% Identity
- iTF_01364767;
- 80% Identity
- iTF_01364767;