Scul015855.1
Basic Information
- Insect
- Stenichneumon culpator
- Gene Symbol
- -
- Assembly
- GCA_964017025.1
- Location
- OZ024776.1:8091809-8093219[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-12 3.3e-09 36.8 0.0 5 36 1 32 1 40 0.90 2 2 5.4 5.8e+03 -2.4 0.0 30 36 204 211 204 213 0.84
Sequence Information
- Coding Sequence
- ATGGAGAAGGCACTCGAAGCTGCTCGAAATGGAATGTCCATCTCCGACGCAGCTACGACTCATGGTATACCGAAATCAACGTTGCACGGCAGATACACTTGCAAAGTTTCTGATCAGCGTAAGATGGGACCGAAATCGATTCTTACCGAGGTAGAAGAAGCTCGTTTGGAAAAGTGGATTTTAGGCAAGGCTCAGGTTGGCTTTCCGATGGATCCAGACGAGGTAAAAGATGCTGTACAGCGAGTCATGCAAGACGTTCCTCGAGAAAATCCAATCACGAATAATCGGCCAGAAGGGCTGAGACAGCGGTTTTCTGAAGCGAGCGACTTTTTGAAAGCGAACAATGCTCTTGATGTTCTCAACCGACGTCGTAGCATATTCAACGGCGACGAAACAGGTGTACAAACTTGTCCGAAAAGTGGTTTGCTCTTAGGCGCAAAAGGCGAAAAGAATTTCTACGAAATTGCGAACGGAGATCCAATATTCGCAAAGAGTTTGAAGATTTACCAATCTCGACAGAGGATTTTGCTTCAGCGAAGAAGGTCATCGAGCATGTTGTTGGATCCGCAAAGGCTAAATTGCAAAGAAGTGCAATCCATGATGACAATGCGATCGACCCTGTATTTGCGCTGTGGACAATTTGCACAGATCATGTTGAAGGTATCCATACTCCGAATGATGAAGAAAGGTTTGCGGACATCTTCCAGAGGACTCAACAAAATAACACTCTGA
- Protein Sequence
- MEKALEAARNGMSISDAATTHGIPKSTLHGRYTCKVSDQRKMGPKSILTEVEEARLEKWILGKAQVGFPMDPDEVKDAVQRVMQDVPRENPITNNRPEGLRQRFSEASDFLKANNALDVLNRRRSIFNGDETGVQTCPKSGLLLGAKGEKNFYEIANGDPIFAKSLKIYQSRQRILLQRRRSSSMLLDPQRLNCKEVQSMMTMRSTLYLRCGQFAQIMLKVSILRMMKKGLRTSSRGLNKITL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -