Basic Information

Gene Symbol
JARID2
Assembly
GCA_964017025.1
Location
OZ024772.1:6396009-6403592[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2 5.4e+03 -1.7 0.2 51 83 153 185 142 186 0.72
2 2 9.2e-23 2.3e-19 70.0 0.0 6 89 1326 1407 1322 1407 0.94

Sequence Information

Coding Sequence
ATGGTATTGGGTCGAAATGACAAGAGGAAAAGGAAGGAGGGCGATCTCGTGGATCTCATGGATCCACTCTCAGAGTCACCCAAGagAACTAAGGTCCATGCCCAGAGAAAGTTTGCTCAGGGAGCAGCGACTGTGTTCAGTCCGGCGCCGACTATGGTCAAGGAAAAGGAGAAAACGAAACCTGCTGTTATAACCGAGCTCATAACGCACAAACGTCCCAATACTGAAGACTTCCTCACATTCCTGTGCTTCAGAGGTACTTCGATACTGCCGCCGAGTTTGAACTTCTTCAACGTCGGAAGTAAGAAAGAGAGGAGCGAAGGGAAGGTCTCTACGTGTGCGAAGAGCAACAGCAGATCGTCGTCATCGGCGTCGGTTCCATCGACCGCAATATCGAAGACGGATTCGAGTTTGAATTCGCAGAGCAAGGTCGGCGCGAAGGGCGCGACGACAGCGAAGAAGAAGGTACAAGCATCGGTCGCCCAAAAGCCGCCCCTGAGCAAATACAAGACCGCGACCTCGACCGTTCAAGCACTGAAGAAAAAGTACCAGGAGCAGCGTCTGGCGAAGCAGCGAATAAGAAACAAATTCAAAGCCTCGTGCGTGATGAGAACGCGCTCGTCCACGGAGCGGGTCGTTCTAAAGTCCGTCGCGAAACTGGCGCCGAGGAAATTCCTCGCGCGAAACGAGACGAAGAAGCGGCACGGTTTGCGCAGCGGCGGTCTGGCCGagaaggtaataaaaaaatcgagcgtGTCGCAGCCGAAGGGAAGACCGATCGGCTCGAAGCCGAAGAGGAGACTGGTCGTGAAGGAGCAAACGAGCGAGTCGTCCGAGTTGGAGAGCGCCACGTCGGACGATGACGCGACGACATCAAAAAAGGCTGCCCAGCTCAAACGCTCCGGCAAGGCGATCCAGAAGAAAATCTGCACGCGCAGCAAATCGGAGATGAGGCGAATAACGCGCTCGCAGCGAGAGAGCGCGCCGCCGGGCCAGTCGGCAATGTCGAGAAGACCATCGAGAAAGACCAAGGAAGCAGCGGCCGTGTACATGGAGATTCTGGGACGAAAGTTGGTGAGTCCCGACATCGAGAACGACGACAATCTCTCGGTGGACAGCTTTCCGGAACTGCCGAACGCCCGGCGCACCGCCCAGGCCGAGAGCGAGATAAAGGCCAAGTCGAAGCAAGCGAGCAAGAACCGAGAGACCAAGGAGAAGGAATCGAAGCCCGAAAATCCCAAGTCGAAAGCCAAAGTCGAGAAGCCGATCTTGAAGAGCAGCAAGAGAACGCTGAGGGTGCGAAGGTACTGCGAGCTCGACAGCGAGGACGAGTCGGAAACCTCCGTCGAGCCGGACAAAACGAGGCACGTGACGAGGCGCAGCGTCAGCAAGACTGAGAAGCCTGCGACCCGAAGTCTTCGATCGTCCTCGCGCAACCAACCGGCGAAGAGCGAAGTCTCTTCGCCGGCCAAAGTTCCgaaggagaaggaaaaaatcaCGACGGCAAAACGCCCGAAGCctccgccgaagaagcccgaGAGCGACGAGTCCGAGGAGGAGTCGCTGGGAACTCTGCTCgacaaattgaaaaagaaaaaggaggaaaaaTCGGAGCCTCGCAAATCGGCGACTCAAGTCGAAGCTCCGACGATCGAGGTCCCGCCCGAGCAACCGGAGTGCCTCGAGCGATCCGAGAATCCCACGCCCTCCCAAGTGTCCGACGACGAGGAATCGTTTCGCGGTTTCACGAAGAAAGCGATATCGAAGGTCCTGAGTTCGTGCAACAGCCACGTAAACGCGAATCTCCTCGCCTCGGAGGAGGCTTACGGAAAACTGGAAGCGCCGAAAGCGCAAGAAACGCCGAAGCTCGAGGTTTCCCGGGAAGCGAAACAATCTCCAGCGGACGAGAAATCCGAGCCGGCGACGAGCGTTGACGAGGTCAAAACTCCAGTCTTCACGATTGTGAAACCCGTGCAGGAATCTACGATCGCCACTCGAAAGCTCGTGATCGCCGATCCCGAGGAGCTTCCCAAATCTGAAAATAGATGCAACCACGTGGCCGAGAGTCCTCCGATGAACATAATCGACATGCCGCTCACAGGTATTCACGGTCGTAAGGCGCGCGTCAACATGTCGACGGAGCAGATAGAGAAGTGGTTGAACGAGAGTTCGATGGCGAGGGCGAATCAGAGAAAGCAATCGGACGAGACCTCGCAGAATTTTCCATTCGAGGTTCCCGAGAAGGTTACCAAGCCGGACATGAATCACTTGTCGATTCCGACGAGAATTCAGCACCTCGTCAGGCCGGTGAATGTGACGATAGCGAAGCTCGCCGAGAAAGCGGGAGTTCGCGATCGAATGGGACTGACGAGCAGAATCGCTCCTACCTTCGTAACCGGAGCGAGAATTCCTCTCGCGAAGCCCCTCAACGTACCGACACCGAACAGAAACAAGATAAACGCGGACATAAAGGAGATAATAAAGGGCAGGAGCGCGACGAAGGCGACGAAGGAGACGTCGACGGGCGAGGAGAGCGACACGGTATCGAAGTCCGACCAGAACTCCGTCGACGGTTCGCCGGACAAGAAGTCGACGCCAGAGAAGAAGGGAATCTTTCAGCAGCGGAAGACCTTTCTGCCgagagtgaaagagagaaaaaccGCTACGCCGAACGCGAACGCCTTCTCGCCGGAGAACGAGAGCAGCGTCTACGCCTTCGAGAGCGACACCGAAGTACCGATAAACACGCCATTCAGGAGAAAGCTGAAGGAGCTCGGACACAAGTGCGGAGCGCCTTCGGAGCCCGACACTTCGAGAACGGGCGATGACTCCAAGTTCAGCGAGCTCGGCACGAGCAGCGAGACGGACGGCAAAAGCTCGTCGAACAAGTTCGCTATGCCGAAGAGTTTCGGTAACTTGTCGAATGTTCAGGTATTGCCGCTTGGTAAAATGCCGACCGAATGGGGCGGAGTTAATTGCAGCGCCTCGATAGCCGTTCAGGTAAACTTCGACGAGCAGTCGCAGGAGCTTCAGCAGCGTGGCCAGGAGGAAAATGCGATGCTCCAGGAGAGCGAGGATCCGCAGCAAAAGTCCACGGAGATTTCGACCCAGACGGAGAATACGAACGACAACGAGGACGACAATGATGGGGGGCACGTTTTTTATATTCCGCTCCAGACCGTCACGAGAAACGGTCCGAATCTAGTTCAGGGTCAGCAGCTTATACAGGGAGTGGCCGTGAAACTCGGCACCGAGGGACCGAACGGGCCGAATCAGCGGGTCTTGTTGCGAGCTCAGCTCGTGACGAAACCACCGCTGGCCGTTGCTCGATGCCCTCCGGTCGGCACCGTTCAGCCGACGACCAGAACTCCACCGAACTCGACTAGCAGCACGTCGGTGCTGGACCATCCATACGCGGTCGTGGATCCTTCGGTGGCTTCCACTTCGGCCTTGCCCGTTCCGGTTGCCGCTCCGGTGCAGACGGCTGCGGATTTCCAGCCACCGCAGCCGCAGCCACCTCTCGTCAGGGCTTCCTCGAATCTAGGTACCAAACAGGGCTCGTCCGGGTCGAACGGTACCGCGGAGAAAGTTACCAAGTCGCCGAAAGCGGCGAGGGAGCGAAAAGCCTCGGTGGACTCGACAAAGACCGGCAAAAGATCTTCGGCGAAATCGCGAGCGAAAGTCGCGGAGGTCTTGTCGCCGAGCAACACGACGGCGTTCCCGGGGTCGGCGAACAGCAACGCCGAGGCTCGACTCGTCGAGGCACCGACGTTTCATCCGACAGAGAAAGATTTCCAAGATCCGCTGGAGTACATCGACAAGATCAGACCGATCGCCGAGAAGTTTGGTATTTGCAGGGTCGTGCCGCCTGCGAATTTCAAGCCGGAGTGCAAGGTGTCGGACGACATGCGCTTCACTGCCTACAATCAGTACGTTCATCGAATGCTTCATCGCTGGGGACCGAACGTCAAGGAGATGATGGCTATAAAGAAATATCTCGCTACGCAGAGCATCACATTGACTCATCCACCatggatcggAGGTATGGAAGTCGATCTGCCACACTTGTACCAAACAGTCCAGAGTCTCGGTGGTCTGAAAGAAGTAATCGAGAAGAAAAAGTGGCAGAAAGTCGCTGACGGTATGAAGATACCAAAATCGGCTCAGGACCGCGTAACGAAACTCGACGATATATACTGCAAATATTTGCTACCATACGACACTCTTTCACCAGAGGAACGGGGAAAGCTGTTCGACGATGTTGAAGAAGATTGGAAGATAAGAGAGACGAAGACTCTACAGAGGCTGGACGCTCAGTCGAACGACAATGATGACGAGGACGATGATGATAGTTCCGATGAAATCGAAGAGTGCATTGTCAAAGGTCGCAACATGCCGTTGAACGCCTTCTATCGCATCGCCCGAAACACTCAACGGATGTGGTTCGGCGAGAATCAACGTTCGGGAAGCGAGGCCGAGGGCGCGTCGGCCGGCGAAGTCGAGACAGCCTTCTGGAAGCACGTGGCCGAGCGGAAGCGTCACGTCTGCGTTCATGCAGCGAGTATCGACTCCAGCGGTCGAGGCTTCGGATTTTCCGTCGCGAAGAACAGTCCCTTCGCCAGACATCCGTGGAATCTCAAAGTATTGACCAACAACGCTGGCTCGGTGCTTCGAGCTCTGGGACCTCTCATGGgCGTAACTGTACCGACGCTGCACGTCGGCATGCTCTTCAGCGCATGCTGCTGGTACCGCGATCCTCACGGGCTTCCCTGGATCGAGTATCTTCATACCGGCGCCAAGAAGATCTGGTACGGAATTCCCGACGAGCACAACAACAACTTCAGAGAGGCGTTGTCGAAAATGGTTCCACGATACTGCAAGAAAAAGACTATCTGGCTCCCATCCGACACGGCGATGGTGCCTCCTGAGATGTTGGTCAGCAACGGAGTTCCTCTCTGCCAGACGGTCCAGGAACCCGGTCAATTCATCGTCGTCTTTCCCAAAGCGTTCACCTCGAGCATATGCACTGGTTACGTAGTTTCCGAAAGCGTGTACTTCGCCCAACCCGCGTGGCTCGAAAATGCCGAGCAAGTGTTCAAGGATCTCCAGGACAGCTGCGAGCCATCGATATTCTCGTTCGAGCGACTGCTCTTCAGCGTCATCAATGATTCGCGCTCCCATATCGACGTACTGAAGCAGatTATGCCGGCGGTCTTGAAAATTCGTGAACGCGAGCTAGAGTATCGCAAGCAATTGGAATACATAGGATTGGCCAATAAGGAAAAGCTACCGCTGCCCGACACGGGCAAGGGAAAGAAAGGGAAGAAGGTGAAGGAGGAGGACGGTGATTTCGAGTGTGAAACTTGTCGGGCCAATCTGTTCGTCTCTTTAGTTAATAATTCCAACGACGACAGCGTATACTGCCTGCCTCACGCTCTTCAGTTGATCGTGAGAAAGCGACaagtattgaaaaattgtacactGATGTACGCTTATACCGAGGACGAGTTGGATGACTTGATACACAAGCTGGAGGACAGGATCGAAGCCAAATCGAAGAAAGCTAATCAAATGAGGCAATCTAAGTAG
Protein Sequence
MVLGRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGAATVFSPAPTMVKEKEKTKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGSKKERSEGKVSTCAKSNSRSSSSASVPSTAISKTDSSLNSQSKVGAKGATTAKKKVQASVAQKPPLSKYKTATSTVQALKKKYQEQRLAKQRIRNKFKASCVMRTRSSTERVVLKSVAKLAPRKFLARNETKKRHGLRSGGLAEKVIKKSSVSQPKGRPIGSKPKRRLVVKEQTSESSELESATSDDDATTSKKAAQLKRSGKAIQKKICTRSKSEMRRITRSQRESAPPGQSAMSRRPSRKTKEAAAVYMEILGRKLVSPDIENDDNLSVDSFPELPNARRTAQAESEIKAKSKQASKNRETKEKESKPENPKSKAKVEKPILKSSKRTLRVRRYCELDSEDESETSVEPDKTRHVTRRSVSKTEKPATRSLRSSSRNQPAKSEVSSPAKVPKEKEKITTAKRPKPPPKKPESDESEEESLGTLLDKLKKKKEEKSEPRKSATQVEAPTIEVPPEQPECLERSENPTPSQVSDDEESFRGFTKKAISKVLSSCNSHVNANLLASEEAYGKLEAPKAQETPKLEVSREAKQSPADEKSEPATSVDEVKTPVFTIVKPVQESTIATRKLVIADPEELPKSENRCNHVAESPPMNIIDMPLTGIHGRKARVNMSTEQIEKWLNESSMARANQRKQSDETSQNFPFEVPEKVTKPDMNHLSIPTRIQHLVRPVNVTIAKLAEKAGVRDRMGLTSRIAPTFVTGARIPLAKPLNVPTPNRNKINADIKEIIKGRSATKATKETSTGEESDTVSKSDQNSVDGSPDKKSTPEKKGIFQQRKTFLPRVKERKTATPNANAFSPENESSVYAFESDTEVPINTPFRRKLKELGHKCGAPSEPDTSRTGDDSKFSELGTSSETDGKSSSNKFAMPKSFGNLSNVQVLPLGKMPTEWGGVNCSASIAVQVNFDEQSQELQQRGQEENAMLQESEDPQQKSTEISTQTENTNDNEDDNDGGHVFYIPLQTVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQRVLLRAQLVTKPPLAVARCPPVGTVQPTTRTPPNSTSSTSVLDHPYAVVDPSVASTSALPVPVAAPVQTAADFQPPQPQPPLVRASSNLGTKQGSSGSNGTAEKVTKSPKAARERKASVDSTKTGKRSSAKSRAKVAEVLSPSNTTAFPGSANSNAEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPANFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDDVEEDWKIRETKTLQRLDAQSNDNDDEDDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGSEAEGASAGEVETAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKKKTIWLPSDTAMVPPEMLVSNGVPLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPAWLENAEQVFKDLQDSCEPSIFSFERLLFSVINDSRSHIDVLKQIMPAVLKIRERELEYRKQLEYIGLANKEKLPLPDTGKGKKGKKVKEEDGDFECETCRANLFVSLVNNSNDDSVYCLPHALQLIVRKRQVLKNCTLMYAYTEDELDDLIHKLEDRIEAKSKKANQMRQSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01207132;
90% Identity
iTF_00058465;
80% Identity
-