Basic Information

Insect: Stegana nigrithorax
Gene Symbol: stc
Assembly: GCA_037044495.1
Location: JBAMBQ010001743.1:1631422-1635261[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.9e+04 -4.3 1.6 15 19 511 515 510 515 0.81

2 13 0.08 7.7e+02 0.4 1.9 4 11 544 551 543 552 0.90

3 13 1.1e-06 0.01 15.9 14.5 4 19 558 573 556 573 0.91

4 13 1.9e-07 0.0019 18.3 14.7 1 18 609 626 603 627 0.86

5 13 5.4e-07 0.0052 16.9 16.7 1 19 667 685 667 685 0.97

6 13 2.3e-05 0.22 11.7 15.7 4 18 733 747 726 748 0.86

7 13 0.05 4.8e+02 1.0 12.2 1 11 788 798 788 810 0.91

8 13 3.6e-08 0.00035 20.6 14.3 1 18 815 832 815 833 0.94

9 13 2 1.9e+04 -4.5 1.2 6 10 862 866 862 866 0.88

10 13 2 1.9e+04 -6.8 9.0 10 18 880 889 870 890 0.76

11 13 8e-07 0.0077 16.3 14.2 1 16 926 941 926 951 0.87

12 13 3.1e-06 0.03 14.5 14.7 1 19 958 977 958 977 0.97

13 13 0.45 4.4e+03 -2.1 0.7 7 12 992 997 986 997 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.9e+04	-4.3	1.6	15	19	511	515	510	515	0.81
2	13	0.08	7.7e+02	0.4	1.9	4	11	544	551	543	552	0.90
3	13	1.1e-06	0.01	15.9	14.5	4	19	558	573	556	573	0.91
4	13	1.9e-07	0.0019	18.3	14.7	1	18	609	626	603	627	0.86
5	13	5.4e-07	0.0052	16.9	16.7	1	19	667	685	667	685	0.97
6	13	2.3e-05	0.22	11.7	15.7	4	18	733	747	726	748	0.86
7	13	0.05	4.8e+02	1.0	12.2	1	11	788	798	788	810	0.91
8	13	3.6e-08	0.00035	20.6	14.3	1	18	815	832	815	833	0.94
9	13	2	1.9e+04	-4.5	1.2	6	10	862	866	862	866	0.88
10	13	2	1.9e+04	-6.8	9.0	10	18	880	889	870	890	0.76
11	13	8e-07	0.0077	16.3	14.2	1	16	926	941	926	951	0.87
12	13	3.1e-06	0.03	14.5	14.7	1	19	958	977	958	977	0.97
13	13	0.45	4.4e+03	-2.1	0.7	7	12	992	997	986	997	0.72

Sequence Information

Coding Sequence: ATGTGGCGGTTTGGCAGTCAAGCTGAAGACAACGCTGCGTCAACGTCGGCTGCGACCGCGAACGGCGGTGAAGGCGTGTTGCCAGATGTGGCAATGTCGAATCATGGCAATGGCTTTTCGACGGCACCGCCGACTGCcgcggctgcagctgctggtGTAAGTCTTGCTGAATCATCATTTGATTTCGACAGTGGCGGGTCACTTGGCGAAATTGCCGCcgctgcaggtgttgctggcGTCGCGAATAACAACTACGTGAATTTTAATCAGTTTATGCTTCAACATAATATAATTGGCAACCAGCAAGCGAACACGATGCAGCACCCATTTTCCAACGACTTCGGTATGCCGGAGTCGACGCGTAATGGTTATGTGAATTATGCGACAAGTGGGATTGCATCAAAAGCTCCAACCGCTGATTTAAAAACGCCGGCAATAAGCACAACAAATAATCAGACTTTTGAGACGCTATTTCCTAatccaaatgcaaatgtttttcaatacaacaacaacaacacgtttGGCATGCAAGGCGCCGACACTAACTATGAAGCACCTGCCGCAAGTCAGACCTATTATAACTACTACGCTCCTACTTTTGAGAATATTGGGGGTGTGAATTACTTTGGTAATCCATTTGCCACAGGTTTTGATCTCTGCGCAAATACGCAACTGCAGGTGGATGCGCCGGAATTTGTGCCGAGCTTTGCCAAGCTAAATCTTAATGGTGAGCATCCGGTGGAAGGCAAATCCGTTGCAACAAATGGCAATGAGACTCCACCAGCAGATGTcgcaaaagaaatgaaaactctGCCACAAAAGCCAAATTCAACAACTGCCGAAACtgaaacaacaagaacaacagcctCAGGCCAAGCTATGCAAGCCACTGGTGCCatgagcaaacaaaactcTCGCGACACACCCAACTACGAGCAAACGGAACGTGAGCAAAGAAATGGCGACGGCGCTGCTGGCGGCGGAGTAGGCAATGGAGTTAATGCTGCTGCGTTTGGTAATATTGGCATGCGTCGCGGTGGCGCCGGTGTCAGCGCTGGTCGTCGCAATATGGACTATCGTGAGGAGCGCGAGGATCGCTACGTCGATCGCTTTGATAAGAATCGTGAGGAGCGCGAGGATCGCTATGTCGATCGCTTTGATAAGAAGCCACAGCGTCAGCAACGGTATGACAATCATCGCAGCAATAAACGACGTGATGATTGGAATCGCAATCGTGATCGGATAAATGGTTTTCCTGTTGCGGAGCTCGACAATAGCAACGAGAGTCCATTGGACTCGCCTGAGAAGAAAACGTCGCCGAAGAAGAACAACTATGTGGAGCATGAGAAGCTATCGCAGCGTGAGAAGCTCATACGTGATATTGAGACGCGTCGTCTGGAATGCTTGGTTTGCGTTGAGTCTATCAAGTCGCATCAGTCTGTCTGGTCCTGTCAAAATTGCTATCACATAATGCATTTGAAGTGCATCATAACTTGGGGATCCGCATCGAAATCTGATGAGGGTTGGCGCTGTCCTGCCTGTCAAAATGTTGAGAAAGATGTGCCGCGTGATTATTACTGTTTTTGCGGCAAGCAGAAAAATCCGCCGTGCAATCGTCAGGACTTGGCGCATGCTTGCGGCGAGGTTTGCTGTCGCATCGAAGGATGTGCGCATGCGTGCACTTTGCTCTGTCACCCGGGGCCATGTCCGCCGTGCCAGGCGAATGTGAAACGCTCCTGCGGCTGTggaaaaacaacgaaaaccaTGCAGTGCGCCATGAAGGACGCCATCGAATGCGATGCCATATGcggcaaattattgaattgcGAGCAGCACAACTGCCAGGATAAATGTCACGAAGGCAAATGCCCACCATGCGCCGAGAAGGTCACGCAAAAGTGTCATTGCACCAAGCAGACGCGTGAGGTGCTGTGCATGCGTGAGACGCACGACAAGCATTACTATTCCTGCGGTAAACCGTGTGGCCGCGATCTGACATGTGGCAATCATAAGTGCAAGGATTGCTGCCACGCCGGCGAATGTCGCGCCTGCAAGATGAGTCCGGCTATAGTGACTTCGTGTCCATGCGGCAAGTTGCCCGTGCTGGCCGGTGCACGCAAGTCGTGTCTCGATGCTATACCCACCTGTGAGGGCATCTGTGGCAAAACGCTACGCTGCGGCAAACCGGCACATCCGCATCAGTGCACGAGTAAATGCCACCTGGGCAACTGTCCACCGTGCAACAAACAGACTGCCGTCAAGTGTCGTTGTGGCCACATGGATCAGATGATCAAATGCCGCCAGCTGAGCACGCGCGCCGACGATGCACGCTGCAAGAAACGCTGCACAAAGAAACGTTCCTGTGGCAAGCACAAATGCAATCAGGAGTGCTGCATCGACATCGACCACATCTGCCCACTGCCGTGTAACTATACGTTGTCctgcaacaaacacaagtgCGATCAACCCTGTCACCGTGGCAACTGCCCGCCATGCTATCGTTCGTCGTTCGAGGAGCTGTACTGTGAATGCGGCGCTGAGGTCATCATGCCGCCGGTTGCCTGTGGCACCAAGCGGCCCGTCTGCAAGCGTCCCTGTTCGCGTacgcatgcatgcacgcaTGCACCACAGCATAACTGCCATTCGGCGGCCACGTGCCCGCCGTGCATGATCTTCACGACCAAGTGGTGCTTTGGTCAACATGAACAGCGTAAAACCATTCCATGCTCGCAGGAGAGTTTCAGCTGTGGCTTCGCCTGCGCCAAGCCACTGTCGTGTGGTCGGCATAAATGCATCAAGCCGTGTCACGAGGGCATCTGCCAGCTGCCGGGCGAAGTTTGCAAGCAAAGCTGCACCAAATTGCGTGCAACGTGCGGACACAAATGCTTGGCGCCCTGTCATGAGGGTACTTGCCCCGATACGCCATGCAAGGAAATGGTGGAAGTACAATGCGAGTGCGGCAATCGTAAACAGAACCGTACCTGCCACGAGTTGGCGCGCGAGTACAGTCGCATAGCCACAGCGCAGTTGGCTTCTTCCATGGCCGAAATGCAACGCGGCAACTACATGGAGTTAAGTGAAATACTGGCACCTGTCAAACTCaacaagacaaacaaaacCCTTGACTGCAATGATGAGTGCCGCGTGCTTGAGCGCAATCGTCGTCTTGCCATTGGCCTGCAGATACGCAATCCGGATGCACAACAGCGTCAGGTGACCAAGTACTCGGAGTTTGTACGCACTTTTGCGAAACGTAATCCAACGCTGGTGCAGTCGGTCTACTCCACGCTCACCAATCTCGTCAAGTTGGCCAAAGAGAGCAAGCAGAAGTCGCGCAGTCACTCGTTTCCCATAATGAATCGAGAGAAGCGGCAGCTGGTGCATGAGCTCTgcgaaatatttaatgtgGAGTCTGTTTCGTATGATAAGGAGCCAAATCGGAATGTGGTTGCCACGGCGCAAAAGGATAAGgcctggctgcctgctacCAGCATTATGGAGGTCATACAGCGTGAATCTGGTCAACGTCGTGTCCCTGTGCCCAGCAACAATGCCTGGGGTCTCAAAAAGTAG
Protein Sequence: MWRFGSQAEDNAASTSAATANGGEGVLPDVAMSNHGNGFSTAPPTAAAAAAGVSLAESSFDFDSGGSLGEIAAAAGVAGVANNNYVNFNQFMLQHNIIGNQQANTMQHPFSNDFGMPESTRNGYVNYATSGIASKAPTADLKTPAISTTNNQTFETLFPNPNANVFQYNNNNTFGMQGADTNYEAPAASQTYYNYYAPTFENIGGVNYFGNPFATGFDLCANTQLQVDAPEFVPSFAKLNLNGEHPVEGKSVATNGNETPPADVAKEMKTLPQKPNSTTAETETTRTTASGQAMQATGAMSKQNSRDTPNYEQTEREQRNGDGAAGGGVGNGVNAAAFGNIGMRRGGAGVSAGRRNMDYREEREDRYVDRFDKNREEREDRYVDRFDKKPQRQQRYDNHRSNKRRDDWNRNRDRINGFPVAELDNSNESPLDSPEKKTSPKKNNYVEHEKLSQREKLIRDIETRRLECLVCVESIKSHQSVWSCQNCYHIMHLKCIITWGSASKSDEGWRCPACQNVEKDVPRDYYCFCGKQKNPPCNRQDLAHACGEVCCRIEGCAHACTLLCHPGPCPPCQANVKRSCGCGKTTKTMQCAMKDAIECDAICGKLLNCEQHNCQDKCHEGKCPPCAEKVTQKCHCTKQTREVLCMRETHDKHYYSCGKPCGRDLTCGNHKCKDCCHAGECRACKMSPAIVTSCPCGKLPVLAGARKSCLDAIPTCEGICGKTLRCGKPAHPHQCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCNKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIMPPVACGTKRPVCKRPCSRTHACTHAPQHNCHSAATCPPCMIFTTKWCFGQHEQRKTIPCSQESFSCGFACAKPLSCGRHKCIKPCHEGICQLPGEVCKQSCTKLRATCGHKCLAPCHEGTCPDTPCKEMVEVQCECGNRKQNRTCHELAREYSRIATAQLASSMAEMQRGNYMELSEILAPVKLNKTNKTLDCNDECRVLERNRRLAIGLQIRNPDAQQRQVTKYSEFVRTFAKRNPTLVQSVYSTLTNLVKLAKESKQKSRSHSFPIMNREKRQLVHELCEIFNVESVSYDKEPNRNVVATAQKDKAWLPATSIMEVIQRESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -