Snig017121.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- pnr
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010005379.1:695712-702926[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5 8.5e+03 -3.4 0.2 22 26 230 234 228 236 0.64 2 2 2.1e-16 5e-13 48.5 2.4 1 35 582 615 582 616 0.98
Sequence Information
- Coding Sequence
- atgtgtAATGTAACGACTAAGTTTCATCAGATTTGCCGAATATGTCTTACTTTGGTCGATGAGAGAGAAGTCTCAGCGCTCCAAATTTTCGAGTCTGCTGCGTccttatcaaataaaaatcgaaacaatCAATTTGTTCAGTGtgttaaagataaaaaaaaatgcttaggAAATGAAAATCCGTTGAAAGAACCGGaatgtttttgtaatgctCAGGATGAACACTGTTGCTGTGATAACAACCCATTAACAGTAAAATTCGTTCATGACAGTGAgcttaaaaacaataatcaactTTATGACGGGTTCCTACACAATTCGAACGTGCCTTCTTCCTCTAATACAACTAGCAAGGCTAACCCACACAGCCAAAAATTTGCCCACTCATTTTCAAACACAATCTTTTTTGAGAAACCATCAACTTCTTCAGTATTAAACTTTCAATTACCTACGAAAGCCGAAACCTCTCAACAAACACTTTTTGAGTCTAAAACAACGCCGAGACCACAGCGACAATACGAAGTCGACGATgagaaagctaaaaaaaattttaatcagcGCAGTAACTGTGTAGTAGAGGAACAGCACAATCAAAAGCACTGCGATGAATCATCGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGgcATTACCACATGATGGCTTTCCTAACGTCGTTTGCAGTGACTGTCGAAAAAAGTTAAACTCTTTTTCGAGATTTCGTGCGATGGctcaaaaagcaaacgcaactttaaaaaactttGTGAACTGTACAGAGAACTCAAATATGgATTCTTCTGGAGTTGAATCTaagtttgaaaatattttaaaatcatcaTCTGAAGCAATTGCCGCTAAGGCTTTAACAGAGCTAAGCAAATCATCAAAGAGTGTCATTAAAAGTGAATACAGATATCAGGACATTGTGGGATGTGATACcccacaaaatgaaaaaaagcttcaactaaattttaatgtaattagtTGTTCGTCTTCGTCTAAACTTGAACCTACTCTAATTAATCATCCtataacaaatgaaacttcagATGTCAAACGTAAAGATGCAGAACTTTgtgatttaaatgaaatagaTCAGCAACAATTTTCAGACACACCTTCATTTGTTAGTttagaattgaaaaaaaatgcgGATGTGGAAGAATATAATCATTTACAACAGCAATTAGAAACCGCAGCCGTGCTTATGGATATAAaaaaaaatgatttctttaTTGATTCTGATGCAAGCTCTGATTCAAACCGACTAGAAATGGATGTGTCATCAGTAAATAATGAATGTAAATCACCTGATAGCAGCAGTTCAGATCATGGAACAGATGCTGCAACGACACAATTATGGCAGGCTTTAGCTCGATCAGCTGcaaaatctAGGCAAGAGAACCAAGCGACAGAGCTTTTAAGATGTATGATAAATCAATCTTTTGTATTTCCTGTTTCGTCAAATATTACTTTATCTCCTGAAAAAGTACCTGAAGAGCCAATAGCATTATTGAAGgaTTCACCTCAGAGTCAATCTTCTCAATTAAAACTGTGTCGAAGAAAACAGAGCTACCCAGTAAAAACAGATTCTATAGATGAAGATAAtatcgacaacaaaaaaatgagttGTCATGATGCTATCGGCAACTTAATTCAAGATGTATCTAAGGATAGAGAGggCATGAgcgattttaataatgcaaatctAACGTCTCAAAAAGATATGTCTTGTTCAAATTGTGGAACTCTGACTACAACAATATGGAGACGAAGCATAAGAGGCGAGATGGTTTGTAATGCTTGTGGCTTATACTTTAAGTTGCACGGAGTAAATAGACCCCATTCGATGAGGCGAGATACTATTCACACACGGCGCAGGCGTCCAAAAGAgagtgaaaaatgtaaaaagaaGAATAAACAAGCTACAACTTCATCTGCACCGATTAATAAAATAGTTGATAAGAACGTACGAATGGAATTTAAACACCCAGAGTATTCTACTCCGCCTAACAATGTTATGCACTCGAAACTTAATTTTATGaaattcaaaaaaccGGACATACAAGCGATAACCCTTAAAGAAGCACTTTTACGTCGAAAAAAAAGTCAGATAAAGTCAGCTTTTAATGAACCATGCTTAACAACGGAGGATTTGTCTGTACCTTTAAATCTTGtatcaaacgaaaataatactAAGTTAACATAA
- Protein Sequence
- MCNVTTKFHQICRICLTLVDEREVSALQIFESAASLSNKNRNNQFVQCVKDKKKCLGNENPLKEPECFCNAQDEHCCCDNNPLTVKFVHDSELKNNNQLYDGFLHNSNVPSSSNTTSKANPHSQKFAHSFSNTIFFEKPSTSSVLNFQLPTKAETSQQTLFESKTTPRPQRQYEVDDEKAKKNFNQRSNCVVEEQHNQKHCDESSPHITIQIFNCLSIKALPHDGFPNVVCSDCRKKLNSFSRFRAMAQKANATLKNFVNCTENSNMDSSGVESKFENILKSSSEAIAAKALTELSKSSKSVIKSEYRYQDIVGCDTPQNEKKLQLNFNVISCSSSSKLEPTLINHPITNETSDVKRKDAELCDLNEIDQQQFSDTPSFVSLELKKNADVEEYNHLQQQLETAAVLMDIKKNDFFIDSDASSDSNRLEMDVSSVNNECKSPDSSSSDHGTDAATTQLWQALARSAAKSRQENQATELLRCMINQSFVFPVSSNITLSPEKVPEEPIALLKDSPQSQSSQLKLCRRKQSYPVKTDSIDEDNIDNKKMSCHDAIGNLIQDVSKDREGMSDFNNANLTSQKDMSCSNCGTLTTTIWRRSIRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKESEKCKKKNKQATTSSAPINKIVDKNVRMEFKHPEYSTPPNNVMHSKLNFMKFKKPDIQAITLKEALLRRKKSQIKSAFNEPCLTTEDLSVPLNLVSNENNTKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -