Snig005812.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- Gata4
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010002406.1:103610-112352[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5 1.3e+04 -4.1 1.7 1 5 484 488 484 489 0.83 2 2 3.6e-17 8.6e-14 50.9 7.7 1 34 536 568 536 570 0.97
Sequence Information
- Coding Sequence
- atgGTTTGCGGAAGCATTGCAGCAAGTGTCAAAATGCAACTGAAGATGGAAACACAAACGCcatcacagcagcaacagcagcaacaacaattgcaattgcaacaacaacagcagcagcagcaacaacaaacacagcagcaacaaattttagcaaagcaacatttgcaattgATTGACAAGATCAAAACGGAAACTAATAATGGTGAACAGATACAAGGACAGCCGAGTGGGCTGGAGgagcagcatcaacatcatcatcaacagcagcagcaacaacagcagcagcaacaacaacaacagcagcagcaggcacaagAGCCGCAACAGCAAGtagttgtacaacaacaacaacaacagccaccacCAACGAGTGCCATTATCGTGCAATCGAGTCAGGCCAATCCCACGGTGAATGTAGCAGAGACGCACGAGCTCATACGCCTGGCAAGAACCCGACGTATACTCACCACTGCTGGCACACTtgaatcCAACGATTCACATGAAGCGGAACAATCGGATCCGAACCAACCGGAATACCATCGCCATCATTCGCCGAGTGATTATGTGCAGATGGCGCCACGCAGCGAAGAGCATCAGCCGCCACCGGGTACGACTGTTTATGCCTACATACCCGATAATGGGCAGATCATATGCGCGGAGAATGTTGAAGCTGGTAATATAAAAATCGAGACGATTGAGAAGGATCAAGTGGCAGGTGAAAGTGctgcgcaacagcagcagcagcagcagcagcaacaacaacaacaacaacaacaccaacagcagcaacagcaacagcatcaacagcatttGCAGCAATGTCCGACACCCAATAGTGCCTATGCCGTCGTCGCCAGCGAGGCACTGCAGCATGGCCACAATGCGGCGCACATTGTCACCAATTCGGCGGCGGCACATGTGATGGCGCATGGCGGACCGGGTCTACGCATTGTCAGCGATGATGTGCGATTTAGCGATGGCTCCGCTGGCGCAGCGACCGGAAATCTGTACTACGAAGCCAACATTGTGGATGCGAGCGTGCATGCGAATCCGAATGAATCGAAGACCTATGCGGATCTGGGCAATGCGTACATGAACTTCCCGGCGACGTCATCGTTTGCACCGACCAACAGCTATCCATTGCAGCAGGGCAACACGATCTACAGTGTGCCCGCGCCGACGCAGTTCATAACCAAATCCGATCCGAATTTAGGTGCCCTGCGGCAGCCCTACCAGACGGTGTCCATCTACGACAGCGGCAATCCCAACGAGCAAGCGCTGTGGCCCTCAGCGACGGCGGAGTATCAGAATCTTTCCTTTCCTACGTATCACCCTCAGGTGGTGGAGGAATACACGACCACGAATGTGGCGTCCACACATTGGACCTCCTCGCCGCAGATCACCAGCTACGATGCCACGCTCGGCGTTGCAGCCATACCGGACCTGAAATGTGAGAACTGCAGTTCTCCCTATATACGCAAGGGCAGCGAGTACTACTGCGCGACAGGCTGTGTGGGTGTCGTACGGCCGCCGGGACGTTTGCCGCCGCGTCAGTCGAAGCCGAAGGCAGCCGCTGCTCCCAACAATCGTCGCACAGGCGTCACATGCGCCAACTGCCAGACGAACTCGACGACGCTGTGGCGGCGCAACAACGAGGGCAATCCGGTGTGCAATGCCTGTGGACTGTACTACAAGCTGCACAACATGAACCGGCCGCTCTCGATGAAAAAGGAGGGCATACAGAAACGCAAACGGAAACCAAAGAACAATGGCGGCCCACCGCTGCGACCACTGCCAAGCATGCCGCAAGGAGTCAATATGATGGTCGGCAGTGGTCCGCTATATCCCTCGCAAGTGCCCGTTGGGCTGCCCGCCACGAGCACCGAGCTGCACGACATGAGCACGAATGGACCTGTCGGTGTGGTGCCCACTGCGGGCACACGCATCACGCTGCCGCCGATCACGCACGCGGATCCCAGTGCTGTAGGCACGCTCAATATGTCACGCCATCACGTCACCTCGGAGAGCCACTCGCCCTACAGCAATCCACCGTCGCAGAGTCAATCGCCCCATCTGCCCAACTCGGCTACGCTCAATCGCCAAATTGCTCAATCTGTGCCACCAATTGAGTCTGGTCGCAGCGCCAACGGGGAGATACCCACAAGTGTCATAACGCGCACTGGCCTGCCGGAGCGTTCTTCGAATAATTGA
- Protein Sequence
- MVCGSIAASVKMQLKMETQTPSQQQQQQQQLQLQQQQQQQQQQTQQQQILAKQHLQLIDKIKTETNNGEQIQGQPSGLEEQHQHHHQQQQQQQQQQQQQQQQQAQEPQQQVVVQQQQQQPPPTSAIIVQSSQANPTVNVAETHELIRLARTRRILTTAGTLESNDSHEAEQSDPNQPEYHRHHSPSDYVQMAPRSEEHQPPPGTTVYAYIPDNGQIICAENVEAGNIKIETIEKDQVAGESAAQQQQQQQQQQQQQQQHQQQQQQQHQQHLQQCPTPNSAYAVVASEALQHGHNAAHIVTNSAAAHVMAHGGPGLRIVSDDVRFSDGSAGAATGNLYYEANIVDASVHANPNESKTYADLGNAYMNFPATSSFAPTNSYPLQQGNTIYSVPAPTQFITKSDPNLGALRQPYQTVSIYDSGNPNEQALWPSATAEYQNLSFPTYHPQVVEEYTTTNVASTHWTSSPQITSYDATLGVAAIPDLKCENCSSPYIRKGSEYYCATGCVGVVRPPGRLPPRQSKPKAAAAPNNRRTGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGPPLRPLPSMPQGVNMMVGSGPLYPSQVPVGLPATSTELHDMSTNGPVGVVPTAGTRITLPPITHADPSAVGTLNMSRHHVTSESHSPYSNPPSQSQSPHLPNSATLNRQIAQSVPPIESGRSANGEIPTSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -