Snig005814.2
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- pnr
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010002406.1:135582-143950[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-18 1.8e-14 53.2 3.2 1 34 192 224 192 226 0.97 2 2 1.1e-18 2.7e-15 55.8 6.2 1 35 249 282 249 283 0.98
Sequence Information
- Coding Sequence
- ATGGGTATTCTACTCAGTGATGGCGATTCCACATCGGATCAGCAGTCGACGCGCGACTATCCGttacagcaactgcagcaggaGCTCGCGCTGCAcagcgcaggcagcagcagcagcagcagcgcactcAGTGCCGGTGTGGGCAGCGTCTCGAGTCCAGCCAGCAACGGTTACTACGCAGCGCATACGCGCCACTTCCAGCCGCATCACAATACCAAAATGTACCACACCGGTGGCGGCTATCCCGACCTGAGTGCTGCGGCGGGCGGCGCTGGCGGCGGTGCGGCGGCCTATCATCAGCAGGCGGTCAATACGCCCGTCTACGTGCCCTCGAATCGTGCACTCACGAACAGTCAGTATAATCACGTGGCGGCGCACTTCAGCAGCGCGGCGCAGAATGCCTGGACCACGGACGGCTTTGGCGGGGCGCATGCGCAGCTGCCCGCGCAGTTCTACACGCAAAACGCGGCTGTGATGATGACACCCTGGCGCACGGCCTACGATCCGTCGGGCTTTCAGCGCGCCTCGCCCTACGAGAGCGCCATGGACTTTCAGTTCGGTGAGGGCCGCGAGTGCGTGAACTGCGGCGCCATAAGCACGCCACTCTGGCGGCGCGACGGCACGGGCCACTATCTGTGCAACGCTTGCGGATTGTATCACAAGATGAACGGCATGAATCGGCCGCTGATCAAGCCGAGCAAGCGATTGGTGAGTGCAACGGCCACGCGACGCTTGGGTCTGTGCTGCACGAACTGCGGCACACGCACCACGACGCTGTGGCGGCGCAACAACGAAGGTGAGCCCGTGTGCAATGCCTGCGGCCTGTACTTCAAGCTGCACGGCGTCAATCGGCCGCTGGCCATGCGCAAGGACGGCATACAGACGCGCAAACGCAAACCGAAAAAATCGGGCACGGGCACAGGCGCCGGCACGGGCGCTGGCGGCGGCTCAGGCAGCAGCGCTGGCGGACTCGGCGATGCCGACAAAGATCGCAAGGACGAAGATCTGAAACCTACGCTCGCACTGGACCGCCACAATCTGTCCAGCAGTCTGAGCGCCTCCAACGTGCTCACCGCCAAGCTGCAGAATGAACTGAAGTGCGGCAATCTCGGCTTGAGCGCATCCACATCCGCGTTGCATGGCTCACTCGgccaccatcatcatcatcatcacccgCACtcgcatcatcatcaccataaCGCACACATGACGCAGAGCGGCTCGGCACTCGGCTCCAATGGCACGCGTCTCTCCCTGCACAACCCacacggcagcggcagcggcagcagtggcgCCGGCGGCTTGAGTAATCTGAACAGCGCCGCTGCCACGATAGCCACCTCCACAGCGGCCGCTTCGTCACTGGCCGGCATGAATTCGCAACTGTACACGCCCGCTTTGAACACGAGCCAGAGTGGCCTGCACGCTGCCAGCACGGCGGGCAGCTCCGGCGGCGCTGGCGCAGGCGGTTATGCGCACACCAAGTACGAGCATCTGCTCGCCACGAGTTCGCCCGCGAGCGGCAACACGGCCACGCTCAGCAACGGCACACCCAGCCCCAACTACCATCActcggcggcggctgctgcggcggccGTGCACTTGCATCCGCATCACCATCATGCcgcgcatcatcatcatgccgccgccgctgcggCTGTGGCACACCATGCCGGCATACACGGCAGCGCGTTAAGTCACAATGCGAATcttggcggcggcggcggtggctcAACAGCGGCTGCCTCTGCCGTGGCCGCGGCGTATGGCGTCAAGTCGGAGGTGAATGCCACCAACTATGACTACGTGAACAATTGCTACTTTGGTGCTTCCTTTGGCGCGCTGGGCGGCGGCTCCAGTTCGGTTGGCGCGGGCGTGCATGGCTCAGCCAGCGAACTGGCGGGCTACCATCATCAGCACAACGTCATACACTCGGCCAAGCTGATGGCCACGTCATAA
- Protein Sequence
- MGILLSDGDSTSDQQSTRDYPLQQLQQELALHSAGSSSSSSALSAGVGSVSSPASNGYYAAHTRHFQPHHNTKMYHTGGGYPDLSAAAGGAGGGAAAYHQQAVNTPVYVPSNRALTNSQYNHVAAHFSSAAQNAWTTDGFGGAHAQLPAQFYTQNAAVMMTPWRTAYDPSGFQRASPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSGTGTGAGTGAGGGSGSSAGGLGDADKDRKDEDLKPTLALDRHNLSSSLSASNVLTAKLQNELKCGNLGLSASTSALHGSLGHHHHHHHPHSHHHHHNAHMTQSGSALGSNGTRLSLHNPHGSGSGSSGAGGLSNLNSAAATIATSTAAASSLAGMNSQLYTPALNTSQSGLHAASTAGSSGGAGAGGYAHTKYEHLLATSSPASGNTATLSNGTPSPNYHHSAAAAAAAVHLHPHHHHAAHHHHAAAAAAVAHHAGIHGSALSHNANLGGGGGGSTAAASAVAAAYGVKSEVNATNYDYVNNCYFGASFGALGGGSSSVGAGVHGSASELAGYHHQHNVIHSAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -