Basic Information

Insect: Stegana nigrithorax
Gene Symbol: L
Assembly: GCA_037044495.1
Location: JBAMBQ010003134.1:132634-139212[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.3e-06 0.00043 20.7 1.7 1 23 185 207 185 207 0.98

2 18 0.45 36 5.2 5.8 1 23 213 235 213 235 0.98

3 18 2.3e-07 1.9e-05 25.0 3.1 1 23 241 263 241 263 0.99

4 18 1.1e-05 0.00086 19.7 0.3 1 23 269 291 269 291 0.98

5 18 0.093 7.5 7.3 0.3 2 23 367 390 366 390 0.88

6 18 0.00029 0.023 15.2 0.5 2 23 416 438 415 438 0.96

7 18 0.22 18 6.2 0.9 1 23 541 563 541 563 0.97

8 18 0.0026 0.21 12.2 0.6 2 23 571 592 570 592 0.96

9 18 0.00011 0.009 16.5 0.3 1 23 600 624 600 624 0.94

10 18 1.6 1.3e+02 3.5 0.0 1 19 629 647 629 649 0.94

11 18 0.46 37 5.2 0.2 1 23 659 682 659 682 0.97

12 18 0.0029 0.24 12.1 2.7 1 23 737 759 737 760 0.96

13 18 1.2 96 3.8 7.0 2 23 978 1000 977 1000 0.94

14 18 0.041 3.3 8.4 0.1 1 23 1006 1028 1006 1028 0.92

15 18 0.017 1.3 9.7 0.1 2 23 1036 1057 1035 1057 0.93

16 18 0.48 38 5.1 0.3 2 23 1164 1185 1164 1185 0.94

17 18 0.0061 0.5 11.0 0.0 1 23 1195 1217 1195 1217 0.97

18 18 0.023 1.9 9.2 1.9 1 23 1224 1246 1224 1246 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.3e-06	0.00043	20.7	1.7	1	23	185	207	185	207	0.98
2	18	0.45	36	5.2	5.8	1	23	213	235	213	235	0.98
3	18	2.3e-07	1.9e-05	25.0	3.1	1	23	241	263	241	263	0.99
4	18	1.1e-05	0.00086	19.7	0.3	1	23	269	291	269	291	0.98
5	18	0.093	7.5	7.3	0.3	2	23	367	390	366	390	0.88
6	18	0.00029	0.023	15.2	0.5	2	23	416	438	415	438	0.96
7	18	0.22	18	6.2	0.9	1	23	541	563	541	563	0.97
8	18	0.0026	0.21	12.2	0.6	2	23	571	592	570	592	0.96
9	18	0.00011	0.009	16.5	0.3	1	23	600	624	600	624	0.94
10	18	1.6	1.3e+02	3.5	0.0	1	19	629	647	629	649	0.94
11	18	0.46	37	5.2	0.2	1	23	659	682	659	682	0.97
12	18	0.0029	0.24	12.1	2.7	1	23	737	759	737	760	0.96
13	18	1.2	96	3.8	7.0	2	23	978	1000	977	1000	0.94
14	18	0.041	3.3	8.4	0.1	1	23	1006	1028	1006	1028	0.92
15	18	0.017	1.3	9.7	0.1	2	23	1036	1057	1035	1057	0.93
16	18	0.48	38	5.1	0.3	2	23	1164	1185	1164	1185	0.94
17	18	0.0061	0.5	11.0	0.0	1	23	1195	1217	1195	1217	0.97
18	18	0.023	1.9	9.2	1.9	1	23	1224	1246	1224	1246	0.97

Sequence Information

Coding Sequence: ATGAtggctttaaaaatgttatatcGTGGACCCAGTACGAGACTAGAGAATCTAATTGAGAAAATTCAAGCTACTAAGGAAATTACAAATAACGACATGTACTCCACGCACACCTCCTCCAGCTATTCACCTTCGATATCGGATGGCACGCTGACGCCAAACTcgctgccgccaccgccgccgcagcATGCGCTGCACTTGCCAGCGCCACACGAACAACCGGAGACGACAGCGGAGCGCACGACGCTTAAGGCGAATGGTGAAAATGCGCAGCATATGGCAGACGTGGATGCTGATGCGTTGGCCAAAAAACGTTTGGCACaaagacagcaacagcagcagcagcagccgcagcaacaacaacaacagcagcagcagcagcatcataaccaacatcaacatcatcaccaCCCACAGCCGGCGTTGAAGCTGGCGCATAAAATGCGTAAAATCGAACGAGACGGCAACGCTGCAGCAAACGCGACAACTTCCGTGCACAAGTTTGATAAGTTGACAGGCGACAGCATTAAGAGCTGCAGGCCCGACGGTTCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGTCTCGGCTACTTGAAGAAGCACGAACAGAGCCATGCCGAACATCTGCCATTCAAGTGCGACTACTGCGCACGGCTCTTCAAGCACAAACGCTCCCGCGATCGGCATACCAAACTGCATACGGGGGATCGCCGCTACCGCTGTCCGCACTGTGAGGCGGCATTCTCGCGCAGCGATCATCTCAAGATACACATGAAGACGCACGACAACCAGAAGCCGTTTCAGTGCACGATCTGCAATCGTGGCTACAACACTGCCGCCGCGCTCACCTCGCACATGCAGAACCACAAGAAGCAGGCGGCCATACTCGCCGCTGGCGGCAATCCGCAGGCGCTCAACTACAGTCCACGCTCCACGGGCTCGGCCTCGAGCGGCGGCAGTTTGCACAAGCGACGCTATGCCATGGCCATTGCCTCCGATGGCAGTCCCAGTCCGCGCCTGGAGTATCCGAAGCGTGCGCGCAGCAATCTCGCACAGCacgcagcggcggcggcggcggcggccaTGCAGCTGCGCTGCAGCTACTGCCAGAAGTCGGAGTTCAGCACGCTGGAGCAGCTGAACGCACACGTGCAGGGCATGCACGAGAAGGAGCTGCAGCAGACGCATTTGCTGAACGCTGCCGCGGAGAACGGTGCTGCCGGCGTTGGCTTTCAGCTGAGCTGCGAGTACTGCACCATGAAGTTCGCCAGCATTGCGTCGCTCTTTCAGCATATGCGCAGCACACACATCGATCGTCTGACCAGTCCGAATTCCTACTTTGAGCACTTCAATCGCTTGGCCACCACGGGCACGTTCAGTCCGCGCTTGGCGCTGGCGGccagcatgcagcagcaggccGAGAGCAATGCAGTGGCCGCGTCAGTGGCGGCCATTAAGCTGGAGCAGCAGAGCCTGCCCAGCCCGAAGCCGATCGAGCCGAAGCCCGAGGAGGAACCAACCGATCTGAGCCAGCACAAGCGTCGCTCGGCATCGCCCACGTGCGCTGCGACACCGCATGCGTCGCCGGTGCAGGCGCCCGCGGAGCCGGGTGTGTTCTTCTGCAATCAATGCAATGCCGGGCTGCCGGACTTTGAGCGTTTTCGCAATCATCTGAAGACGCACATTGCTGAGGGTCTGCATCTGGTCTGCCAGCATTGCGGCATGTCGCTGCAGGATCAGACGGAATATGAACGTCATGTCATGTCGCACTTTCTCATTGCCAATGCGGAGTACAACTGCAGCGCCAATTGCAGCAAGTCCTTTGTGAAGCCCGATGAGCTGCAGAAGCATCTGCTCGAGCAGCACGTGATCACCATGTACAAGTGCGCCATCTGTGCGGAGCTCTTCGACACCAAGGTCGCCATGCAGCTGCACTTCGCGTGTGCGCACACGGCCGAGACGAAGCTCTATCGCTGCTCCGCCTGCATGGAGGTCTTTCGTGCCGAGGCCGAGTTTCAGCTGCATGTCAAGACGCGCCATCAGCTGACCAATAAtctgggcagcagcagcaacaacaacaacaacaacagcaacggcattGGCCACGCCTTGGGCCTCAACACGCTGCAGTGCATGTTCTGCCGCGTCGTCTGCGCCTCCGATCTGGAGATGCACTTTCACTTGGCGGCGCATGCGCGCCAGTTCCGCTGTCCCTCATGTCCGGAGACATTCCATGTGGAGTTTCTGCTGGATCGTCATATGCAGAGTCATCATGGCGGCGGTGAGCGTGCCGCCGCGAACAGCGAGAAGGAAGCCTACGAGGAGCACACGAGCACACTCAGCCCCATGAACTCGCTCTACGTGAATGCTCTCTTCGGGGGCAAGCCgccactgctgccgccgctggctgccgccgccgctgcgcAGTcgacgaacaacaacagcagcatcatcgaCTACAATGTGGCCTTTGCCGCCGCACATCTGCAGAAGGGACTCTTCCCCAGCCCCGCCCCGGTGGGCAGCAGCAAGTACTACAATCCACTGCAGGTGGACACCGCTGCCAGCGCCATGAAGCAGCATCCGGCGCTCATGTACGGCCTGAGTCAGCGATACTTCGACACCAATCGCGCGCTCATGGACATGTATgctgcacaacagcaacagcaacagcaacaacaacaacaacagcaacagcagcagcagcagcaacaggagaAAACCTACTTCGTCAGTCCGAAGCCGCAGTCGGTGTCGAATGCGCAGTCGGACAATCGCAGCTCGGGCGCGGAGCTGAGCAATGCCAGCAGTGCGCTGCAGCCCGGCTTCAGCTGCGGCATGTGCGAGCGCAATGACTTTCGCACCGAGGCGGAGGTGCACTCGCATCGCAAGATCGTGCACAACCTGAAGACCGGCGTCAGTCTGCGCTGCGCCTACTGCTGCGGCAACTTCAAGTCGCGCAACGAGCTCGAGCATCACATGAAGACCTGCCACAACTCGACCGGCAAGCACAAGTGTCTCATCTGCGACGAGGTCTTCCCCTCGCCGGCCATACTCGCCGAGCACAAGCTGCAGCACTCCAAGGTCGGCCAGTCGGGCAAGTGTTCGCACTGCGGCAAGCCGCTGCCCGATGTGGCCGCCTTCAAGGCGCATCTGGGcgagcacagcaacaacaacgatgcaCAAATGCCCGTGCAGTGCATCTGCTGCCGCCAGACACTGCACTCCGACTTCGAGATCAGTCTGCATGCCAAATTCCACACCAAGTTCGGCAGCAGTCTGCAGGAGCTGGTCTGCGCGCTCTGCCTCGAACCCTTCGGCCATGTCAGTGCCAATGCAGCGGCGGCGGAGCGTCCGGCCAAGGTCTGCGAGAAATGCTGCCGCAAGCACAGCctgcagcatggcagcaaGCAGCGCAAGAGCAGCACGGAGCACTACGCGGATGCGGCGCGTGCCAGCGCAGAGCTGCAGTACATCGAGAATCGTTGCAATCTCTGCAAGATGATACTGCCGCATGCGGCCAAGCTGCAGGAGCATCTCGTCGAGCACACCTTTGCCGGCACCGAGGATCGTGGCTTCAACTGTTACATCTGCTCGGCGGTCTTCACGGCCGCAGCCGGTCTGCTGAATCACATGAACGAACATGGTCCCAATGCGCGACCCTACGACTGCAATCTGTGCACGGAGAAGTACTACTTTCGCGCCGAGCTGGATCATCATCTGCGCGAGCATGAGCTGCGTCCTAGACAGCCAAGCCTCGCAGCGCCGCCATTGCCCCTGGCGCCACCGGCCTTAGCGTGCAGCAAAGTGGAAGTCAACGCCAAGGAGGCGGAGTCCAGTGCGCTGACCACAGTCAAGCAGGAGCTCTATGAATCGGATGCAGCGCACTCACCTGTGGCTGCTGCGCAGCAGTCTGGCAACGCTGCAGCCGAAGATGATGAATACATTGAGGTGGAGAACGTGCCCGAACTCAGCAGAAACAATGACACGACGACTTCATCGTCGCAAGCCGCAAGCGCTTAG
Protein Sequence: MMALKMLYRGPSTRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTLTPNSLPPPPPQHALHLPAPHEQPETTAERTTLKANGENAQHMADVDADALAKKRLAQRQQQQQQQPQQQQQQQQQQHHNQHQHHHHPQPALKLAHKMRKIERDGNAAANATTSVHKFDKLTGDSIKSCRPDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSTGSASSGGSLHKRRYAMAIASDGSPSPRLEYPKRARSNLAQHAAAAAAAAMQLRCSYCQKSEFSTLEQLNAHVQGMHEKELQQTHLLNAAAENGAAGVGFQLSCEYCTMKFASIASLFQHMRSTHIDRLTSPNSYFEHFNRLATTGTFSPRLALAASMQQQAESNAVAASVAAIKLEQQSLPSPKPIEPKPEEEPTDLSQHKRRSASPTCAATPHASPVQAPAEPGVFFCNQCNAGLPDFERFRNHLKTHIAEGLHLVCQHCGMSLQDQTEYERHVMSHFLIANAEYNCSANCSKSFVKPDELQKHLLEQHVITMYKCAICAELFDTKVAMQLHFACAHTAETKLYRCSACMEVFRAEAEFQLHVKTRHQLTNNLGSSSNNNNNNSNGIGHALGLNTLQCMFCRVVCASDLEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSHHGGGERAAANSEKEAYEEHTSTLSPMNSLYVNALFGGKPPLLPPLAAAAAAQSTNNNSSIIDYNVAFAAAHLQKGLFPSPAPVGSSKYYNPLQVDTAASAMKQHPALMYGLSQRYFDTNRALMDMYAAQQQQQQQQQQQQQQQQQQQQEKTYFVSPKPQSVSNAQSDNRSSGAELSNASSALQPGFSCGMCERNDFRTEAEVHSHRKIVHNLKTGVSLRCAYCCGNFKSRNELEHHMKTCHNSTGKHKCLICDEVFPSPAILAEHKLQHSKVGQSGKCSHCGKPLPDVAAFKAHLGEHSNNNDAQMPVQCICCRQTLHSDFEISLHAKFHTKFGSSLQELVCALCLEPFGHVSANAAAAERPAKVCEKCCRKHSLQHGSKQRKSSTEHYADAARASAELQYIENRCNLCKMILPHAAKLQEHLVEHTFAGTEDRGFNCYICSAVFTAAAGLLNHMNEHGPNARPYDCNLCTEKYYFRAELDHHLREHELRPRQPSLAAPPLPLAPPALACSKVEVNAKEAESSALTTVKQELYESDAAHSPVAAAQQSGNAAAEDDEYIEVENVPELSRNNDTTTSSSQAASA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -