Snig016948.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- CSRNP3
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010005372.1:620566-623985[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1 9.9e+03 -3.7 0.2 73 99 53 79 34 93 0.41 2 4 0.46 4.4e+03 -2.6 0.4 38 38 299 299 243 359 0.56 3 4 0.021 2e+02 1.8 0.1 83 140 402 457 373 462 0.82 4 4 8.1e-94 7.8e-90 300.7 8.6 2 218 480 683 479 683 0.91
Sequence Information
- Coding Sequence
- ATGTTTACACCAATCAAAAAGATTTTCACTTATATACAGAAAAATGCAAGCGGAAGCGGGATGTTTGGTGGTACAAATAGCGCAGTGACTTCAGTCATTGAGGTAGATGATTGTGaggaagcagaaaaaaacataaaaacaaagacagtcagaacaaaaaatactaatcGAGTTGAGATGTCGCAAATGTTAAAAGCGACAACCGAGTTGCATGCAACCGAGACGGTGATTATTGACGATGACATTGAGTTGCAGATCAAACCGAGTATACTcataaataagccaaaaatTGATAAAGAGAAGAGATTCGCAACGCCAACGGCAATACCAACGGCAACACCAATTCCGACAACTTCGCACATACGGGATCGGAACCGATTCGAACACCAATCAAAACAGAGTCATACGGTTATCAGCAAGATCTATAATGTGGAATTGGCAGATGACGAGTTGGCGGATTTTGCCCACGCTCCAATCGAGACACCACCAAATAACATGAAATCGGTTGATTCCGAACAGGTGTCGCGACTGGTTGAGGACGAAGAGGAAGAGTATGTAGGCGCCGATGCGGATGTTGAAGATGATGAAATATACATGGGGGATGATATAGAGAAGACATTCTTGGAGTTAGatgcttttgaaaataaaaacatcatTGTACTGAATGAAGATGCTGAGCACAATGTTTCGATAACATCGGATAACAACTCTGAGGACCCGCTGGCAATCGATGAGTTCTCATTAGCCGAGAATCCACTTGatacatcaacaacaaacctATCAATAGTCATtgaagacgacgacgaggaTAATGATGAGAGTGATGGGACTGCGGCCGTTAGGCGAAGACGCCGCACGAATCTTTGGactgataatgatgatggtGACGAGCAGCATCATACAAGTGCAAAGGATAGCTGCACGCAACAACTTACTAGCCATAGCAGCAGAAAACCTATACAGGAAGAACAAAGAATGCAAACACGTGGCAGCGTCGGTAGTGGCGGTTTACCAAAGACAAACAGTACAGAACAACATGTCGAAACGGTTGATGAACTGCGTAGCGACGGTGGCTCCGATTCAGGGTTAGGCAGTGAAACATCGGCCCTGCTATTGCAATCAACAAATACAAGTCTAACGGAAACAAGTCACctgagcggcagcagcagcgtcataGTGTCACCAAAACCAACTCCACAAACGCTACTGCAGGCCAAGCAGAAAGAAAACCTACAAATGGCGAGCTCAAGTGGCAGCGAATTGGATAACACGCAGAGCCCAAAACCTTTGAAACCTTTGCGTTCGAATCTGAAGCGGCAACTGGTTGAGGTGGACATGGTGGATGCGCTGGACGTAGACGACAGAGAACATGCGAAACTAAGTGTCGCCCCAACggcatcatcagcaacaattaCGCCGGCGGCAACTGCTAAGCGAACCAAGCGTTCGATTAATTTCGACAATGTGCAGGTATACTATTTTCCACGTCAGCAGGGCTTTAATTGCGTGCCTACTGTTGGCGGCTGTACGCTGGGCATGGGAGCGCGCCACATTGGCTTCAAGACGCTGACGCTGGCCGAGCATGCGGCCGAACTGCGACGCGCGCATCGCATGCAAATGCAGGAAGTGCAGCCGCGTGGCGGTTCTTCAAGTGATGAGACCGAGGAGTCGGAAGAAGACTACCTCAGCGATGGCAGTGGCTCAGATCCAGACGGTGAATCGAATGGCTTTCTACAGCCCGTAACGCCAAAGCAACGACGCGCATTGCTCAAGGCAGCTGGAATACGCAAGATCGATGCTAGCGAGAAGATTGAATGTCGAGATATACGCAATTCGCGTGAGGTCTGTGGCTGTTCGTGTCGTGAATTTTGCGATCCAGAGACATGCGCctgcagtcaggcaggcatcAAGTGTCAGGTGGATCGCTCCTTGTTTCCTTGTGGCTGCACACGCGAAGCATGTGGCAATACAGTTGGTCGCGTGGAATTTAATCCAACACGTGTCCGCACACATTTTATACACACAATAATGCGACTAGATTTGGAGCAAcgacaggagcagcagcagcaaacaaataatctTGCTTATGCTCTGACCACGAATAGCAGCCCAAGTACCGGTTACTATGGGCATATGCAACAGCCGCAATCCAACTATAGTTCAGGTTATGCCTCGCCAGCCTATACGCCGGATACAGCAACACCCGCGAACTATTACCAAACGCCACAGCAAGCACAACCGCAGCCGTCATCAGCAGTGACAGCTGCCTACGTTGGCGCTGGCACGTTGACGGATTTGCACACGCCACCGCAATATCAATTGGCCGTCGATAGCCTGGATGCTAATCTCTTTGTTAGCGGTAGTAATGCCACGCCCTCATACGGCGAACTAATACAGCATCCAACCTACCAGAATTTAAGTAACTCACAATTAACCAACTACTACCACCATCTGCACCAGACGCATCATCATCAGTCACCTAATGCGCCCGTCTATCATAGGCAACCCATAACGCCTGCTTTTAGCTCATGCGCTGTGCCATCGGCGCCTCCATTTGGTAATGCTACGACGACTTGTGAAACGACCACCTACCACCCACTAGGAGCTGACAACTCGAATccgaacagcagcaataacaacagcagcagtgctgCAATTGTACAATCCGACACTTTCCTCAACGCAAGCATCGCCAACTGTGCGCCAAGCCTTATCATTACGCctacacaacagcaacagcagacgcAGCAGCTTCGAAGTAAAAACGGCACATGTGCTGGGAGTGAGGATGTTAACAATGCCACACAAGATGTCAATCGTTTCATAAGTCTTAGCTCGCCCAATGCCACTTCCTCGCGTCTTTCACAGATAAATGATCTTCTGCGGCATAATCGTAATACAACAATTGCGCTTGTCGCTGTCTCGGAATCACCACGTAACATTGGTTATGCATTGAATCATAATGGCAGCAACgcaagcaacaatagcaatggTAGCCAAGCAACAGGCAATGCATCCTCAacgacatcagcagcagccaccgcCTCTATAGATACACCACCCATTGAAGATGCGCATAAGCATTATTTGGCATTTGAGCAGTTACCGCCCACGCTTAGCCACCCAGCGCCAATTGTTGGTGTAGTTCACGATGCAACAATAAAGTCTATAGCAAACTCGTCATCGGCAgaagccacagccacagcaacgtCGTCCGCAGCATTGCCGCAACGACCAAACAATATTATTGCCACATTGCCAGCTTCAACAACAATCAGAAGAATAAACTAA
- Protein Sequence
- MFTPIKKIFTYIQKNASGSGMFGGTNSAVTSVIEVDDCEEAEKNIKTKTVRTKNTNRVEMSQMLKATTELHATETVIIDDDIELQIKPSILINKPKIDKEKRFATPTAIPTATPIPTTSHIRDRNRFEHQSKQSHTVISKIYNVELADDELADFAHAPIETPPNNMKSVDSEQVSRLVEDEEEEYVGADADVEDDEIYMGDDIEKTFLELDAFENKNIIVLNEDAEHNVSITSDNNSEDPLAIDEFSLAENPLDTSTTNLSIVIEDDDEDNDESDGTAAVRRRRRTNLWTDNDDGDEQHHTSAKDSCTQQLTSHSSRKPIQEEQRMQTRGSVGSGGLPKTNSTEQHVETVDELRSDGGSDSGLGSETSALLLQSTNTSLTETSHLSGSSSVIVSPKPTPQTLLQAKQKENLQMASSSGSELDNTQSPKPLKPLRSNLKRQLVEVDMVDALDVDDREHAKLSVAPTASSATITPAATAKRTKRSINFDNVQVYYFPRQQGFNCVPTVGGCTLGMGARHIGFKTLTLAEHAAELRRAHRMQMQEVQPRGGSSSDETEESEEDYLSDGSGSDPDGESNGFLQPVTPKQRRALLKAAGIRKIDASEKIECRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRSLFPCGCTREACGNTVGRVEFNPTRVRTHFIHTIMRLDLEQRQEQQQQTNNLAYALTTNSSPSTGYYGHMQQPQSNYSSGYASPAYTPDTATPANYYQTPQQAQPQPSSAVTAAYVGAGTLTDLHTPPQYQLAVDSLDANLFVSGSNATPSYGELIQHPTYQNLSNSQLTNYYHHLHQTHHHQSPNAPVYHRQPITPAFSSCAVPSAPPFGNATTTCETTTYHPLGADNSNPNSSNNNSSSAAIVQSDTFLNASIANCAPSLIITPTQQQQQTQQLRSKNGTCAGSEDVNNATQDVNRFISLSSPNATSSRLSQINDLLRHNRNTTIALVAVSESPRNIGYALNHNGSNASNNSNGSQATGNASSTTSAAATASIDTPPIEDAHKHYLAFEQLPPTLSHPAPIVGVVHDATIKSIANSSSAEATATATSSAALPQRPNNIIATLPASTTIRRIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -