Snig017013.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- F54F2.9
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010005377.1:11661-13505[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4 5.2e+03 -2.2 0.1 3 12 21 30 20 40 0.63 2 3 3.9e-07 0.0005 20.2 0.0 4 38 303 340 300 341 0.88 3 3 1.5e-09 1.9e-06 28.0 0.4 3 43 392 437 390 439 0.91
Sequence Information
- Coding Sequence
- ATGAAGCTGTGTTGGATTCGTATTGTTTTGCTGCTAAGCATCTGCGCATTGGGTACAAATGCCTGGGGTTCAGAAGAGCTggaaatttttgatttagtcgAGGAGATCAACAAGaacttttatgaatttatggGAATTGGACagaATGCGACAAACACCGAAATAAAAAGAGCATTTCGCACGCTTTCTATTGTTTTGCATCCTGATAAGAATCCATCAGAGGATGCGAATATACAGTTCCGCAATTTAGTTTCAATCTATGAAGTGCTCAAAGATCCCAACCGGCGTGAGAAATACGACCGAGTACTGCGGGATGGTCTCCCCAACTGGAAGTCAGCATTGTATTACTATCGTCGTATGCGCAAGATTGGTCTGTACGAAGGTGCACTCATTCTTTTCATAATCATAACAATTGGACAGTATTTATTCGCGTGGGCGGCATACCTGGAAAAGAAGTACACAGCAGAACAAGTTTTTGGTACCAAGCTAAAAAAGTtgcagaagaaaaacaaaaacatcgaCATGGAGACAATACTTAAAGAGATACCAATACCGTCTATACTTAATACGCTGCCCTTTCAAATACCACTTGCCATATTGCATTTACCAAAGTCTATTATGAATGCGTTCAGCAAAGCGAATGAGCTTAAGGATATTGCCTTGGAAAAACGCAGACAaGAACTTGAGGCGGCCAAACGTCAAGAGGATCTGGAGAGGGAAGCTGAAGAACAGCTGCGCTtacgcaaagaaaacaaagagaatCTCCGTAAACGTAagcaaaatagcaaagcacCCGAGAAAACGGAAGAAGAACTGCGCGGTTATTCGCAAATACATGCCAGAGAAATAACAGATGATGATGCCGTGAAACCTGTAACCCAAAAGAATTCGGTGAGTGGTGGCTTCTGGACCGACGAGGATCTTGGTGAACTTATACGTTTAGTGAAAAAGTATCCGGGTGGTTCGAGTAGTCGTTGGAGTACAATTGCTGAGTTCATGAATCGCAGCGTACAAGAGGTCACTTTTATGGCAgctaaaatgaaagaaaacggCTACCGCATACCCGGGCAGGCCGAAAGCGTTGCCGAGAGTATTGTACAGGAAACACAACAATCAGTGCGCAAGGAAAAAGTCAAAAAGGTTGCTGAGAAGAGTATGCTCATACCAGAAACTAATTGGACACAGGAGCAACAACGTGCGCTCGAATCGGCAATAGTCAAATATCGCAAGAATGCTAGTGGCGATCGTTGGCAAAAGATTGCCAACTGCGTGCCAGAGAAAACGAAAGAGGAGTGTTTGGTGCGCTACAAGTACTTATGCGAGCTAGTGAAATCGCAAAAAAGAGCCGAGGAGGAGGGGGTTGGTGAGTCAGTTGCTCAGGATGGTGCAGCGGCACCTGCTGTTGAAGCATCAATAGCGGTAGAACCGGTTGAAGATACTAGCAACTATGATGCGGATTTCTCCACAGAGCCCGAAACATCAAGTGAAAAAAAGCTTAGTAAACGCGAGCGTCGGCGCCGCAAGCGTGATTTGTCCAGTGGCGAAGACTCGGACGACGCTTATCAATATGAGATGAGTTAA
- Protein Sequence
- MKLCWIRIVLLLSICALGTNAWGSEELEIFDLVEEINKNFYEFMGIGQNATNTEIKRAFRTLSIVLHPDKNPSEDANIQFRNLVSIYEVLKDPNRREKYDRVLRDGLPNWKSALYYYRRMRKIGLYEGALILFIIITIGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMETILKEIPIPSILNTLPFQIPLAILHLPKSIMNAFSKANELKDIALEKRRQELEAAKRQEDLEREAEEQLRLRKENKENLRKRKQNSKAPEKTEEELRGYSQIHAREITDDDAVKPVTQKNSVSGGFWTDEDLGELIRLVKKYPGGSSSRWSTIAEFMNRSVQEVTFMAAKMKENGYRIPGQAESVAESIVQETQQSVRKEKVKKVAEKSMLIPETNWTQEQQRALESAIVKYRKNASGDRWQKIANCVPEKTKEECLVRYKYLCELVKSQKRAEEEGVGESVAQDGAAAPAVEASIAVEPVEDTSNYDADFSTEPETSSEKKLSKRERRRRKRDLSSGEDSDDAYQYEMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -