Snig000217.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- RCOR3
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010000159.1:108516-109721[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6 7.2e+03 -2.7 0.0 25 37 62 76 61 77 0.85 2 3 4.5e-11 5.8e-08 32.8 0.1 3 45 141 183 139 184 0.96 3 3 3.5e-08 4.5e-05 23.6 0.0 2 43 312 353 311 356 0.93
Sequence Information
- Coding Sequence
- atggaaGGTGAAGATCTGAAAGAGAGAGTTGCGTCCAAAGTGTATGAAATGAATACCTATGATGAAAGAAGCCACACAACTTTGTCTCTAAAGGACTTCGAGTACAATGTGCGTAAGTTGCGCTCCAAGAGCAAACCTTTACCTTACTTGGATACAACCAATATAGGTGCGAATTACCAAGCCGAGATACCGGAATTCATACCACCTGAAAGGCGCACAATTAATGATCTAGGCGATTGTGAAGAACTTATATGGGCGCCAGTAGAAAATATGTGTGAAGACGATATGTCGATGTATTTGGAAGCAGCTATGCAGATTTatgattttagttttgaaCAGGCGTTGGGTTTTCTTAATTACCATAAAGATAATGTGTCAAATGCTCTAAACGACTTGGAAAACTATGAGACCGGTCAGCGCAAATGGACGGAGCGTGAGAAGGAATGGTTTGAATTGGGCTTTGCAACTTATGGCAAAAAATTCGAACTAATTAAAAAGATGCTGCCTGGACGTAGTGTGGGCGACGTACTGCAGTATTactacaatattaaaaaagcacCAAAGGTGGCAACGAGTTTCTTTGATAATCAGGCTGCCTTTATAAAAAAGGAATCCATTAAAGAAAGGTCGGCGAGTAAAGATGATTTTCCCACGACTTCTGCCGCGATACATTTGAGACCGTCGCAAACTTATTTACAGCCTagaacaaaacagaaattgtCTCCGGATGGCTTACCGCTTTCAAATGAACAACTTTATGAGTTAGTCAAGGTGAATAAATGCATCAGTGACAATGAGCGTGAGATGGGTTTGCTTTCATCTGAGATTTCTAAGAATAATTTCTTGATTGTGGATATGTTAAAAGAACATGAGTGCGATATGACCTTAGTGGCCGCTTCGTCTATCGGCGAAGCGAAAGAGATAAAATCCACGGAACGTTGGTCTGGCGACGAGTTgtcaattttggattttgcGTTGCGCGATCATGGCAAGAATTTTGAAGCGGTGGCTGCAATAATTGGTAGCAAAACGTCCAAACAGGTGCGCAATTATTGCGAGGAGCATGCAGTAAAATATGGAGGTAACGTTTGTGTTGAAGCAGTTGAATCGGTTGTTTTTGTAGAAGATGATTACTTGAAGGATGACGACGAAATACccctaaaaaaaaagctgaagaAAACTGATGCCACTAAACATAAGTTATAA
- Protein Sequence
- MEGEDLKERVASKVYEMNTYDERSHTTLSLKDFEYNVRKLRSKSKPLPYLDTTNIGANYQAEIPEFIPPERRTINDLGDCEELIWAPVENMCEDDMSMYLEAAMQIYDFSFEQALGFLNYHKDNVSNALNDLENYETGQRKWTEREKEWFELGFATYGKKFELIKKMLPGRSVGDVLQYYYNIKKAPKVATSFFDNQAAFIKKESIKERSASKDDFPTTSAAIHLRPSQTYLQPRTKQKLSPDGLPLSNEQLYELVKVNKCISDNEREMGLLSSEISKNNFLIVDMLKEHECDMTLVAASSIGEAKEIKSTERWSGDELSILDFALRDHGKNFEAVAAIIGSKTSKQVRNYCEEHAVKYGGNVCVEAVESVVFVEDDYLKDDDEIPLKKKLKKTDATKHKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -