Snig012000.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- basR
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010004461.1:178053-180367[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.6 3.4e+03 -1.6 0.0 12 46 179 220 177 220 0.67 2 5 3.1e-12 4e-09 36.5 0.0 1 44 226 270 226 272 0.93 3 5 2.9e-06 0.0038 17.4 0.0 1 42 280 325 280 329 0.87 4 5 1.8e-07 0.00024 21.3 0.0 2 45 336 380 335 381 0.86 5 5 1.2e-08 1.6e-05 25.0 0.0 4 44 390 431 390 433 0.94
Sequence Information
- Coding Sequence
- ATGGCGGATATGTCGTTTTTCGCTGAAGTAAAATCAAGTTTGGACGAAATACCGCGTTTACTTGCTACTCATGAATCTGCCAACTATGAGAATGCGCTTGTGCTTAATCAGGCTTTACAGAAACGTCTGCAGCAAGTGTTTCAAAACTTACAGTCTCTGCTGCAgacaatacataaaaaatatgcagatAATAAGCGCATAATGGACTCACGCCTTAGACGGCAAACCGGCATCGGGCGGAATAGCGCTTTATTGCGCGGCggaactttttattttaagggCAATATGTTCTTCAGAGATTCTCGTGGTCGTGGATGTCCTAACACACCGGACTATGATCAACGTTGTCAGATGGGTGAAATGTTTCCAATGGATTTTAATTTACGCGCGCGCCACATTTGGACAATAAAAGATAAGTCGAGCATTATTAGTGGCATTAAAGCGCAGATACTTGAACATTTCGAAGTGTTTAAGAATAGTAAGATGCACGCTACGAAGATGGAAGTGGCTGTGCATGGACAAAAGCTAGCAAACCTGTTAAAACTCGTGGATGAACATGATGGCTTTGACTTTAAAATCGATTGGGTGCAAATATCGGCAATCGATCTCGGCTATCGGCATGCTCCGAGCAGCTGTGAAGCCATGTGGAATGTGTACCTACATCCAAATTTAAATCGCGATGCGTGGACTGCAGCAGAAGAGGAATCCCTTATAGATGCCGCACGAGAGTACAATTTTCAAGATTGGTCCAgtattgcagcagcagtgggCAAACGTTCGGATTACCAGTGTTTCATATATTTCAAGACGAAACTAGCCTCTATGTTTACAATgtcgaaaacaaaatggacTCAGTCAGATGATGAGCACTTGCTTGATATAGTCAACAAGTGTACAGTTAACGCCGTTATCAATTGGACAGAAGTTATGCTGCATTTCCCAGACCGGGCCAAATCAAGTGTTATTTGCCGTTACTTTTATTCACTAAATCCTCGTATAAGTCATGATCCATTCACGCCTGAGGAGGATTTGCTTCTGCTAGCTGCTGTCGAAGAATataatggaaaattttattgctttccgCGAACATTGTTTCCCAATCGAACGCTTTGCCAATTACGTTCTCGTTATCACAGTACATTGACGCAACGGGACAAGATAGACTTCTGGTCTATTATAGATGACGAGCGCTTGATGAAGTTTGTCGCTGAGAATGGTGTGTCCTCTTGGCAATTATGCGCTCAACAGTTGGGCAACCACACACGCACCAGTTGTCGCACCCGTTTTCTGACAATAAACCGATTTTTCACAAAGAATCCACAAAGCAAACTTGAAGATATACCGCGACGTCGCACACGAAAGTCACGTAACGGCATAACAGTCGgaaactggacagaaaaatTGCAAGACTTAAACAAGCCACAAACGCCAGCACCAATAGCTGGTGCCAAGCGAAAACGACAACgctcaaaacaaaacgaggACCGCCCTGAGTCAAATGTTGTAGCTAAGCAACAACGGCCGTATCGGCAAACTTTGCGTACCGTGCGTTTGcaatattacaatttttttaaatatgcatataatttgcGCTTAGATGAAAATGTGCCCACAGCGTTGCCATCCTCCGACTATGCGCTGCGTATAGCCGTTGGCGCactaaaatatgcacaatttaAAGCAGACAACTGTGCCAGcccaaacacaaatcaaatgtGGTCTGCTTCCTTGCCAATAGAAGTGAGTGACGATTATGCGCAGCTACTGGAAAATGTTTCACTAGAGACAATTGTGCCGGAGAAATACGAATTACCGCCAAATTGGGCGACAGCTGTATGTTTACGTGCGGTATGCATACAAGTCGCACAGTTGGATTTCATACCAGAAAAGTTGGAATTCCCTGAAGAAGCAATGCATGAGGCGCTTCTCCTATTTCGTCAACGACTGCGTACATTGCTGCATAAGACAATAATATTGAGTCGCTTGCAACCAAGTAATGTATGTGGACTACGCGAGGCCATGGAAGCGGCAACATTTCCGACTGATTGGAAGGCCGTAGAATTACCTGCCGTGGTTAACTTAAACGCGGCTTTAAGTATTGATCCTTTGAATAATGATTTTGACATGGGTCCATGCGAGTctgaaacaacaaatattaaatcgGAGTTTCAGTCAAGTCCAAAGCGGCTGCAGTAG
- Protein Sequence
- MADMSFFAEVKSSLDEIPRLLATHESANYENALVLNQALQKRLQQVFQNLQSLLQTIHKKYADNKRIMDSRLRRQTGIGRNSALLRGGTFYFKGNMFFRDSRGRGCPNTPDYDQRCQMGEMFPMDFNLRARHIWTIKDKSSIISGIKAQILEHFEVFKNSKMHATKMEVAVHGQKLANLLKLVDEHDGFDFKIDWVQISAIDLGYRHAPSSCEAMWNVYLHPNLNRDAWTAAEEESLIDAAREYNFQDWSSIAAAVGKRSDYQCFIYFKTKLASMFTMSKTKWTQSDDEHLLDIVNKCTVNAVINWTEVMLHFPDRAKSSVICRYFYSLNPRISHDPFTPEEDLLLLAAVEEYNGKFYCFPRTLFPNRTLCQLRSRYHSTLTQRDKIDFWSIIDDERLMKFVAENGVSSWQLCAQQLGNHTRTSCRTRFLTINRFFTKNPQSKLEDIPRRRTRKSRNGITVGNWTEKLQDLNKPQTPAPIAGAKRKRQRSKQNEDRPESNVVAKQQRPYRQTLRTVRLQYYNFFKYAYNLRLDENVPTALPSSDYALRIAVGALKYAQFKADNCASPNTNQMWSASLPIEVSDDYAQLLENVSLETIVPEKYELPPNWATAVCLRAVCIQVAQLDFIPEKLEFPEEAMHEALLLFRQRLRTLLHKTIILSRLQPSNVCGLREAMEAATFPTDWKAVELPAVVNLNAALSIDPLNNDFDMGPCESETTNIKSEFQSSPKRLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -