Snig011472.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010004257.1:35766-40370[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-10 1.2e-06 28.2 0.0 2 40 29 67 28 71 0.90 2 2 2.3e-18 4e-15 55.3 0.0 1 43 543 586 543 588 0.95
Sequence Information
- Coding Sequence
- ATGCATACTCAAGCACTCAAGTCATCGCTCATGACACAATCCGCGTGTGCCACGCCCATACCCGCAGAGCGGCTTGCCCACAATGAGGAAGAACTCAACTGCGCGGTCTTGGACGTGCAGCAGGGCAAGATGAGCATATACAGGGCGGCCAAGCTCTACAATCTGACGGAATCGACGCTGCGCAACAAATTGGAGGAAATCGAGCGACGCATGAGCAATGACATCCTCCCATCGGGCGATGACgccgacgacgatgacgacaacagcaacgcatcCACACCACAGCTAGCTGAGGCGCCGCCAGCCTACGACGAACTCAGCAGCCGCTTAGCCGCCTCGACTGCGCAGCTGCGCAAACTCTgcgctgccaacaacaatggcagcgaaCTGGGTGACGAGACGGATGCTCTGCTGGTCAGCGGCTCGCCAAAGCTGGCCAATTCGCTGCGCACAACGCCCACAACAACGCCCGGCGTGGGGCAGCTGCCGGCGCAGACATCGCCGCAGCCGCAGGTGCAGCCCATGTGGATCGACACGAATATGCTGCTGCAGACCCTGCTGCTGACGGCAGGCGTGCTGCAGCCGGCGAAACTCGACGAAACGCTCACCGTACGCGATCTGCTGAATGCTCTGCTACTGAACAGCGGCAACGCCTTCATGAGCGACCTGGCGAATGCGCCGGCAGCGGCCgccattgcagcagcagcagcagcgtcgctGAACGTGGCCGGTGCGGGCGCTGGCGTGGCTGCTGCCGAGAATGCGCTCAACAATGGTAAACCAAATATGCACGAGCAGCGCTTATtgctgcagcaattgcagcagcagcagcagcagcatcatcagcaccATCAGACGCAGCAGGCGAGCGCAGCCTATAGACATCGGCTGCCGAAGTCGGATACGCCGGAGACCACATCGTCGCTGGACACAAGTGAGACCTGCGACGATCCGGCTGGCATACTGAAGATTCCGTCCTTTAAGCCCGTCGCTGGTGCTGCGAGTACGTCGCCGTCGTTGCtctgcaacaataacaacaacaacaacagcatcagcagcagccagctgagcaacaacaatctaAGCAACCCGAATGCCAATCGCAACGGCGACAGTCCGCACTCGGCCTCGCCCATGCTGGCCGCCGCTGTGGCCGCTGCCAATGCGAACAGCGTCTATCGccagcacaacagcagcagcagcagcaacaacaacagcaatcatcTGCTCAGCGCATCGCCGCCCTCGTTCCGCGAAGTCATGACCAACAGCATACAGCGCACGATCAACGAGCAAGCGACCAAGGACgcacaggcagcagccgcagcagcagcagccgccggtGCTGGCCTTGGCGTCGGTGTTGACTACAAGAAGCCCAGCATCTCGGTGGTGAAGAGAATCGGCGGCACGGACACCACGCGCATCGGTGCATCGCCCAATCTGCTGTCGGCACAGCACGAGTCGCAAGCCGCACACCTGCCACATCATcacgcgcatgcgcatgcgctcACGCATCCACATGCGGCGCACGCGCACGCACATCATCTGAGCCGGCAGCAGGAGGCGGCCGCACTGGCGGCCGGCAAGGGCACACGGCCGAAGCGCGGCAAGTATCGCAACTACGACCGTGACAGTCTCGTGGAGGCCGTCAAGGCGGTGCAACGTGGCGAAATGTCGGTGCATCGTGCGGGCAGCTACTTCGGCGTGCCGCACTCGACGCTCGAGTACAAGGTGAAGGAGCGGCACCTGATGCGGCCGCGTAAGCGCGAACCAAAGCCTCAGCCGGGCCTGGACGgcctcagcagcagcggcagcggttCGAGCAAAAACTCAAACATTCCAGGATTCAACAACCTCGACAAACTGAAAGCCAGCAACTCGAAGCTGAGCAATGCGCTCAAGAACAACGCGCACGCGGCCTCGGCAGCAGcggccgccgcagcagcagccgccacaaGCTCGGCCGCGGGGGCGCCCAATGGCATGAAGCTGCCCATGTTCGATGCGGCGTCGCAGCTGCCGTATCAGGCATCGCCCATGGCATTCTGGCAGTCACCGGCGAATGCGGCCAGCTTCGCGCTCGACTTCAATCGGGCCGCGCAAGGGGCCGCCGTCAATCCGGAATTCCTCAAGACACACCTGCAGGAGGCCATGCGCCTGAATGCGGCCGCCGCGGCGGCGGCCAATGCCAACAGCACAAGTCCGCTGGGCGGCAGCAGCGCGGCCGGCCACAATCATGGCGGCATGAAGAGCGCACTCGAATTCGCGGAGAACATGTACGATGGCATCATACGCAAGACGCTCGACCGCAAGAGCAACGATGTGGGGCCGCCGCTGGGCGCTGCCGGCAATGGCGGCAGCGccagtggcagcagcggcggcgcgCTGCTCGATCAGCTGCTGATAAAGAAGTCACCGCTGCCGTTCACAAACAACCGCAATAATGACTATGTGGCCGCTGCCTGCACGTCGGCGTACAAGCGTGGCGGCAGTCCGTTGAGCTTTGCGGACACGATAAAACGCGAACGCGCCAGTCCGGAGCGCGGCAGTGCGAGTAGTGCGGGCAGTGATGACGATGAGGAGGACAGcctgaacaacaacagcaatgccatGCATGATGATGTGCTGCTtgagcataacaacaacaacagcagcaacaagtgcaacaacaatggcggtttgctgcaacagcaacaacaacaacagcagctacagcagcaactgcagcagcagcagcgtaacAGTCGGATCACGTCGCGCGACTCGGATGCCACCGATGCGAGCAGCATTAAAAGtgaacagcacaacaacaacagcaatgccagcaaaatCATGGATCTCAATGGCGGTGTCAAAATGTCAACGACGCCGCCCCCGCCGCCGTCACATTTGCTGTCGGCCGACAGCAATCACGTCAACTCGATACTGCATGAGAAATTGGCACAAATCAAGGCCGAGAAGCTGGAACACGAGGAGGCGAATTTATAG
- Protein Sequence
- MHTQALKSSLMTQSACATPIPAERLAHNEEELNCAVLDVQQGKMSIYRAAKLYNLTESTLRNKLEEIERRMSNDILPSGDDADDDDDNSNASTPQLAEAPPAYDELSSRLAASTAQLRKLCAANNNGSELGDETDALLVSGSPKLANSLRTTPTTTPGVGQLPAQTSPQPQVQPMWIDTNMLLQTLLLTAGVLQPAKLDETLTVRDLLNALLLNSGNAFMSDLANAPAAAAIAAAAAASLNVAGAGAGVAAAENALNNGKPNMHEQRLLLQQLQQQQQQHHQHHQTQQASAAYRHRLPKSDTPETTSSLDTSETCDDPAGILKIPSFKPVAGAASTSPSLLCNNNNNNNSISSSQLSNNNLSNPNANRNGDSPHSASPMLAAAVAAANANSVYRQHNSSSSSNNNSNHLLSASPPSFREVMTNSIQRTINEQATKDAQAAAAAAAAAGAGLGVGVDYKKPSISVVKRIGGTDTTRIGASPNLLSAQHESQAAHLPHHHAHAHALTHPHAAHAHAHHLSRQQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYFGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGLSSSGSGSSKNSNIPGFNNLDKLKASNSKLSNALKNNAHAASAAAAAAAAAATSSAAGAPNGMKLPMFDAASQLPYQASPMAFWQSPANAASFALDFNRAAQGAAVNPEFLKTHLQEAMRLNAAAAAAANANSTSPLGGSSAAGHNHGGMKSALEFAENMYDGIIRKTLDRKSNDVGPPLGAAGNGGSASGSSGGALLDQLLIKKSPLPFTNNRNNDYVAAACTSAYKRGGSPLSFADTIKRERASPERGSASSAGSDDDEEDSLNNNSNAMHDDVLLEHNNNNSSNKCNNNGGLLQQQQQQQQLQQQLQQQQRNSRITSRDSDATDASSIKSEQHNNNSNASKIMDLNGGVKMSTTPPPPPSHLLSADSNHVNSILHEKLAQIKAEKLEHEEANL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -