Snig011925.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- kn
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010004427.1:34854-43230[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-52 2.2e-48 165.0 0.0 10 134 19 131 10 134 0.93
Sequence Information
- Coding Sequence
- ATGTTTGGTCTGCCACCCACGGCTGCCGATATGAATCAGCCACGCGGGCCAATGACTTCGCTCAAAGAGGAGCCACTGGGGGCACGTGCCTGGATGCAACCGGTAGTCGATCAGACCAATCTGGGCATCGGTCGCGCTCACTTCGAAAAGCAACCGCCGAGCAATCTACGCAAGTCCAACTTCTTTCACTTTGTTATTGCGCTATACGATCGTGCTGGTCAGCCAATTGAAATTGAACGTACCgcttttattggttttatcGAAAAGGATTCGGAATCGGATGCAACAAAGACGAATAACGGCATACAGTATAGATTACAATTGCTCTACGCGAATGGAGCGCGCCAAGAGCAGGACATTTTTGTACGTCTAATTGATTCAGTGACAAAACAGCGTAAACCAGAACCAAATAGCCCCTTGAAGCAGATATATGCACATCTGCATCTGTAA
- Protein Sequence
- MFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQRKPEPNSPLKQIYAHLHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00062532;
- 90% Identity
- iTF_01259012; iTF_01398216; iTF_01114799; iTF_00062532; iTF_00921888; iTF_00061713;
- 80% Identity
- -