Snig011924.4
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- kn
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010004427.1:12980-15182[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-119 8e-116 387.7 0.0 205 385 1 210 1 212 0.99 2 2 1.8e-07 0.00068 18.1 14.2 422 516 213 307 210 322 0.60
Sequence Information
- Coding Sequence
- ATGCGAAGGTTTCAGGTTGTAATATCTACACAAGTGACTGTCGACGGCCCATTATTAGCAATATCGGATAACATGTTCGTCCACAATAACTCCAAGCATGGACGACGCGCCAAACGTTTGGATACCACGGAAGGTACAGGCAACTCCTCCCTGTCCATAACCGGTCACCCCCTCGCGCCTGACAGTACCTATGATGGTCTCTATCCACCATTACCTGTGGCAACCCCCTGTATCAAGGCAATCTCACCTAGCGAAGGTTGGACGACAGGCGGAGCCACCGTAATCATTGTCGGCGACAATTTTTTTGATGGATTACAAGTCGTCTTCGGCACAATGCTCGTCTGGAGCGAACTGATCACATCACATGCGATTCGAGTGCAAACACCACCGCGCCACATACCTGGTGTCGTAGAGGTGACGCTATcctacaaaagcaaacagtttTGCAAGGGTTCACCAGGTCGCTTTGTCTACGTCTCAGCACTCAATGAGCCAACCATCGATTACGGATTTCAACGATTACAAAAGCTTATACCACGTCATCCAGGAGATCCGGAGAAActtcaaaaagaaataattttaaagcgTGCTGCGGATTTGGTTGAGGCGCTATACTCAATGCCGCGGTCACCCGGAGGTTCAACTGGCTTTAATTCATATGCTGGCCAATTGGCTGTGAGCGTACAGGATGCGGGCACTGGACAATGGACCGAAGATGACTACCAACGCGCCCAATCAAGCAGCGTCAGTCCTCGTGGTGGCTATTGTAGCAGCGCCTCGACACCACACAGTTCGGGTGGATCGTATGGTACCACCGCATCTACCGCAGCCGTGGCAGCAACTGCCAATGGTTACGCGCCTACACCCAATATGGGTACGCTCTCCTCTTCACCGGGCAGCGTGTTTAACTCCACTTCAATGTCGTCAACGTGGCATCAGGCTCTAGTGCAACATCATCATGCTGCACACCCGCACCACTACCCGCACCCACATCAACCGTGGCATAATCCAGCAGTCTCCGCAACTGCAGCGGTTTAA
- Protein Sequence
- MRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDAGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTTASTAAVAATANGYAPTPNMGTLSSSPGSVFNSTSMSSTWHQALVQHHHAAHPHHYPHPHQPWHNPAVSATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600097;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_01363680;