Snig013726.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- grh
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010004841.1:17106-40536[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.67 6.5e+03 -3.8 0.3 89 116 96 108 84 138 0.45 2 2 2.1e-63 2e-59 200.6 0.3 24 221 409 601 395 603 0.94
Sequence Information
- Coding Sequence
- ATGTGCGTCGGTACGTATTTGTTGTCTTGCAAGTTTCTGCCGTTCAATAGCAGTGATACGAGCACATCGACGAACAACAGCAAGCTAAACGGACAGACCACACCTATCGATGTATCTAGCCTAtcgcaaaatgaaattcaaggCTTTCTACTCGGTGCACACCCATCATCgtcaacggcagcaacaacaacggcggtCTCGACGACAATTTCGCAGCCAACGTCCATAATACATCCAGCAGGTGTCAGTGGGGTGGCCAATGCAACTGTTGTGGTAACTgccgaacagcagcagcagcagcagcaacagcagattATAAGCATCAAACGAGAGCCAGAAGACTTACGAAAGGATCCTAAGAATGGCGcgaataataacaataataacaacaataataataacaacgcaAGTGGCCATGGTCAGAAGGTTTTAGTCGTGGACTCAACACCAACATtagaaactaaaactaaaaagtcaACTAGTCCAGCAAGTACATCCAGTGAAAACATGTATGCTACTACCGGCGGCACACAGATTTACCTTCAGACCTCACATACCTCGAATGCAAACGGTACGGGCCAAGCAAATCTCAGTGCACAATCGCCGAGTCCGGGTCCGTACATAAATCCGGATAGCTATGGCATGTACACAAATCGTTTACCTCCGGGACCGCCGACTGCGTTCATTGCGGAACCCTACTATAGAGAATATTTTACACCCGATGGCCAGGGTGGTTATGTTGCCACACGTTCCATGTACGGTGACAATGAAGCGCCCCAAAATCAGACAAATGCCACATACGAGAATCGCTTTGCCAACAGCACGAACACAACAAGTGCGACGgcaccgccgccaccgccgcccaTCAAGAGTGGCACGCCGATCTATGCCAAGGCCATTACAGCCGCCGGTCTGACCGTTGACCTGCCAAGTCCCGACTCGGGCATTGGCACCGATGCGATAACACCGCGGGATCAGAACAGCATACCCCAGTCTTTCGATTATACAGAATTGTGCCAAGCCAGCGCCGGCGCATTGATCGATGGCAATGGCACCATACCCTTGCCGGTGAACAATATACAACGTGCTACAGTGACCATACACGGTGGCCAGAACAGTCCAACCACCTCCTTGGTCGACACAAGTACCAATGGCTCCACAAGATCGCGACCTTGGCATGATTTCGGCCGTCAAAACGATGcagacaaaatacaaataccaaaaatTTTCACAAATGTTGGTTTCAAATATCATCTCGAGAGTCCGATAAGCTCGTCCCAACGGCGCGAGGACGATCGAATCACATACATCAACAAGGGACAGTTCTATGGCATCACTTTGGAGTATGTGCCCGATGCGGACAAACcaatcaaaaatacaacagtAAAGagTGTGATTATGTTAATGTTTCGTGAGGAGAAGAGCCCCGAAGATGAAATCAAAGCTTGGCAATTCTGGCATAGTCGTCAGCATTCCGTTAAGCAAAGGATACTCGATGCGGACACCAAAAACTCGGTTGGTCTTGTTGGTTGCATCGAAGAAGTCTCACACAACGCGATTGCAGTCTATTGGAATCCACTTGAGAGTTCCGCCAAGATAAATATTGCCGTACAATGCTTGAGCACCGATTTTAGCAGCCAAAAGGGTGTCAAGGGCCTACCACTGCACGTACAGATCGACACGTTCGAGGATCCCCGAGATGCAACGGTATTCCATCGGGGCTACTGTCAGATAAAGGTTTTCTGCGATAAGGGTGCTGAACGCAAGACACGCGACGAAGAACGACGCGCGGCTAAACGCAAAATGACAGCCACAGGTCGTAAGAAACTTGATGAGCTCTATCATCCGGTTACAGATCGATCTGAATTCTATGTTATGCAAGATCTTGCCAAGCCGCCGGTGCTCTTTTCACCTGCCGATGATATCGAAAAGaGTTTCTATGGACATGAGACTGATTCACCAGACCTAAAGGGTGCATCGCCGTTCTTACTGCAAGGCCAAAAGGTTGCAACGCCAACGCTCAAATTCCACAATCACTTTCCGCCCGATATGCAGACTGACAAGAAAGATCATCTACTGGAGCAGAACCTTATGACCAATACCATGGCCGATTTTGGGCCGCCAATAAAGCGTGGCCGCATCACGCCGCCGACCAGTGAACGTGTCATGCTGTATGTGCGACAGGAGAACGAGGAGGTCTACACGCCGCTGCACGTGGTGCCGCCGAGCACAATAGGGCTACTCAATGCGattgaaaataaatacaaaatctcAACAACGAGCATAAATAACATATATCGCACAAATAAGAAAGGgATTACTGCGAAAATTGATGACGACATGATTTCGTACTACTGCAATGAAGACATTTTCCTACTGGAGGTGCAGCAAATCGAGGATGATCTGTATGATATCACGTTAACGGAGTTGCCCAATCAATGA
- Protein Sequence
- MCVGTYLLSCKFLPFNSSDTSTSTNNSKLNGQTTPIDVSSLSQNEIQGFLLGAHPSSSTAATTTAVSTTISQPTSIIHPAGVSGVANATVVVTAEQQQQQQQQQIISIKREPEDLRKDPKNGANNNNNNNNNNNNASGHGQKVLVVDSTPTLETKTKKSTSPASTSSENMYATTGGTQIYLQTSHTSNANGTGQANLSAQSPSPGPYINPDSYGMYTNRLPPGPPTAFIAEPYYREYFTPDGQGGYVATRSMYGDNEAPQNQTNATYENRFANSTNTTSATAPPPPPPIKSGTPIYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNSIPQSFDYTELCQASAGALIDGNGTIPLPVNNIQRATVTIHGGQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFKYHLESPISSSQRREDDRITYINKGQFYGITLEYVPDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYVMQDLAKPPVLFSPADDIEKSFYGHETDSPDLKGASPFLLQGQKVATPTLKFHNHFPPDMQTDKKDHLLEQNLMTNTMADFGPPIKRGRITPPTSERVMLYVRQENEEVYTPLHVVPPSTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQIEDDLYDITLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00891626; iTF_00890733; iTF_00061687; iTF_00060864;
- 90% Identity
- -
- 80% Identity
- -