Snig012734.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- Ubp1
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010004683.1:1-23785[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-53 4.6e-49 166.8 2.7 19 207 271 458 255 467 0.86 2 2 3.3e-14 3.2e-10 39.8 0.5 186 222 499 535 491 536 0.91
Sequence Information
- Coding Sequence
- GTTCCCAGTCGTCACTATATGAGTGGTTACCATCATCAACACATTGGATCGAATTATGAACaagttataaattttgtagacTCGCCTCCAAATTCTGAAGAATCTTGGACAGATACACAATCAAAAGGGTCCCCAGGGCCACAAATAATCGACGTTCAGACTATTTATTCAAACAGTGGATTACGCAAACGACGAATGGATTGGGAATCATTAGACATCGGTCAAAGTGAAACTTCACCAGCAACGCAGTCCGGAGAGCTACCGGCTAAAGTTTTTCACCTAGAGAGGGACAAACAAAAACGCGAGAAGCAATCAGgCCGAAATAGCTGGAGCGACGATATAGGATTTGATTTGAACGctgaatttaataataattcatatttGAATAATGAatcatttttaactttttcacCTGGCTTGGCCACGCTTAAGCAGGAGCCACATGTTGAGCAGCTAAAGACGACTAAAAGTCCATTACATGCAACTAAtggaaaaatcgaaaaatcgTCTCTTAATGACTGTATTTCTGCGCAGCAAATTTCACaagaagcaaataataaaactgatCTCAGCAATGATGTTGGTGTTAATAATAGTAGCTTCTGCAGCTGTGGTTCGCCGCAAGCTTCACCAACGGCACAGGAGTACAAGTTGAGTTCAATGAGTCTGCCGCCTAAAAAGACAATTGACAAAAATAGTACCAATTCTGGAAATAGTAATACATTGAACGATGTCTACAACCAGTGCAATGGAGCAGTCGTGCAACAGCTTAATGTCGTCGAATCAGCGAAGATTAAGAATTTGTCAATTGATAATACAACATCAAATTCTGAAGATCATAAATTTCAGTACATTTTGGCTGCTGCAACATCGATTGCTACAAAAAATAACGAGGAAACGCTGACTTATCTTAATCAAGGTCAGAGTTATGAAATCAAACTAAAGAAAATTGGAGATTTGTCTTTTTATCGTGATAAGATTTTGAAGagtgttattaaaatttgctttcatGAGCGTCGCCTACAGTTTATGGAGCGGGAACAAATGCAGCAATGGCAGAATTCACGTCCAGGCGAGCGAATTATTGACGTTGATGTTCCACTTTCTTATGGACTTTGTCATGTGTCGCAACCATTAAATCCGAGTTCATTAAATactgttgaaatattttgggACCCATTAAAGGAAGTCGGGGTCTATATCAAAGTTAATTGCATCTCAACAGAATTTACACCAAAGAAGCATGGTGGAGAGAAGGGAGTACCATTTCGTTTGCAAATAGAAACTTTTATAGAAACGACCAGCggttgtaataataataacaagaattGCAATATCGACGACATAAAGATCAGCAACGTTAACAACGCCAATACGAAAAATACAACTTCATCAACAGGAGCAACCAGTTCAGCTTTGCCACCAGGGACATCTGGTAATCGCTCTCCAAACAGTAATTCTGTAAATGGTGCAACATCTCTTTCTGCTACGATCAATGTTAAACAGCCAGTACACGCGGCTGCATGTCAGATTAAGgttTTTAAACTTAAAGGAGCTGATCGAAAGCATAAACAAGATcgtgaaaaaatacaaaaacgtcCGCAATCggagcaacaaaaatttcaacccAGCTATGAATGTACTATAATGaatgaaatttcattagaTTTGCTAATGCCAAACGCCGGAAGTTACAGCCCTGAATgtatGAAAATTTGGCCAAACTCGCCTTCGCATATACCAAAACACGATGGGATATCTTCAAAGTATGCAAGTGTATCACCAACAACCAGTAGCAGCCCAATAGCCATTAATTCAGTTACATCGACCAATTCGCCAACATTGAAGCTCATGGAACCAACCAATATGGTGTCACCACAACATGTTGCGGCCGATATTGACGACTACATCACCAACATAATGCCGGAATCAACGCCAGCGCAAGTTACCCAATGGTTAACCAATCATCGTTTGACAGCTTATTTAGCaacttttgcacatttctCTGGCGCAGACATATTAAGAATGTCCAAAGAAGATCTATTGCAAATCTGTGGTCTAGCCGATGGTATTCGGAtgtataatattttgcgcGCCAAaacAATTACCCCACGGTTGACACTTTATGTTTGTTTGGATGGCAGCAGTTACAAtgccatttatttaattagtaatGCTGCTAAGGAGCTAACACAGAAACTGTTAAAATTACCCGGATTTTACGAGGCTATTGCAAAGAATGTTAATAGCTCAGAGAATGGCGTCGTTGCCTCTAGTCTCTACAACGGTTGGGGATTGCATTCGAAATACTCTGGCAGCGGATCTAACATATTTAATGACGTTAATAAAAGTTGTATCTACATTTCGGGACCATCAGGCATACATGTTACTGTTACAGATGATGTCCTCAATAATGAAATCAAGGATGGTAGTTTATATGCGCTCGAAgtacaaaatggaaaaatcgttttgaaattaatcaataaaaatgaaaattaa
- Protein Sequence
- VPSRHYMSGYHHQHIGSNYEQVINFVDSPPNSEESWTDTQSKGSPGPQIIDVQTIYSNSGLRKRRMDWESLDIGQSETSPATQSGELPAKVFHLERDKQKREKQSGRNSWSDDIGFDLNAEFNNNSYLNNESFLTFSPGLATLKQEPHVEQLKTTKSPLHATNGKIEKSSLNDCISAQQISQEANNKTDLSNDVGVNNSSFCSCGSPQASPTAQEYKLSSMSLPPKKTIDKNSTNSGNSNTLNDVYNQCNGAVVQQLNVVESAKIKNLSIDNTTSNSEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQNSRPGERIIDVDVPLSYGLCHVSQPLNPSSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETFIETTSGCNNNNKNCNIDDIKISNVNNANTKNTTSSTGATSSALPPGTSGNRSPNSNSVNGATSLSATINVKQPVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQQKFQPSYECTIMNEISLDLLMPNAGSYSPECMKIWPNSPSHIPKHDGISSKYASVSPTTSSSPIAINSVTSTNSPTLKLMEPTNMVSPQHVAADIDDYITNIMPESTPAQVTQWLTNHRLTAYLATFAHFSGADILRMSKEDLLQICGLADGIRMYNILRAKTITPRLTLYVCLDGSSYNAIYLISNAAKELTQKLLKLPGFYEAIAKNVNSSENGVVASSLYNGWGLHSKYSGSGSNIFNDVNKSCIYISGPSGIHVTVTDDVLNNEIKDGSLYALEVQNGKIVLKLINKNEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -