Slit002887.1
Basic Information
- Insect
- Spodoptera litura
- Gene Symbol
- GATA-B
- Assembly
- GCA_002706865.1
- Location
- NC:15360056-15390612[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-17 4.1e-14 51.7 7.2 1 34 342 374 342 376 0.97
Sequence Information
- Coding Sequence
- ATGCTGCACGAGTCGTGGCCAGCGGGCTGGCACAAGACGGAGTCCTTCGAGCTGGACGCGCTGTTCGCCGAAGTAAACAACACCTGTTCGAAAGGCGAGGCGGAGTGCGGCGCGGAGGGCAGCGGCGGCGACGCGGAGAGCCCGCCCCCCCTGCCAGCGTTCGGCTACGCCCACGGCGCGCTGTCGCCGTCCCACTCGCGCAGCTACCAGGAGCTGCGGCCGGCCGCGGCACACGCGCGCGACATGCAGGCCTACGCGCACCTCGAGGAGGTGTTCAAGCCCGGCACACCGGCCGCGCCCGGCTCCACGGACGGCGTCTACCTGCGCCGCAGCAGCCCCGACCTCAGCCCCTCGCCCGAGCGCCGCGACGACTTCCGCGCGCACTACGAGCCCTAcacgcccgcgcccgcgccgccggcCTACTCCCACGACCACCACCATCACGTCGACGGtGGCGGAGGGGGTAGCGGAGGGGGAGGAGTCTATTCACGCTGCGCATACGCAGCTGGTTCACCATACTTCGGTAACGGTGCCGAGATAAGCACGCAACCGCAGATCTGGACATCTAGTGCAGGAGGATCCCCCAGCtacggcggcggcggcggcgtggTGCTGGGTGAGGAGTACGCGGAGGGCGGCGGCCAGGAGGGCGCGGGGGGAGGCTCGCTGCCAGCCTTTAGCGCGCGCTTCGGAGGCGCCTTCGCGTGCGCCACCTCGCGCCCCAACACCGTGTACGGCACCAGCACCCTCACCGCGCCGCCGTACTCGCACCAGGAGGTTTGGAACTTGGAGAGCAGTCGACGACCACAAATGTCTGCAGCTGCCAGTCTTTCTGCCATGGCCGCGGAGGGGGCCCCGCCGGGCGCGGATTTCTACAAGGGCTTCCTGTTTAACGGCATGGCGACGTCGCACGCGCACGCGctgcccgcgcccgcgccgctcgCGCACCCCGCGCACCAGCCCTCCACCCCCTCTGACTACAAACAGAAGAAAGGGATGGGCACGAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACGACGACGACGTCGCTGTGGCGCCGCAACTCGCTCGGCGAGACTGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGACCGCTCGCCATGAAGAAGGACTCCATACAGACTCGAAAGAGGAAACCCAAAAACAGTATAAAAGCAGAACGAAGTATAAAGGCAGCAGTGCAACGCACCGTCACGTCGGGAGTGAAGATAGAGAACTTGTTGGAGAGCGGGGCGGGCGCGGGCAGCGGCGGCGCGCGCTCCCCGCTGGCGCTGAACTACTACGTGCAGCACGCGCTGAAGGTGGAGGAGCCGCCGCCCGCGCACGCGCACGGCGCGCCGCCGCAGCACGCGCACGCACACGCACACGCGCACGCGCACACACACGCGCACGCCGCGCTGTACGACGAGGAGTACCGGCGCGCGGCCGACGAGCGCCTGGAGCGGCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MLHESWPAGWHKTESFELDALFAEVNNTCSKGEAECGAEGSGGDAESPPPLPAFGYAHGALSPSHSRSYQELRPAAAHARDMQAYAHLEEVFKPGTPAAPGSTDGVYLRRSSPDLSPSPERRDDFRAHYEPYTPAPAPPAYSHDHHHHVDGGGGGSGGGGVYSRCAYAAGSPYFGNGAEISTQPQIWTSSAGGSPSYGGGGGVVLGEEYAEGGGQEGAGGGSLPAFSARFGGAFACATSRPNTVYGTSTLTAPPYSHQEVWNLESSRRPQMSAAASLSAMAAEGAPPGADFYKGFLFNGMATSHAHALPAPAPLAHPAHQPSTPSDYKQKKGMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERSIKAAVQRTVTSGVKIENLLESGAGAGSGGARSPLALNYYVQHALKVEEPPPAHAHGAPPQHAHAHAHAHAHTHAHAALYDEEYRRAADERLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01362181;
- 90% Identity
- iTF_01362181;
- 80% Identity
- -