Slit002610.1
Basic Information
- Insect
- Spodoptera litura
- Gene Symbol
- pnr
- Assembly
- GCA_002706865.1
- Location
- NC:15281292-15290232[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-18 4e-15 55.0 6.0 1 34 22 54 22 56 0.98
Sequence Information
- Coding Sequence
- ATGAGTGTGGAGGGCATGGCCAGGGGCATGAAGAAGTCCGCAGCGCGGCGTCACGGCCAGTGTTGCACCAACTGTGGCTCGCGCAACACCACGCTGTGGCGACGCAACAATGACGGGGAACCAGTCTGCAACGCGTGCGGACTTTACTACAAGCTGCACGGAATCAACCGGCCCCTAGCTATGCGGAAAGATGGAATTCAGACGCGGAAGCGTAAACCGAAGAAGTCTGGCAACGGAGGCAAGCCTCCGCAGGATGCCAACAAGAAAGATGACCACAACTCTCCGGGGATGGACgACAGTAAACAAAGTCTCCCGGAGGTGCCGCTCCCGCTGACGCAGTCCATGTCCAGTCACGGCGCGTCCAAGCCGCGTGAGCACGCCACGCCCGAGACCTCGCCCCACGCGCACGCCGCGCACGCGCACGCGCTCGGACACTCGCAGGCGCACGCGCACGCGCAGGCCCAGCCCGGGCACGCGCACGCTCAGTACCCGCTGGGGCTGCCGGCCGCGCCCTTCCTGTCCAACCCGTCGCTGTTCAACATCAAGAGCGAGCCCAGCAATGCCAACGGCTACGAGTCCTACCCCACGCACTCCGGCCCGCACTACCACTCGCAGCAACACTATCTGCACGCGCTACAGTATGGCCTCAGCAACAGCGAGGAGGAGGAAGGCAGTGGCTTCTTACACCAGCGCAATGTGACGGCGCACGCCAAGCTGATGGCGTCGACGTAG
- Protein Sequence
- MSVEGMARGMKKSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGGKPPQDANKKDDHNSPGMDDSKQSLPEVPLPLTQSMSSHGASKPREHATPETSPHAHAAHAHALGHSQAHAHAQAQPGHAHAQYPLGLPAAPFLSNPSLFNIKSEPSNANGYESYPTHSGPHYHSQQHYLHALQYGLSNSEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00072392; iTF_00050481; iTF_00274107; iTF_01362176; iTF_00186794;
- 90% Identity
- iTF_01362176;
- 80% Identity
- -