Basic Information

Insect: Spodoptera litura
Gene Symbol: Mtf1
Assembly: GCA_002706865.1
Location: NC:2970690-2999606[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 6.3e-06 0.00035 20.7 0.8 1 23 15 39 15 39 0.99

2 7 0.0011 0.064 13.6 0.4 1 23 45 69 45 69 0.98

3 7 0.01 0.57 10.6 1.7 1 23 75 99 75 99 0.93

4 7 1.3e-06 7.3e-05 22.8 1.3 1 23 104 128 104 128 0.96

5 7 2.3e-05 0.0013 18.9 3.5 1 23 134 158 134 158 0.98

6 7 0.001 0.057 13.7 0.1 1 23 164 188 164 188 0.92

7 7 3.8 2.1e+02 2.5 2.6 2 23 566 589 565 589 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	6.3e-06	0.00035	20.7	0.8	1	23	15	39	15	39	0.99
2	7	0.0011	0.064	13.6	0.4	1	23	45	69	45	69	0.98
3	7	0.01	0.57	10.6	1.7	1	23	75	99	75	99	0.93
4	7	1.3e-06	7.3e-05	22.8	1.3	1	23	104	128	104	128	0.96
5	7	2.3e-05	0.0013	18.9	3.5	1	23	134	158	134	158	0.98
6	7	0.001	0.057	13.7	0.1	1	23	164	188	164	188	0.92
7	7	3.8	2.1e+02	2.5	2.6	2	23	566	589	565	589	0.93

Sequence Information

Coding Sequence: ATGGACAAGAGCAAGAGGAAGCCGGAGGACAGCAGTGCGAGGTACAAATGTGAATATGAGGGTTGTGAACGCACATACAGCACTGTCGGAAACCTGCGCACACACATGAAAACACACAAGGGTGAATACAGGTTCAAATGTCCGATGCAATCATGTGAGAAAGCATTTCTAACGTCATACAGTCTGAAGATACACATTCGCGCGCACACGAAAGCGAAACCTTTCGCTTGCACCATAGGTTCCTGCAGAAAAGCCTTCAACACATTAtatagATTAAGGGCTCATCATCGGCTGCACAGCGGTGACACATTTAACTGCACTGCAGATGGATGCACAAAGTTCTTCACGACCCTCAGCGACCTTAAGAAACACATACGAACACATACACAGGAGAGGCCTTACAAATGTCGAACAGAAGGATGTGGCAAGTCGTTTACGGCGTCACATCACCTGAAGGCTCACGGGCGCACTCACTCGGGGGCGCGGCCCCACGCCTGCCCGGAGCCTGGCTGCGGGAGGCTGTTCTCCACCGCTACCAGTCTCAAAGCCCACGCGGTGAAACACCAGATCAAAACCGAACCAGTCAAAGATATCATTGAACctatacagaaacaaatacaacCGACCAAAACAGGCGAAGATGTCATGAACTGGGACAGCCTACTCGAATCCTTTGGCAGAATCACGACCGAATCCAACTCAACTGACGGCAGCTTAGAAGACATCACCAAAGTCAACACTGTCGACATAACAGAACTCCTTTTCTCAGAAAACAATCAAAACcttaaaaatatagaaacagATGACCTCGCTGTGGACTATGATCTAGCCAGTCTAACTCTATCACCATTCGCCGTCGATAAAGTTGACAGGAAAACCGAAGATCCGTGGGTCGATGTTAACGATCTACAACCCATGGTACCCCTACAAACACCTGAGATTGAGATGACACATCCCAAGTTAGAAGTCAAGTCCAAAGCGATGCAACTGGCGTTGGCAAATGAAATCGAAGACCAAGCACCGTGGGTGGATGTAAGCGCTCTAGCAGCTTCAATATCAGAAACCCCAGTTTGCATCGAAGAAAAAACTCCAGAAAGCATTTTCACGCTAGCAACCTTTGTACCCACACATATGCAGAGTTACATAGACTTGAGTACAGAAGTTGCACCGACCGCCAATCTTATAACCCACGACTCATTCAATTTAGATACTCCAAGTGTACTAGACGTTGGCGATAAAGTGTTCAACGACAGTGAAATAGTCACTAATCTCGATACGAATAAAATAGATACTGATATCGACTTATTCTTAGGGTCTGATGATGATAGATCTCTGAACACACCTCCTCCATCCAAAGTAAGGCAGAACATCGAAATAAACCCAGCCAACTCGGTTCTCTTCAATACGGACTTAGATTTGGAAGATacattattgtttgataatgAACCTCCCTCTGATATGTATGTAGTGAGGACTGAGAATATATTTGGTAAGGTTGCGAAAAGGAATACACTGGAACAGTTGGCGGCTGACGCTGGCATCTGTTCGTGTATGACTTGTGAGTGTGATCCTTCTGTTGGGGAGTGCAGGGGCAATTGTTCTGAAGAAGAACCTCTCGTGGAGCCTCCCAAGCCGCAGCAATGTCTGGACGACACGTGTTCATGTATCGATTGTAAATGCGACCACGAAGCTATGAAGTGCGCAGTAGGTTGCGGGCAAGCTACTGACACAAATCACAACACGTTCTTACATTATCACCGGCGACACAACAATTCAAACTTAGAAGATTTAGGAATATTTACAGTTCATGAAGGTGAAGAAACTCTTCAAACTTCAGCATTGATGAAAAGTTTCGCGTGCTCATGTAGTGGTCATGGATCTGGTGAAAAATGTGGTCATCATCAAGATGAGCAGAAGCCGTCGTGTGGTGACAAGAAGAAAACTTGCAGTGGTGAGAAGACACCTTGTAGTGCCAAAAAAGCCTCTTGTGGTGACAAGAAATCACCCTGTAGCGAAAATAAGTCTCCGTGCAGTGAAAGCAAATCGCCATGTAGTGGTAAGAAGTCGTCATGCAGCGGCAACAATACTCGTTTTACTGACAGTGATACTCCTTGTAGCACCAACAAGACCCCTTGTGGTGGCAAATCGACGCCCTGTGGTGGTGATAAAACGCCATGTGGCGCCAAAAAGTCACCATGTAGCGGCAAAAAATCTACGGAAGAGGGTTCGTGTCAAAACGCCAAAAAGTCTATTGCCGAAGAAGTATCGTCTTGTACGGTCAAAAAAGAAAAGTGCTGTGATGGCGACGAGGCGTGTTGCGTTACAATATGTTTCAAGAAACTTGAAGCTTTCAAACAATTTCTTTCAGATAACGACCTGATACACGCTTTGAAAGCGCATAATTTCAATCTAACATCGAGTTAA
Protein Sequence: MDKSKRKPEDSSARYKCEYEGCERTYSTVGNLRTHMKTHKGEYRFKCPMQSCEKAFLTSYSLKIHIRAHTKAKPFACTIGSCRKAFNTLYRLRAHHRLHSGDTFNCTADGCTKFFTTLSDLKKHIRTHTQERPYKCRTEGCGKSFTASHHLKAHGRTHSGARPHACPEPGCGRLFSTATSLKAHAVKHQIKTEPVKDIIEPIQKQIQPTKTGEDVMNWDSLLESFGRITTESNSTDGSLEDITKVNTVDITELLFSENNQNLKNIETDDLAVDYDLASLTLSPFAVDKVDRKTEDPWVDVNDLQPMVPLQTPEIEMTHPKLEVKSKAMQLALANEIEDQAPWVDVSALAASISETPVCIEEKTPESIFTLATFVPTHMQSYIDLSTEVAPTANLITHDSFNLDTPSVLDVGDKVFNDSEIVTNLDTNKIDTDIDLFLGSDDDRSLNTPPPSKVRQNIEINPANSVLFNTDLDLEDTLLFDNEPPSDMYVVRTENIFGKVAKRNTLEQLAADAGICSCMTCECDPSVGECRGNCSEEEPLVEPPKPQQCLDDTCSCIDCKCDHEAMKCAVGCGQATDTNHNTFLHYHRRHNNSNLEDLGIFTVHEGEETLQTSALMKSFACSCSGHGSGEKCGHHQDEQKPSCGDKKKTCSGEKTPCSAKKASCGDKKSPCSENKSPCSESKSPCSGKKSSCSGNNTRFTDSDTPCSTNKTPCGGKSTPCGGDKTPCGAKKSPCSGKKSTEEGSCQNAKKSIAEEVSSCTVKKEKCCDGDEACCVTICFKKLEAFKQFLSDNDLIHALKAHNFNLTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01362656;
90% Identity: iTF_01362027;
80% Identity: -