Sfru022195.1
Basic Information
- Insect
- Spodoptera frugiperda
- Gene Symbol
- pnr
- Assembly
- GCA_011064685.1
- Location
- JANIPB010001857.1:686736-689853[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-12 1.8e-08 34.2 2.7 1 25 8 31 8 31 0.99 2 2 9.9e-09 3.3e-05 23.8 0.8 17 34 62 78 56 80 0.90
Sequence Information
- Coding Sequence
- ATGTACGAGGAGGGCCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGGCGCGACGCCACGGGCCACTACCTGTGCAACGCCCGAGCAAGCGGCTGTCGGCGGCGCGGCGACACGGCCAGTGTTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGGCGCAACAACGACGGGCGAGCCCGTCTGCAACGCGTGCGGACTCTACTACAAGCTGCACGGAATCAACCGACCTCTAGCCATGCGGAAAGATGGAATTCAGACGCGAAAGCGTAAACCGAAGAAGTCCGGCAACGGAGCCAAGCCCCCGCAGGATGCCAACAAGAAAGATGATCACAACTCTCCGGGGCTGGACGACAGCAAACAAAGTCTCCCGGAGGTGCCGCTGCCGCTGACGCAGTCCATGTCTAGTCACGGCGCGCGTCCAAGCCGCGCGCACGCGCACGCGCAGGCGCAGCCCGGCCACGCGCACGCTCAGTACCCGCTGGGGCTGCCGGCCGCGCCCTTCCTGTCCAACCCGTCGCTGTTCAACATCAAGAGCGAGCCCAGCAACGCCAACGGCTACGAGTCCTACCCCTCGCACTCCGGCCCGCACTACCACTCGCAGCAACACTATCTGCACGCGCTACAGTATGGTCTCAGCAACAGCGAGGAAGAGGAAGGCAGTGGCTTCTTACACCAGCGCAATGTGACGGCGCACGCCAAGCTGATGGCGTCCACGTAG
- Protein Sequence
- MYEEGRECVNCGANNTPLWRRDATGHYLCNARASGCRRRGDTASVAPTAARATPRCGGATTTGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGAKPPQDANKKDDHNSPGLDDSKQSLPEVPLPLTQSMSSHGARPSRAHAHAQAQPGHAHAQYPLGLPAAPFLSNPSLFNIKSEPSNANGYESYPSHSGPHYHSQQHYLHALQYGLSNSEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -