Sfru016141.1
Basic Information
- Insect
- Spodoptera frugiperda
- Gene Symbol
- lov
- Assembly
- GCA_011064685.1
- Location
- JANIPB010000563.1:531410-532256[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-15 4.3e-12 45.9 0.0 1 34 58 91 58 93 0.95
Sequence Information
- Coding Sequence
- ATGGTGCACTCGCGTAATGCCGTCGCGGTGGCGCGGCACACGGCACATGTCGTGCCGCGGAGCCTGCACTTCGCCGCTCGTAAATCACACAACTCCGCGCTCGCGGTTGTTTCCTTACGGCGACCAAAGGGCCAACACAGCGCGCCGCGCGGTGGTCCACCTCGATCGTGGACGAACGCCGAGCTGACGGAGGCGCTGCAGCACGTGTGGAACAAGAAAATGACGACTAGCCAGGCCTCAAGGATCTTTGGCATCCCGTACAACTCGCTGCTAATGAAAGACTGTATTGGCGGACCCCTCGACGTATTAAATCTTAACTCCGGAAACAACAACAACAACCAGCCTTCAGGAAAACATCACGACAAAGACGACCACTCACAACGACCAGCGAGCTCCGAGCCAGACATCGCCTCAAATCCAATGTTCAATCCATTCCAGCAAGGGTTCTACCCGGAGTTCGCTCCAGGCTTCCCGATGCCACTCAACATGCTGCATCTACTCCCGCCTAACGACAAGGCGAGGGAACTATACCAGTCGATGCCGATGGCTCTGGACTCGCTGTCAGGAGTTACGAAGGAGGAAGACTGTAAGAGTGATAGGTCGAAGGAGAACTCCGCCGACGAGGAGGGCGAGTCGTACCGCGCGCCCTCGCACCCGCCGCATCCACCCGACAACCGCACGCTGCTGCATCACAACGGCCAGGACTAA
- Protein Sequence
- MVHSRNAVAVARHTAHVVPRSLHFAARKSHNSALAVVSLRRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMKDCIGGPLDVLNLNSGNNNNNQPSGKHHDKDDHSQRPASSEPDIASNPMFNPFQQGFYPEFAPGFPMPLNMLHLLPPNDKARELYQSMPMALDSLSGVTKEEDCKSDRSKENSADEEGESYRAPSHPPHPPDNRTLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651653;
- 90% Identity
- -
- 80% Identity
- -