Sexi022252.1
Basic Information
- Insect
- Spodoptera exigua
- Gene Symbol
- grn
- Assembly
- GCA_011316535.1
- Location
- CM022068.1:4922470-4945866[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-19 4e-16 58.7 7.5 1 35 13 46 13 47 0.97
Sequence Information
- Coding Sequence
- tcGCTACAGAGCGCAGCGCGACGGGCAGGCACCTCCTGTGCAAACTGCAAGACGACGACGACAACGCTATGGCGACGCAACCAGAATGGAGAACCAGTGTGTAACGCATGCGGCCTTTATTACAAACTacataatGTAAACCGGCCCCTTACGATGAAGAAAGAGGGGATCCAGACGAGAAATCGCAAATTGAGTAGTAAGAGTAAGAAGAAGAAGGGTGGAATGGGAATGGGAGGGGGCGGAGCTTGTGCACTAGCCCTCGGAGGAGTTATGGGAGACATGATCAAGCCGCTAGGTGATGGAACCAAGGGTTTCGGCGGATCCGCCTTCCCATCTGCAATGGACTTTGGTCAGCATCAAGTTGGTCTTGTCCACCCAGCGGCGGCACACATGTCCCACTGGTACGGTGCACCACATCAGGGTTTCGCTCCACCACCAGCGTCACACAACCCCTATCACCACCATCACCTCGCGCAGCTCAATTCAATGACTGGCTGGAGGAGTGAGTACACGTGA
- Protein Sequence
- SLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGGMGMGGGGACALALGGVMGDMIKPLGDGTKGFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPASHNPYHHHHLAQLNSMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01501751; iTF_00209474; iTF_00843982; iTF_00879292; iTF_00289293; iTF_00431151;
- 90% Identity
- iTF_01501751;
- 80% Identity
- -