Basic Information

Insect: Spodoptera exigua
Gene Symbol: ZNF296
Assembly: GCA_011316535.1
Location: CM022070.1:8195663-8215686[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.52 42 5.2 0.1 3 23 117 137 115 137 0.95

2 14 0.0098 0.78 10.7 2.4 1 23 271 293 271 293 0.98

3 14 0.00078 0.062 14.1 0.2 1 23 299 322 299 322 0.96

4 14 0.00077 0.061 14.1 1.7 1 23 327 350 327 350 0.94

5 14 1.7e-06 0.00013 22.5 0.3 2 23 541 562 541 562 0.98

6 14 4.4e-05 0.0035 18.0 4.5 1 23 568 590 568 590 0.99

7 14 0.32 25 5.9 5.1 1 23 648 670 641 670 0.97

8 14 0.00034 0.027 15.2 3.1 1 23 705 727 705 727 0.96

9 14 0.041 3.2 8.7 0.1 2 23 734 755 733 755 0.95

10 14 0.34 27 5.8 6.2 1 23 763 785 763 785 0.98

11 14 0.0009 0.071 13.9 0.8 2 23 830 851 830 851 0.97

12 14 0.00099 0.079 13.8 2.8 1 23 868 890 868 890 0.97

13 14 1.4e-06 0.00011 22.7 0.7 1 23 896 918 896 918 0.98

14 14 1.7e-05 0.0013 19.4 5.3 1 23 924 947 924 947 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.52	42	5.2	0.1	3	23	117	137	115	137	0.95
2	14	0.0098	0.78	10.7	2.4	1	23	271	293	271	293	0.98
3	14	0.00078	0.062	14.1	0.2	1	23	299	322	299	322	0.96
4	14	0.00077	0.061	14.1	1.7	1	23	327	350	327	350	0.94
5	14	1.7e-06	0.00013	22.5	0.3	2	23	541	562	541	562	0.98
6	14	4.4e-05	0.0035	18.0	4.5	1	23	568	590	568	590	0.99
7	14	0.32	25	5.9	5.1	1	23	648	670	641	670	0.97
8	14	0.00034	0.027	15.2	3.1	1	23	705	727	705	727	0.96
9	14	0.041	3.2	8.7	0.1	2	23	734	755	733	755	0.95
10	14	0.34	27	5.8	6.2	1	23	763	785	763	785	0.98
11	14	0.0009	0.071	13.9	0.8	2	23	830	851	830	851	0.97
12	14	0.00099	0.079	13.8	2.8	1	23	868	890	868	890	0.97
13	14	1.4e-06	0.00011	22.7	0.7	1	23	896	918	896	918	0.98
14	14	1.7e-05	0.0013	19.4	5.3	1	23	924	947	924	947	0.98

Sequence Information

Coding Sequence: ATGAATCACCATCTGAACAGGGAAAAGGATCCCTTGAGCTACCCAACATACAACTACCAGGCCCCCACATACCCGTACCAAGACAAACTGCAAGCGATGTATGAGGTGTACGCACAAAATGACACAAGCTTCGTACCCAGAATGCACAGTATGCACAATGCTCAAGTTGCACAACCCATACCGGAACCTGTAACAGCACCAGTACTACCAACATCACAAACCGAAGTCAGCAATAATGAAAATTTGAACATACAGCCAACATCgaagagaaaaaagaaagaCAAGAAAGGAGAAAAAAGTACATTCTGTTCTGAAAAAATCACGGATGCCTCGTTCAAGTTCTATGGATGTGCTGTATGCAATATAAGTTACAGTGCACTGCATGAACTCGACCAACATGTCACCATACACAAGAACAGGATGACCAGCTACCGCCTGCGTCTCCGTAACCAattcaaaaagaaacaaataaaaaaagaaaagaagaagttaaaaaaattaaataaaattaaaaaagaaagtgaaCCATACATTGAAATCAAACCTGAAGACGGGTACATAGGTAACGAGAAAGCCTCAGACTTTGTAACGAataatgaaatagaaaataatggtAATGTTAATAACGGTAACAGTGTAGTAGATAATCAAAATAGTCAATTTAACGGTGGAATGAATTCTGTAAATAACGATGTACAGAATAGTGATAGTTTAAGTAATGGTGATATGTGTAACGGAGTGGATAAAGTGAATGGTAGTGTAGAGGATAAGAGTATGAATGAGACGGAGATGAATAATTTGGAGAAGATCTACAAATGCTTTGCGTGTCTGAAGCAGTTCACTCTCAGCTACTACCTCAAGCTCCATGTACGCTCGCATACTGACGAGAAGCCATACACATGTGCCGCGTGTGGACAGTCGTTCATCACAGCGAGCAAACTGGGGCGTCACAACAAGCGGATACATCTCGCCGAGCGATACCAGTGTCGGATCTGCTTCAAGATATTCTCCAGATTTGAATTGTTGACTGCGCATTTTGACAAGACGCACCCCGAAGACAAGCTGGAGGGAGAGCCTTACGATTACAACGCGATCCTGCCGTACCTCAAGGAACTTGAAGAACAGCTTCAGCTGGACGAGGCCAAGCCCAGCGCTGACAGCGCGCATAGTCTGTGCTGGGAGGACTCCACGGCGGCACAGGCGGGCCTCACTGAACCTGCGCCGCCTGATATCAAGGAGGAGGTACCAGAAGACGACAAAAAGGACACAATACCGAAAATGGAAATAATGCTTGAAGAGGTGAAGGTAGACTGCGACCTCAAAGTCAAGGAGGAGCTGCTTGATGAGGACGAGGGAGACTTCGGAGGTGTGGGGGTGCTGGAGGACGGAGGGGATCACGGGGACAGTGACGCCGGGGATGCTGGAGACGGTGGGGGTTGTGGGGAGGTGGTGGCCGAGGAACCGGACCGTGATGATGATGTAGGAGATGTCAAGAATGAAGATACTGACGCGTCAGATGAGGATTACTTCCCGAGCAATACGTGGGCGGCCCCTCCCCCCTCCTCGCCAGAGGGCGGCGGGGGCGcagggcgggggcgcgggcgggggcgcggggggcgcacGTGCCCAGTTTGCAACAAGAGCGTGAGCAGTGCGTCGTACCTGCGCGTGCACCTGCGCACGCACTCGGGGGAGCGCCCCTACACCTGCACGCACTGCGGACGCGGGTTCATCACCAGCTCCAAGATGCATCGACATGTACTCACACACCAAGATAAAGGCGAGATCAAAACGGAGGGCGACACCAAAGAGGAAGCGAGTGAGAAAGAGATAGCGACAGAAGAAGGAGataaaaaACCAGTTAAGAAACGCGGTCGCAAACCCAAGTCCGAGGCGCAGCCGCCGGCGGAGGGAGGGAAGCGCAAGCATCAGAAGCGACCCCACGCGTGCGAGTACTGCAACCAGAAATTCCTCCATTTAAAAATGTTGGAAGTTCACCGCGAAACGCACTCGGAATCGGAGCGTGTGCTACGCTGCCAGTTCTGCCTGGCAGAGCTGGCAGACTTGGCTGAAAAGGCGGAGCACGAGGCCCAGCATACGGGACCGAAGCCCTACCTCTGCACCATCTGCGGGAAGACATACAAGAAGAGGGAAACTATGACGTACCACCGCAAGCGGCACGCGGGCGCGCGCGCCTGGGTGTGCGAGGTATGCTCGCGCGCGTTCCCCGCGGCGTGCAAGTTGCGCGCGCACGCGGCGCGTCACGCGGCGCGCTACGTGCTGCGCTACGAGTGCCCCGTGTGCGCACACATGTTCCACACGCGCTACCACGTGCACATGCACCTGGGCACGCACCAGCGCGAGGGGCTCGTGGCGCCGCACCAGCGCGCGCAGCTCCTGGCCATGGTGCTGCACAACGCGCGCAGGATCCCGCGCCACGGCGCGCCCGCGCTGTCCGGCCCCGCGCCCGCCGACGAGCGCTCGCGCGTCTGCAACATCTGCGGCGAGCTCTTCCAGCACTTCTACTACCTGGAGGAGCACCTCAAGACCCACGGCTCGCGCATCGCTCTGGAAGACTTCGACCGGCCCGAGGACAAGAAGTACGTCTGTCCCGTCTGCAACAAGGGCTTCAAGCTCCACTACTACCTGAAGCTGCACAGCTTCACGCACTCCAAGGAGAAGCCGTTCATATGCCAGCAGTGCGGGAAGGGGTTCATCACGAAGGGCAAGCTGAAGAGGCACCTGGAGACCCACACGGGGCTGAAGAAGTACCAGTGCCACATCTGCTGCAAGTTCTTCACGAGGCCGAGCTACTTGCGCATCCACATCCGCACCATCCACGGCACGCAGGACTACAACTTCAGACTGGACAAGGCGTACGGGCTGGACTCGATGGCCGCAGCCCCCCCGTCTGACCCCGGCCCCCTCGCCACCTCGGCGCTCCAGCACTAG
Protein Sequence: MNHHLNREKDPLSYPTYNYQAPTYPYQDKLQAMYEVYAQNDTSFVPRMHSMHNAQVAQPIPEPVTAPVLPTSQTEVSNNENLNIQPTSKRKKKDKKGEKSTFCSEKITDASFKFYGCAVCNISYSALHELDQHVTIHKNRMTSYRLRLRNQFKKKQIKKEKKKLKKLNKIKKESEPYIEIKPEDGYIGNEKASDFVTNNEIENNGNVNNGNSVVDNQNSQFNGGMNSVNNDVQNSDSLSNGDMCNGVDKVNGSVEDKSMNETEMNNLEKIYKCFACLKQFTLSYYLKLHVRSHTDEKPYTCAACGQSFITASKLGRHNKRIHLAERYQCRICFKIFSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLQLDEAKPSADSAHSLCWEDSTAAQAGLTEPAPPDIKEEVPEDDKKDTIPKMEIMLEEVKVDCDLKVKEELLDEDEGDFGGVGVLEDGGDHGDSDAGDAGDGGGCGEVVAEEPDRDDDVGDVKNEDTDASDEDYFPSNTWAAPPPSSPEGGGGAGRGRGRGRGGRTCPVCNKSVSSASYLRVHLRTHSGERPYTCTHCGRGFITSSKMHRHVLTHQDKGEIKTEGDTKEEASEKEIATEEGDKKPVKKRGRKPKSEAQPPAEGGKRKHQKRPHACEYCNQKFLHLKMLEVHRETHSESERVLRCQFCLAELADLAEKAEHEAQHTGPKPYLCTICGKTYKKRETMTYHRKRHAGARAWVCEVCSRAFPAACKLRAHAARHAARYVLRYECPVCAHMFHTRYHVHMHLGTHQREGLVAPHQRAQLLAMVLHNARRIPRHGAPALSGPAPADERSRVCNICGELFQHFYYLEEHLKTHGSRIALEDFDRPEDKKYVCPVCNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICCKFFTRPSYLRIHIRTIHGTQDYNFRLDKAYGLDSMAAAPPSDPGPLATSALQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -