Basic Information

Gene Symbol
-
Assembly
GCA_011316535.1
Location
CM022073.1:6078428-6086382[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.69 6.5e+02 0.9 0.0 2 13 74 85 73 91 0.85
2 7 0.19 1.8e+02 2.7 0.0 23 43 343 362 338 365 0.89
3 7 0.00019 0.19 12.2 0.3 12 42 427 462 415 466 0.83
4 7 0.0041 3.9 8.0 0.2 22 46 588 616 570 616 0.76
5 7 7.9e-06 0.0075 16.7 0.1 3 44 667 717 665 719 0.83
6 7 0.00013 0.13 12.8 0.2 22 42 846 873 822 877 0.73
7 7 0.2 1.9e+02 2.6 0.3 3 15 1032 1044 1030 1077 0.88

Sequence Information

Coding Sequence
ATGGATTCTATAGTGGTTAAAACTGAGGTGCAAAGCAATGGAGAGATACTTTTATTCTATGTTGATGaAAATGGTGGCAATGAAGAAGGGGTACTGACCACAgtagaaaatattgaaaatcaaGCTATACAGCTTCAGCAAGATAACTCCTACATAATCCCAGATGTGATTGAAGATAGTAATGAAATTTACAGTACCAATCACCAACCAGCAGCCACTGACAACTGgactgatgatgaaataaacaGACTCCTTGTCTTCTACAAtgataataaacaaactttCATCAATGGCACAACTAAGAAACATCATCTCTGGACTGTTGCATGCAAGACAATGCTTATTGGGAAAAATCCAAAGTTATGTGAGGCCAAACTCCTCAGCTTGCAAACAAAGTACAATGAGATATGTGAAAACATACAAAAAGGACTGTATGAAGAGTGGCCATACTTCCAACTGtgtcataatatatttcaagaTGAAAGCCCAGTGATTACAATTGAAACAGTCAACTCATCTGAACCTCAAATCATTAAAGTACCAGCATTGAAACCAAACATCAGCAATGTTACGACAGTGAAAAAGCCTCCAGTTGATGAAAAAGTTAATACAATGCTAAATTTGTATCTTAAATACAAGGTAAACTTTCAAGAAGAGTACTGGAGACGTGGTTTGTGGGAAACCATTGCAATGGAGATTGGAGAAGATGATGGGGAGTACTGGCAGAAACGTTTCTTGAACTACAAGCAGTACTATTTGAGGTTGCTTGATAAAAAACGGTTGGATGGTTCCGAGAGTATCACCTGGCCATACATGGAgttgtttgataaaatattcgaaGGTGACCCagaatttaatagaaaatacttaaatgaagagtataaaataattgagaACCAAGCAATAGCTGACTCGGAAGAGATACCACCAGAAGACTGGTTAGTTTGTGAAAAAACTGTATTAGTAAAGTACTATTTTGATTGCTATGACGAGTTTGAAGATCCGACGATTCCCAATGGTTTCTTATGGAACGAAATAGGCCGGTTACTCGACAAACCGGCTGATGATTGCAAAGAAAAGTTTGAGGAGTTAAGAGAGGCTCATTTGCAGAAATATATTGAGGGGGCTGTTGTCGATTTGCATAGCAGAAAACCCGTTGATATAGTATATGATCATATAATAGCAAAAGATATTCAAAAGGAAATGGAAAGGAATCGGAGTATACCAGAGAAATTGGAGGTATGGAAGACAACAGAACTGGATAACTTAGTACAATTCTTCTATGACAATATACATTTGTATAAGGACAAGATATGTCATTTTGTATGCTGGGCCGCTGTTGCTAAGAAGTTGAAAAAGACATTACAAAGTTGCAAGAGCCAATGGGATGATCTTGTTCAGTTGTATCAGACTATCTTGAATGATAAGAAGGAATACCCTGATATGCAGATCGATTGGCAATATATTGAAGTTTTCGACAGGATATTTGATTATGGTATGGATACCAACTTGCTGGCTGGTTATGACAAACCGAAGGATGGTGGAGGTTCGAAAAGAGTTAACGAATCGGATTTGGGAAAGGTTGGAGTAAAAAAAGTGAACATCAAGGATGAAATAGGCATGGATGACTTCAGCGACGATGACGAGTCCTACGACGAGAGAGGATTCACTAAGCGAACCAAACGCCGCTCCGGTGACTCAAAAGCGTTCAAAATCCTCGAATATTACcaaaagaacaaagaaaaattcTCCACAACCAACAGAAATAAACATTCCTTATGGGAGGTCCTGGCTAAGCAAATCGGTATCTCCGCTACTCAATGCGCTCACAGATTTAGAAACCTAAAACAAGTTTACACTGCTTACGTCCAAAGAGAGATCAACAAACCAGAGATGCCTATCCTATGGCCTTACTACGCATTGTGCAAAAAAGTCTTTGGCTACCGAGCAATCAAATCGAAGCTCAAGAACGGTAAAATGGACTCGGATGACAGTGAAGACTGGTCAgcaaaggaaattaaaaaactaatcaaTTACGTTGGTCAGAATTTTGAAGATATTGATGGTCTAGTTGATGATGTGAGCAAATGGTCAGATTTGGCAGCTGATATTGGTAAAACTGAGAATTCTTGCAAGGAAAAGTTTATTGAGTTGCGGAGATCTTATAGATCATTGAAGACCATGCGGTGTAGGAATCCAGATGTGAAGATTTCGTGgaaatatttcaatatgtttGAAGATATGTATAAGGCTAAACAGAATGGTAATGATGAGGCTATGGAAGTTGAAGAGCTGGACTTTAATATGGTCTCTGATGAGAAAGAAGAAGAAGACTATCAATGCATCATAGTGATACCAGAAGGTCAAGATATATCACAAATAGAAAACGcccaaattataataaaaggtGAAACTAATTTAGAAACTATACAAGAAGAACCAGCAAAGGAGGTTAAACCGCTACCAAAATGGACGAAACGTACCAAAAAGAGGTTGATTGCCTTCTACATAAACTACATAAGGTCCAATAaaggaaaagaaataaaacctcAAGAGATGTGGAAAGAAATAGCGTCGAAATTTCCCGATAAAACTGTGCAGTCTTGTAGAAAAATGTTTGCGAAACTCAAGGCTAACCATAAACAATTAGACAAATCAGATCCTAATGTGAAAAATAACCCATATTACACCCTCATGGAAAAAGTAATGCGTTTAAAACCGAAATTCAAAAAAGGAGACCAGAACAAGACCCTAAAAGACGGAAAAGTATACAAGGATGTCGCTTTACCAGATGATAAAGTAGTACAAGCATTACAGTACTATTTGGAAAATATAGAGGACTTTGTCAGCCCTAGATTCGAGAAGAAATACTTGTGGACGGAACTAGCTAACTACGTATGCGAGCCTATTACAAAAGTCTTTAACAAATTGAACTATTTGAAGCAACAGTACAACAGCGATACAGATGAGGTTGCCGGCGAAAAAACTCCATTTGCCGAGCTATTAAAAGAGATACAAGCTAAGGAAATAGCTATAAAACTTGTAGTCGATAATAATCCTAAACCAATTATTGAATTACCTGATGTTGAGGAAACTTGGTCTGATGATGAGACGGAACAACTTCTGGAATGGTACCTAAGCAATTTGGAGAAGTTCAAGAACCCTAAATACGTTAGGAGCTATCTTTGGCTGGAAGTTTCCGAGTTATTGAAGAAAAGCGCCATTGCTTGCTCTAAGAAAATGTCGGATGTCCGCACTGAATACAGGAATATGGTCAGGGAAAAACCTGAAGAATTGAATGGATGGAGGTTCTTAGATCTGTGCCAAAAGATCTACGGAACGGGAAGGAAAGGATCGACAAATATTAGTAGTTAA
Protein Sequence
MDSIVVKTEVQSNGEILLFYVDENGGNEEGVLTTVENIENQAIQLQQDNSYIIPDVIEDSNEIYSTNHQPAATDNWTDDEINRLLVFYNDNKQTFINGTTKKHHLWTVACKTMLIGKNPKLCEAKLLSLQTKYNEICENIQKGLYEEWPYFQLCHNIFQDESPVITIETVNSSEPQIIKVPALKPNISNVTTVKKPPVDEKVNTMLNLYLKYKVNFQEEYWRRGLWETIAMEIGEDDGEYWQKRFLNYKQYYLRLLDKKRLDGSESITWPYMELFDKIFEGDPEFNRKYLNEEYKIIENQAIADSEEIPPEDWLVCEKTVLVKYYFDCYDEFEDPTIPNGFLWNEIGRLLDKPADDCKEKFEELREAHLQKYIEGAVVDLHSRKPVDIVYDHIIAKDIQKEMERNRSIPEKLEVWKTTELDNLVQFFYDNIHLYKDKICHFVCWAAVAKKLKKTLQSCKSQWDDLVQLYQTILNDKKEYPDMQIDWQYIEVFDRIFDYGMDTNLLAGYDKPKDGGGSKRVNESDLGKVGVKKVNIKDEIGMDDFSDDDESYDERGFTKRTKRRSGDSKAFKILEYYQKNKEKFSTTNRNKHSLWEVLAKQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKSKLKNGKMDSDDSEDWSAKEIKKLINYVGQNFEDIDGLVDDVSKWSDLAADIGKTENSCKEKFIELRRSYRSLKTMRCRNPDVKISWKYFNMFEDMYKAKQNGNDEAMEVEELDFNMVSDEKEEEDYQCIIVIPEGQDISQIENAQIIIKGETNLETIQEEPAKEVKPLPKWTKRTKKRLIAFYINYIRSNKGKEIKPQEMWKEIASKFPDKTVQSCRKMFAKLKANHKQLDKSDPNVKNNPYYTLMEKVMRLKPKFKKGDQNKTLKDGKVYKDVALPDDKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKLNYLKQQYNSDTDEVAGEKTPFAELLKEIQAKEIAIKLVVDNNPKPIIELPDVEETWSDDETEQLLEWYLSNLEKFKNPKYVRSYLWLEVSELLKKSAIACSKKMSDVRTEYRNMVREKPEELNGWRFLDLCQKIYGTGRKGSTNISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01363066;
90% Identity
-
80% Identity
-