Basic Information

Gene Symbol
Kdm5
Assembly
GCA_011316535.1
Location
CM022073.1:1377112-1402401[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-24 3.1e-21 75.9 0.0 2 89 102 185 101 185 0.94
2 2 9 2.3e+04 -4.3 0.0 46 63 1294 1312 1283 1320 0.75

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAACGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCTACTATGAAACCTGATAATTTCTCGTTCACCCCGCCTCCAGAGGCTCCAGTGTTTGAACCTACGCCAGAAGAATTCTTGGACCCCCTGGCATACATCAGCAAAATACGACCAATCGCCGAGAAGTCGGGCATTTGCAAGATAAAACCTCCAGCGcaCTGGCAGCCCCCATTTGCAGTTGATGTGGACCGGTTAAGATTCACTCCGAGAATACAAAGACTCAATGAGTTGGAGGCAATTACGCGAGTGAAGTTAAACTTCCTTGATCAGATTATAAAGTTTTGGGAGCTGCAGGGGTCTGTCCTGAAGATCCCAACAGTTGAAAGGAAACCATTGGACCTTTACGCTCTACACAAGATTGTTAAAGAAGCAGGTGGTTTCGAAGTATGTTCAGCGGAGCGCAAATGGTCGAAGGTGGCCCGTCGTATGGGCTTTCCCCAAGGCAAAGGCATCGGCTCCATACTGAAGAGCCATTACGAAAAGATCCTCTACAGATACGATATCTTCAAGAACAATGGAGCAGTGGAAAATAAGGATACTAAAATTGAAGTGAAAGGCGAACAAACGCCAGAAAAGACGAGCGGTACGCGGAGTCGGTCGACAAGCAAATGCACGGCTGCCGCGACACCGCCTCCCGCCCGCCGGTTCAAACCGGACCCGGACGGGCCAACCCCCACGGAAACCGTACCCGCTGACAAGACCCCTCAACAACTACAAGAGGAGGCAATGAAGACCCCAGTCAAAGAGGAGAACCCCTCGGAAACTAGGCGAAGTCCTCGTGAAAACAAATGGATGTCAGCAGCCGGTAGTTGCGGCGCCAGATCCCGGGTAACTCGGTCCACGCGACTGCGGGAACATCGCATGTCTAACATGACTGTATCCGTCACGCCGGCGCCCCCTACCAGCCACACATTGCATCCTGACGACCCGCTGGCGAAGTACATGTGCCATGTGTGCGGGCGCGGTGATGTCGAGGAGCAGATGTTGCTCTGTGACGGTTGCGACGACTCTTACCATACCTTCTGCCTGCTCCCCCCGCTCGCAGACGTGCCTAAAGGAGACTGGCGATGCCCTGTATGCTTGGCTGAGGAGGTATCGAAGCCGACGGAAGCGTTTGGTTTTGAGCAAGCAACCCGGGAGTATACTCTACAACAATTCGGAGAGATGGCGGATCAATTCAAATCAGATTACTTCAATATGCCTGTACATATGGTACCAACGTCAACGGTGGAGAAAGAGTTTTGGCGCGTCGTATCCTCATTGGATGAAGATGTTACCGTTGAATATGGCGCCGATTTACATTCTATGGACCATGGATCTGGTTTCCCTACAAAGACACATGCACACCTTTACCCCGGTGAGCAACAGTATGCAGAGTCCAGCTGGAATCTTAACAACCTTCCCGTTCTAGAAGGTTCTGTACTAGGACATATCAACGCAGATATCTCTGGGATGAAGaTCCCTTGGTTATACGTGGGTATGTGCTTTGCGACCTTCTGCTGGCATAATGAGGACCACTGGAGTTATTCTATCAACTACTTACATTGGGGAGAACCTAAAACTTGGTATGGAGTACCAAGTTCAAAAGCGGAACAATTCGAAGCCGCGATGAAGGCTGAGGCTCCCGAGCTGTTCCAGCTGCAACCAGATCTGCTGCATCAGTTGGTTACCATCATGAACCCTAATATCTTGATGAAGGCAGGAGTTCCTGTTTATAGGATGGACCAACATGCCGGCGAATTTGTAATAACGTTCCCTCGGGCTTACCACGCTGGTTTCAACCAAGGATATAACTTTGCTGAGGCTGTCAATTTCACACCTGCTGACTGGTTAAAAATGGGACGAGAATGCATAGCTCACTACTCTACGTTACGCCGTAACTGTGTGTTCTCCCACGACGAGCTGGTCTGCAAGATGGCGTTGGAAGCGGATTCCCTCAGCCTCACCGTGGCACTCGCTGCCTACAGGGACATGAGGACTATGCTGCATGATGAGAGGAAACTCAGGAAGGGCTTGCTGGACTGGgGAGTGACGGAGGCGGAGCGCGAGGCGTTCGAGCTGCTGTCGGACGACGAGCGGCAGTGCACGCTGTGCAAGACGACCTGCTTCCTCTCCTGCGTCGCATGCACCTGCACGCCCAGCGTCGCCTGTCTGCGCCACTACACCCAGCTCTGTCACTGCCCGCCCCATATGCATAAACTCAGATACCGCTACACCTTGGATGAGCTACCAGCGATGTTGGAAAAATTGAAGAAGAAATCGGAACAGTTCCGCGAATGGGCCGAGGCGGTACAGAACGCGTTAGACCCCGACACACCCAAGACTTGTGACCTCGACGGCTTGAGAGCGCATCTTAAGAGGGCGCATGATCTCAAGATGCACAAAACAGAGCTAGTGCGAGCGCTAGAGACAGCAATAGAGGACGCGGAGAAATGCGCGTCCGTGATCCAGCAGCTGGACCTGAACAAGATGCGCACGCGCACGCGGCACCACGACCCCAAGTACCGCCTCACTATACACGAACTCACGCTCTTTGCTGCGGAGATCGACGGGCTCGCATGTGTCTTGCCTGAAGGCTCAGCAGTAAAGGAAGTGCTCCGACAGACATCGGAATTCGAGACCCGTGCTTCTGAACTTTTAAACAAGGATCTGGAGAAAACTGACCAAGCATATGTCAGAGAATTAGAAGAGACATCAGAGCTGGGGTCCCGGCTGTGCATCGTGCTGCCAGCCCTGCCGGCGCTGGTGTCCCGGCTGCAGCAGGCTCGGTTCCTGGACGAGGTGCGCGCCTACCGGGAGGACTGCTCCACCCTCACTCCGGAGGTCATCCAGCGACTGCTGCAGCAGGCTGACAACGTACTGCCGCATCACAGGATCGAGGCCGAGCGAGCTCAACTGCATAGTCTTAAAGcTCAAGTAGATGAATGGGAGAACCGTGCCCGCGCGGTCCTAGTAGACACGACAAAGAATCCTCCATCGGAGGTAGATCCCCAGTACACGACGTTGGCGGAGTTGGAAACGTTGCTGACGGACGGAGAGGAGATTGAGGCCGCGTTACCATCGTACCATGCCTTGCAGACTGCAGTCTCACATGCCAGAGACTGGTTAAGCAAGGTGGAGGAGATGCAGTCGAAGGAGCTGTACCCGTACATGCACAGCGTGGAGAGCGTGGTGCGGCGCGGGGCCGCCATCCCGCTGCAGCTCTACGAGAAGGACCAGCTCGCGCAGGCGCTGCACTCCGCGCGCTCCTGGAAGCGGGGCGCCGCCGACATGTTCCTCAAGAAGAACTGGCCATACTCTCTACTGGAAGCGCTGTCTCCCCGCGTGGAGGTGGGCGAGACGGTAAGCAAGCGTCGCGGGCGCGCGGCGGGCGGGGCCAACGGGGAGCCCGCCTCCTCGCTGGAGGCGGGGCTGTTCCTGCGCAACTTCAGCGAGGACTCCACCCCCACCGACATTGTCGCCGCCTTCAAACAAGCTGAGCAAAAAGAACTACAAGCTATCAAGGACTTAAGGGCGCGCAACCAGCGCAAGGAGGTCCGCGCGCCGGTGTGCGCGGGAGTGACGTTCTGCACGTGCCAGAAGCGGCAGTACGGCGTCATGACGCAGTGCGAGCTCTGCAAGGACTGGTTCCATGCGTCATGTATAGCTGCGAACAAAGAGGAACGTGAGGAGTCCCCCGAACGCGTGGAGTCCAGCTTCCCAACCACTGAACCTAAATTCCTATGTTCTGACTGTGTTAGAACGAAACGGCCACGACTCGATCGCATACTAGCGTTATTGGTATGGCTGCAGAAGCTGCCGGTCCGTCTGGCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACGCGGCGCGCGCGCTGCTGGCCAGCCCCGCCCTGCAGCGCGACCCCGCCCCCTCGCAGCCCGCGCAGCCCCAGCCCGCGCCCTCACCCCACACCGACAAGCTGCACGCCGACCTCAAGAAAGCCACCGGCCGCGCGCATCTACCGCATAATGCCAGGTCTTCAGCGAGCGTAGAGCACGCGTATAGTGCGACGCCTAGATCTCCCAGCGCACGAGCCGCGCCCGGACTGTTACAGAAACTGGAGGACTTGATGCTCGAAGGAGATCTGCTAGAGGTAAAACTGGAGGAGCAGGCGGCGGTGTGGGGCGCGGTGTGCTGGTGGCGCGGCGCGGCGGGGCAGCGCGCGGCGCGGCACGACGCGGGGCGGCGCAAGCGGCACACGCGGGCCCCGCGGCACCACCACCCACTCAAGCGGACGCGGACCCGACACCATCACGTTGCACCCGCAGCGAAACCGACTCTCAAACGTGGCACAGCTACTACTACGAATTATCTCAATAGAAAACAGGGCATGTCGTCAGGATCGGGCCTGATGATGCGCAAGCACTACATGGCGCGGCAGGAGCGTCGCAAGCGGGGCCTCGCTCCCCCCGCCAGGGGCAAGCATGTGCGACAGACTAGGATGGGGCAGCGCGCGGGCGCGGGTCCGTCGGGCGCGGGTCGGGGCGGCGCGACCAGCGCGCGGCGCAGTAGCACGTCGTCCGCATCCTCCGCTGAGGACGATGAGGACTGCGCCGCGCAAAACTGTCTCCGTCCTACTGGTAAGGAAGTGGACTGGGTGCAATGCGACGGAGGATGCGACCAGTGGTTCCACATGCACTGCGTGGGGCTGTCCCGGGGCGCGCTGCGGGAGGACGACGACTACGTCTGCGGGACCTGCGCCCAGCGGGCCCGCCACTAG
Protein Sequence
MGKCDEANVEVSMGDSASPTMKPDNFSFTPPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKVARRMGFPQGKGIGSILKSHYEKILYRYDIFKNNGAVENKDTKIEVKGEQTPEKTSGTRSRSTSKCTAAATPPPARRFKPDPDGPTPTETVPADKTPQQLQEEAMKTPVKEENPSETRRSPRENKWMSAAGSCGARSRVTRSTRLREHRMSNMTVSVTPAPPTSHTLHPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSLDEDVTVEYGADLHSMDHGSGFPTKTHAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRNCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLSDDERQCTLCKTTCFLSCVACTCTPSVACLRHYTQLCHCPPHMHKLRYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTSEFETRASELLNKDLEKTDQAYVRELEETSELGSRLCIVLPALPALVSRLQQARFLDEVRAYREDCSTLTPEVIQRLLQQADNVLPHHRIEAERAQLHSLKAQVDEWENRARAVLVDTTKNPPSEVDPQYTTLAELETLLTDGEEIEAALPSYHALQTAVSHARDWLSKVEEMQSKELYPYMHSVESVVRRGAAIPLQLYEKDQLAQALHSARSWKRGAADMFLKKNWPYSLLEALSPRVEVGETVSKRRGRAAGGANGEPASSLEAGLFLRNFSEDSTPTDIVAAFKQAEQKELQAIKDLRARNQRKEVRAPVCAGVTFCTCQKRQYGVMTQCELCKDWFHASCIAANKEEREESPERVESSFPTTEPKFLCSDCVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLASPALQRDPAPSQPAQPQPAPSPHTDKLHADLKKATGRAHLPHNARSSASVEHAYSATPRSPSARAAPGLLQKLEDLMLEGDLLEVKLEEQAAVWGAVCWWRGAAGQRAARHDAGRRKRHTRAPRHHHPLKRTRTRHHHVAPAAKPTLKRGTATTTNYLNRKQGMSSGSGLMMRKHYMARQERRKRGLAPPARGKHVRQTRMGQRAGAGPSGAGRGGATSARRSSTSSASSAEDDEDCAAQNCLRPTGKEVDWVQCDGGCDQWFHMHCVGLSRGALREDDDYVCGTCAQRARH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036401;
90% Identity
iTF_01362874;
80% Identity
-