Basic Information

Insect: Spilosoma lubricipeda
Gene Symbol: zfh1
Assembly: GCA_905220595.1
Location: HG992282.1:328758-334172[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.16 16 7.2 0.2 3 23 86 106 84 106 0.94

2 8 6.2e-06 0.00061 21.1 2.8 1 23 117 139 117 139 0.98

3 8 1.9e-06 0.00019 22.7 6.2 1 23 148 170 148 170 0.99

4 8 0.00014 0.013 16.8 1.0 1 21 176 196 176 197 0.95

5 8 0.00014 0.014 16.8 1.1 1 20 457 476 457 478 0.93

6 8 1e-05 0.001 20.4 1.1 1 23 776 798 776 798 0.94

7 8 3e-05 0.003 18.9 7.1 1 23 804 826 804 826 0.98

8 8 0.054 5.3 8.7 8.1 1 21 832 852 832 853 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.16	16	7.2	0.2	3	23	86	106	84	106	0.94
2	8	6.2e-06	0.00061	21.1	2.8	1	23	117	139	117	139	0.98
3	8	1.9e-06	0.00019	22.7	6.2	1	23	148	170	148	170	0.99
4	8	0.00014	0.013	16.8	1.0	1	21	176	196	176	197	0.95
5	8	0.00014	0.014	16.8	1.1	1	20	457	476	457	478	0.93
6	8	1e-05	0.001	20.4	1.1	1	23	776	798	776	798	0.94
7	8	3e-05	0.003	18.9	7.1	1	23	804	826	804	826	0.98
8	8	0.054	5.3	8.7	8.1	1	21	832	852	832	853	0.96

Sequence Information

Coding Sequence: ATGGTGTCTGCAGTCGGACAGGCGGAGTTTTTTCTTGGTGCGAAGCAAAGAGCGCGGCGTGCGGGGCGCGCACAGGTGCGGCCAATCACCACACCGCGACTGTGTGCCGCGATCAACAATCGGCCTCTTATCTCCCTGACTATACGCGCCACCACGGtgcTCCGTCCGCTGGCGAGCGGCGGGTCGGAGGGCAAGCCTTCTGAGGAAGAAGAAGAGCGAGGAGGGTCGCCCCTCGGCCCTGGCGGTCCCTATGGCTGTAGTCAGTGTCGCGGAGCCTACCCCACGCGCGAGCAGCTCGAGCGCCACGAGACTCTGCACGCGCCCAACACTCAGGTGGATACCGTCAAATATTCTTGCAAGATCTGCCACAAGAGCTTCGCGAACGTGTACCGCCTGCAGCGACACATGATCAGTCACGACGAAAGCGCATTGCTTCGCAAGTTCAAATGCAACGATTGCGATAAAGCGTTCAAATTTAAACATCATCTGAAGGAGCACTTACGAATACATAGCGGGGAGAAACCCTTCGAATGTGCCAATTGTGGCAAAAAGTTTTCTCACTCCGGTTCTTACTCGAGCCACATGACCTCCAAGAAGTGTCTCGTTATGAACCTCAAAATGGGAAGAATTAAGGCTAATAATCCAGCACTTAACCCAGAAAAGAGTCCATCACGTAGACGGAATAATGCCATGGTTGCCTCGCAGTTGAACAATAACATTGCACCGAATGGCAATTTCCTTCCTATTCTTCCGAAGTACACAGATGCTGCTGCCTTTTTTGCGTCAATGTCATCACCAGATAATAATTTCCACCGTCCACCCTTAGGACAGCCTGGTCTTAACCCTTTTTATATGCCACCTGGTATGCCGATCAGTCCAGCTAGTGCTATCGCTCCTTACAGTATACCGGCTTCTCTCAGCCAATTCTTTGAGACATTAGCTTCATCACAATATCAACCGAGGAAAGTTGAGAATCCCGCAAGTCCTAAACAAGTTCACGCTGATCCTGAAGATTTAATTGAGGAAGTTACAGAGGAAGACGATAAACGGTCAGAAGGGAGTGCTGAGCTTGTGATGGACATAGAAGACGATGACCCTGtgactataaaaaaagaacGTGAAGAAACAGACAATGATGTAAGGTCGCCACCGCGACAATATGATTCCGTCCCTTTAAATAACAATGGCCTTGACTCACAGAACCAATCAGCATACAATTCTATATTAGAATCTGTAAGTGCTTCCGTAACCAAACATTTCTTCAGAGCTAATATGGAGAAACTATCGCCGGTTTCCGGTAACATTTGCCCCAGTATAGAGTCACCGCCTACTGCTCATGTTATTGTAAAGGAAGAACCAGATGATAGTCACAAATGTCTCAAATGTGACACATCCTTTAGCAACAAAAGTGATTTATTAGATCATGAAAAAGAGATCTGTggaaatttatttagaaaacacGAGGGATTGGCAGCTCAAGTTGCAGAAACGGTAGCTCTTAATAGGTTAGAAGCCGAAATGCGTGCTTCCATACAGAGTGGTGTTAGCGCTAGCGAAGATGAAGAGTACCAAAAGGAAGAACGCGAAGATAAAATGTCGATACACGACAATGATAGAAAAATTCGTGTGAGAACAAATCTATCTGAAGAACAGCAAATGGTGTTGAAAGAACATTACGCTTTAAACTCGCGACCTAATCGTGAAGAGTTCAAAAGAATAGCTCAACAGATAGGTCTTGACAATAGAGTGGTACAAGTATGGTTCCAAAATAACAGAGCCAGAGAAAGACGCATGACCGCATCTGATCAGCCGCTGGATTTATCTACGAAAAAATCCAACCCATCAGTAACGTCAAGCCCATCGCCGTCTCCTCCATGCAGCGTTTCTGTGACACATTCCGACTCCGAAGAGGCAGTAAACCTGAGTCAAAAATCGTCGCGAAGCACGACACCTCATCGCACCAATTATTTGAATACTTATCCACATTCCAATTGTTCTTCATCATCTTTTACCGATTTCCGATTGTCTCCTTCGCCAGGGGAACCAATTAATGGACAGAAACGATTACTGCCCCAGAAGTTACATATAAATCCATCCGTTCCAATGGACAAACTCCTTCAATACAACGACATGGCGAATGGAAGGTCACCCATACTTAACATGCACCTATCTTCAGATATGGGTCGACAAGGTTTAAGTCCGTCGTATGAACGCACCCCGTGGGGCGATGACATGCACGTGTCCCACGACATCGAAGATGAAGCATCTGTACTTAAAAAGAGTAAACTAAAGCACGGAGTCGAGTTCAAAGAAGGCGAGGGACAGTTTGTCTGCGATCAATGCGACAAAACATTTGTGAAACAAAGCTCTCTCGCTAGACACAAATACGAACACTCAGgTCAACGCCCCTACAAATGCGGAGAGTGTCCAAAAGCATTCAAACACAAACATCATTTGACGGAACACAAGCGGCTGCACACCGGAGAGAAACCCTTCCAGTGTTGCAAGTGTTTCAAGAAGTTCTCCCACTCTGGCTCCTACAGTCAGCACATGAACCACAGGTTTGCTATCTGCAAGCCGTACCGGGACTAA
Protein Sequence: MVSAVGQAEFFLGAKQRARRAGRAQVRPITTPRLCAAINNRPLISLTIRATTVLRPLASGGSEGKPSEEEEERGGSPLGPGGPYGCSQCRGAYPTREQLERHETLHAPNTQVDTVKYSCKICHKSFANVYRLQRHMISHDESALLRKFKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKANNPALNPEKSPSRRRNNAMVASQLNNNIAPNGNFLPILPKYTDAAAFFASMSSPDNNFHRPPLGQPGLNPFYMPPGMPISPASAIAPYSIPASLSQFFETLASSQYQPRKVENPASPKQVHADPEDLIEEVTEEDDKRSEGSAELVMDIEDDDPVTIKKEREETDNDVRSPPRQYDSVPLNNNGLDSQNQSAYNSILESVSASVTKHFFRANMEKLSPVSGNICPSIESPPTAHVIVKEEPDDSHKCLKCDTSFSNKSDLLDHEKEICGNLFRKHEGLAAQVAETVALNRLEAEMRASIQSGVSASEDEEYQKEEREDKMSIHDNDRKIRVRTNLSEEQQMVLKEHYALNSRPNREEFKRIAQQIGLDNRVVQVWFQNNRARERRMTASDQPLDLSTKKSNPSVTSSPSPSPPCSVSVTHSDSEEAVNLSQKSSRSTTPHRTNYLNTYPHSNCSSSSFTDFRLSPSPGEPINGQKRLLPQKLHINPSVPMDKLLQYNDMANGRSPILNMHLSSDMGRQGLSPSYERTPWGDDMHVSHDIEDEASVLKKSKLKHGVEFKEGEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCGECPKAFKHKHHLTEHKRLHTGEKPFQCCKCFKKFSHSGSYSQHMNHRFAICKPYRD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00281695;
90% Identity: iTF_01360505;
80% Identity: iTF_01360505;