Basic Information

Insect: Spilosoma lubricipeda
Gene Symbol: -
Assembly: GCA_905220595.1
Location: HG992274.1:29287130-29318753[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.2 1.2e+02 4.4 0.7 2 23 489 510 488 510 0.84

2 18 0.008 0.79 11.3 0.0 1 23 520 543 520 543 0.95

3 18 0.011 1.1 10.8 2.7 1 21 666 686 666 687 0.95

4 18 0.044 4.3 9.0 3.8 2 23 748 769 747 769 0.95

5 18 2.3 2.3e+02 3.5 1.5 1 23 781 805 781 805 0.86

6 18 0.00016 0.016 16.6 0.3 2 23 812 835 811 835 0.97

7 18 0.085 8.4 8.0 0.2 1 23 841 863 841 863 0.93

8 18 0.0042 0.41 12.2 2.9 1 23 869 891 869 891 0.98

9 18 0.18 18 7.0 0.3 2 20 902 920 902 922 0.91

10 18 0.07 6.8 8.3 0.2 1 23 1001 1023 1001 1023 0.96

11 18 2.5 2.5e+02 3.4 7.2 1 23 1030 1052 1030 1052 0.95

12 18 0.0017 0.17 13.4 1.8 1 23 1094 1117 1094 1117 0.95

13 18 0.0016 0.15 13.5 0.9 1 23 1124 1147 1124 1147 0.98

14 18 0.017 1.6 10.3 0.2 2 23 1169 1191 1168 1191 0.96

15 18 0.0046 0.45 12.0 2.3 3 23 1217 1238 1216 1238 0.94

16 18 0.0025 0.24 12.9 1.2 1 23 1255 1277 1255 1277 0.97

17 18 0.00015 0.015 16.7 0.1 1 23 1283 1305 1283 1305 0.97

18 18 0.00047 0.046 15.1 0.7 3 23 1313 1334 1311 1334 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.2	1.2e+02	4.4	0.7	2	23	489	510	488	510	0.84
2	18	0.008	0.79	11.3	0.0	1	23	520	543	520	543	0.95
3	18	0.011	1.1	10.8	2.7	1	21	666	686	666	687	0.95
4	18	0.044	4.3	9.0	3.8	2	23	748	769	747	769	0.95
5	18	2.3	2.3e+02	3.5	1.5	1	23	781	805	781	805	0.86
6	18	0.00016	0.016	16.6	0.3	2	23	812	835	811	835	0.97
7	18	0.085	8.4	8.0	0.2	1	23	841	863	841	863	0.93
8	18	0.0042	0.41	12.2	2.9	1	23	869	891	869	891	0.98
9	18	0.18	18	7.0	0.3	2	20	902	920	902	922	0.91
10	18	0.07	6.8	8.3	0.2	1	23	1001	1023	1001	1023	0.96
11	18	2.5	2.5e+02	3.4	7.2	1	23	1030	1052	1030	1052	0.95
12	18	0.0017	0.17	13.4	1.8	1	23	1094	1117	1094	1117	0.95
13	18	0.0016	0.15	13.5	0.9	1	23	1124	1147	1124	1147	0.98
14	18	0.017	1.6	10.3	0.2	2	23	1169	1191	1168	1191	0.96
15	18	0.0046	0.45	12.0	2.3	3	23	1217	1238	1216	1238	0.94
16	18	0.0025	0.24	12.9	1.2	1	23	1255	1277	1255	1277	0.97
17	18	0.00015	0.015	16.7	0.1	1	23	1283	1305	1283	1305	0.97
18	18	0.00047	0.046	15.1	0.7	3	23	1313	1334	1311	1334	0.95

Sequence Information

Coding Sequence: ATGTCGGAAACTCAGCCACCAGTCATTCTATGCATGGAGAGTGCTACCGGGGAAGATGTGACCTTTAAGATTGAACCCAATGACAGTTTCCAGACATTCCTTGAGAAGGCCAAaTCGGTGCTAGGTTTTGAAATAGATGTTAACTCTATAACCAGGAACCAACCAGTAGCCCTTACAGACAACGTTTACCAATTCTTGATCAATAATGAACAGACCATGCAGCCTGAAGGCCTATCACAAACATTGGATCCAATGTTGAGTACAAACGATGGCGCTGACGCCAACGATCTTGTATACATACTTGATGACGGTACACAAATAAGAGCATCTCAAATACATTTTGACAACGATGATCCTTTGATAGACTTAACAGCAGAAAAGATACCATTTGTCAAATACGCTGACGTCACTGACGATATCGATATTGATAATCTCACAGTCgaagaaaccaaaaaaataaatatcgttgAAAGTCCAGTATCAAGGTGGTCCAGTAAAAATTCCAGTCCAAAATGCAGCTTCGTCAATTCTTTACCTTTTAAACTTGTGTGTAATAATACTTCGGGGTTCGAAGCTCAATTTACGAAATATTTAGAAGCCAATACAACTAAAACTTATGCGACTTTGAACCCTGTGACTATCAGAAATAAGTCTCCAAAAAGCTTAATAAAAGATAACTTTAAGAATTATGATAGCTACCAAAGAAGTGACAGCCTTTCGTATACTAGGGAAGACATTCTTAATATGCTCAAAGATTCTCCTATGACGTCACTTCCCTATGATCAGGGTTACAGTGAAAGACGACATGTAAGGAAGACGGATCCATCAAGGCTGGTCCACAAAAGTTGGAATAAACCCATGGCTTATGTGGATATTGATGGGGTTTTGATAGGGGAGAGTGAGAGTCAGATCTGTTTCATCTGTGGGAAACACGTTGACAATAGTGTGGACAAGCTTTATTTATTCGACAATGAAGACCAGAGGGTACACAGATGCTCACCTCAGAAGAAAATGTCGACGCAACTGAAAATTATATGCGAATATTGTTTGAACGAAAATTTTAGACCATGCAGAATGAAAAGTGCTAATCAATTTTTGAATCCAGATGAATTCTTGGTCATAAGAAATAATCAGCAATACATATTTCAGAAGATAAAAAATTTTAGTTTCACACATTATGCGAAAAAAGATACAAAAGAAAGTAAGCAAAACAAAGATGAATTTGTCAAAGTTGAAATTGGTTCTGATGGGGAGATCATAACTAAGCCCATAGACAATGATCTTAGGTCTGATGATGTCATTATAGTTAAGGATGAGAAGAAAGATAGCAGTTCCAGTGACGTAGAAATCATTGAGCCGGAACCAGAGATCGATAGTATCATAGACAATTTGGAGGAAGCTGATGAAGAGGTGAAAGAGTTTTTGGGGAAATACTCATGTGATACGAATGAAGTTGCCGAACTTAAATGCAGGTTCTGTGATAAAATATTCGCAGATGTCGTTGAAGTAATGGAGCATTGTGAAACCCATAAACATGATTTGGAAGAAGGCGAGGTCTTCCCATGCCCGCTTTGTAATTATGGTTATGCCAATTTGAAATGGTTGAAAGGTCATCTTAAAGCAGCTCACGAAAGGAATAAAACTAACGAAGAAGACAAGATGAAGGATGTCAAAGACGAGGCTGAACCTTCGGCGTCTTCAAAAGTGAACTCCCCGATAGCGAAACGGACTCGCAGCTCTAACAGGAAAAGTGATGAGGAAAGAAAAGAAAATGAGACGTCAGACGAAATTAAGACAGATACAAATGTCGTTCCGaCTGAGCAAAAGCCACCCATCTTGAAAACAGAAGTAAAACAAGAAGCGCTGGACAGCAGCGAGGATGAGATCTGGATAGTGCAGACTGCAGATATGGAAACCAACCAAGATCTGACGAAGCTGTTGGTAGCCAACAATAAGGGCCCAGAGGAACAGCAGGCTCCTAAATCCGAAAAGATATTTAAATGCTTTAATTGCAGTCAAATCTTTACGACTGCCGAGAGTTTATCTTCTCATCAGTGCAAACGGAGAGGCAGGAAACGGAAAACGAAAGATGAAAATATTATATGCATACCTACTGAAGAGGATTTCTTAAAGAGGGCCCAAGGGCGTCCTAGACCCCCAACCACGGGAGACAATGATTTGTTAGTGATTCGTTCACGAAAGCGCCGCAACAAACAGCCAACATGGAACCCACAGATAGTGACCTGTCACAATTGTAATGAATCTTTTACTTCCAAAGTGCGCCTCAAATTTCACATGCAGTTCCACGAAAGCTCAAACACCATGATGTCAGACGGGAGATATTTGTGTACAGAATGTACTGGAACCACCTTCTCCACGGAGACGGAGCTGTTCGACCACGTGCACTTCCAGCACGACAAACAGAAGAGGTGGCAGTGTCCTGTCGAGGGATGCGGGAAGACGTTCTTCTTAAGGGCAACCCTGACAAAACATAGTCGCACTCACACGGATACACGTCGGTACGTTTGTGTGACTTGCGGTAAACGGTTCTTGGATAAACAAACTTTAGACGAACATGGAGTCACTCATCTCCAGATCAAGCCGTTCCAATGCCACATCTGCCTGAAGCAGCTGACCCGTCGCTCTCGGCTACGCATGCACGTGCGAGCGCATGAAGAAGAGCTTGCTCCGCGACTAGTGCGGGTGTGCGCTGTCTGCAAGCGCGCCTTCCGAGACGCTCGACACGCACAGGAACACACTACAAAGTCGACTGAATGTATAGAGGCGTACGCTAATGAGCTGAAAGAGGAAACGGAAGAGGTGGCGTTCCAGCTATCGCCCACAAGTGGACTTGTTAGACACACTGTGCAAATAGTTGAGTCTCCAAAGCTATCAAAGCCAATCAAACGCCAAGTGTCGAATGAAGTGGGAGAACCGCTCCTGTCACAGCTGGCTGATGAAGCACGGGCGTTAATAAGAGTGGTGGAGATTGAGAAGGCTTTCAGATGCGAGTACTGCGAAGATGTTTTCTACTTGGAGAGCGGTTTGAATAACCACCGCGTTATTCACAAGGGGGTGAAGAACCCCTTCACCTGTCATATATGTAAAGTCAGCTTCGCCACATATTCCAGGTGTACAACTCACAAAACGACACATGGCTTTTACAAGCGTTCGTTGGCTGACGCTAAGAAGCAAGCTGACGGTTCTAAACAAAAAGATACGGAACCACCTTCAGCTACCGGCATACTGGGATACGGAGACTTTCCCGTCGTCAAACATTTCTTATGCGAGGACTGCGGCCGTTCTTATCTTCACTGGACGTACCTTCAAGTGCACCGTCGTATGAAACATGCCAACGAGAACTTCTTATACAAGTGCAATCAATGTGAAATGACCTTTCCTAACAGTTGGAGTATGGCGTATCACCGAAAGAAAGTTCACGGTAAAACTGGACCTGACGACCCTGGGACTAGCAATAAAATTACCAGAGAAGATTATAGGATACCATGTCGGGATTGTGAGGAAGTTTTACCTAATAAGACAGCGTTGTACAAACACAGGAAAAAAGAACACAGCGATGGTAACTTGTCCGCGACGAGAACAAATAACATGCAAGgTACATTCAGCGGAGAGAGGATATCAAATGCGTGTACGCATTGTCCGGCTACGTTCACGCACGCACCGGACCTACACAAGCATGTCAAGGATGTGCACCAGCAGCAGGAGGCTGGTGGTGATGGTGGGGGCTGGACCCGACGGCCGCACGTGTGCGGGGTGTGTGGCCACGCCTTCCGCACCGTGTCCATGCGCAACGAGCACCTGCGCGTGCACACGGGCGAGCGGCCCTTCCCTTGTGACGTGTGCGGCGTCGCCTTCCGCAGGTCCACGGCGATGCGAAACCACCGGCTTATCCACAGTGGTGTAAGAGCATGGGCTTGCGGTAGATGTCCTAAGCGGTTCAGGATTCGATCCGACCTGAGGACACACTTGCGTCTTAAACACCCGGCTACATTGCTTGTATTTGAAATGGAAGGTCTCAACCCGTCCCCGGATGAAGTAATGAAACATCTCGCGATGCACAATATTTCACACGACAAGGTTATCGAAATAACTAAGATTTCCTTTGCCAAGGGCACGTCAGGAGTGGTTCCAAACAGTGCTCGTGCTCTGAGTGCGCTGAGTGATGTTCCACGCTCGCAGGTGGCCTGTGCCAAGCCCGCACCCACTCCTATACACAACCCACTGGATGAATTCCAGCCGGCCCGTCGTGGCAGGGGCATAGCGAAGAACCCTCGACGACCCAAGATACTGCAGCGGGGCGTTTGTTCACAACAGGAGCCTTCTGCCTACCCACTTGCTGTTAATGTTGGTGGGGAAGAGATACCAGAACTCAATCTCCAGTTCCTACTTCGCGACGGGGTTCTGGTAAATGGCAACCAAATGGTACAACTACAGCTGGATGATCCTATGCTGTTAGAATAA
Protein Sequence: MSETQPPVILCMESATGEDVTFKIEPNDSFQTFLEKAKSVLGFEIDVNSITRNQPVALTDNVYQFLINNEQTMQPEGLSQTLDPMLSTNDGADANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADVTDDIDIDNLTVEETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTTKTYATLNPVTIRNKSPKSLIKDNFKNYDSYQRSDSLSYTREDILNMLKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKSWNKPMAYVDIDGVLIGESESQICFICGKHVDNSVDKLYLFDNEDQRVHRCSPQKKMSTQLKIICEYCLNENFRPCRMKSANQFLNPDEFLVIRNNQQYIFQKIKNFSFTHYAKKDTKESKQNKDEFVKVEIGSDGEIITKPIDNDLRSDDVIIVKDEKKDSSSSDVEIIEPEPEIDSIIDNLEEADEEVKEFLGKYSCDTNEVAELKCRFCDKIFADVVEVMEHCETHKHDLEEGEVFPCPLCNYGYANLKWLKGHLKAAHERNKTNEEDKMKDVKDEAEPSASSKVNSPIAKRTRSSNRKSDEERKENETSDEIKTDTNVVPTEQKPPILKTEVKQEALDSSEDEIWIVQTADMETNQDLTKLLVANNKGPEEQQAPKSEKIFKCFNCSQIFTTAESLSSHQCKRRGRKRKTKDENIICIPTEEDFLKRAQGRPRPPTTGDNDLLVIRSRKRRNKQPTWNPQIVTCHNCNESFTSKVRLKFHMQFHESSNTMMSDGRYLCTECTGTTFSTETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCKRAFRDARHAQEHTTKSTECIEAYANELKEETEEVAFQLSPTSGLVRHTVQIVESPKLSKPIKRQVSNEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNNHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGSKQKDTEPPSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCEMTFPNSWSMAYHRKKVHGKTGPDDPGTSNKITREDYRIPCRDCEEVLPNKTALYKHRKKEHSDGNLSATRTNNMQGTFSGERISNACTHCPATFTHAPDLHKHVKDVHQQQEAGGDGGGWTRRPHVCGVCGHAFRTVSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHSGVRAWACGRCPKRFRIRSDLRTHLRLKHPATLLVFEMEGLNPSPDEVMKHLAMHNISHDKVIEITKISFAKGTSGVVPNSARALSALSDVPRSQVACAKPAPTPIHNPLDEFQPARRGRGIAKNPRRPKILQRGVCSQQEPSAYPLAVNVGGEEIPELNLQFLLRDGVLVNGNQMVQLQLDDPMLLE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502366;
90% Identity: iTF_00441834;
80% Identity: -