Basic Information

Insect: Spilosoma lubricipeda
Gene Symbol: Zfa
Assembly: GCA_905220595.1
Location: HG992299.1:3769359-3781860[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00045 0.044 15.2 2.0 1 23 247 269 247 269 0.99

2 10 0.059 5.8 8.5 0.8 1 23 276 298 276 298 0.98

3 10 3e-06 0.0003 22.0 2.0 1 23 332 355 332 355 0.95

4 10 0.055 5.4 8.6 0.1 2 23 362 384 361 384 0.95

5 10 2.5e-07 2.4e-05 25.5 0.2 1 23 397 419 397 419 0.97

6 10 0.0014 0.14 13.6 0.9 1 22 425 446 425 450 0.93

7 10 0.00039 0.038 15.4 2.7 2 23 459 481 458 481 0.95

8 10 0.0036 0.36 12.4 0.4 1 23 487 510 487 510 0.97

9 10 3.2e-06 0.00031 22.0 0.7 1 23 519 541 519 541 0.99

10 10 0.0022 0.21 13.0 0.3 1 19 547 565 547 570 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00045	0.044	15.2	2.0	1	23	247	269	247	269	0.99
2	10	0.059	5.8	8.5	0.8	1	23	276	298	276	298	0.98
3	10	3e-06	0.0003	22.0	2.0	1	23	332	355	332	355	0.95
4	10	0.055	5.4	8.6	0.1	2	23	362	384	361	384	0.95
5	10	2.5e-07	2.4e-05	25.5	0.2	1	23	397	419	397	419	0.97
6	10	0.0014	0.14	13.6	0.9	1	22	425	446	425	450	0.93
7	10	0.00039	0.038	15.4	2.7	2	23	459	481	458	481	0.95
8	10	0.0036	0.36	12.4	0.4	1	23	487	510	487	510	0.97
9	10	3.2e-06	0.00031	22.0	0.7	1	23	519	541	519	541	0.99
10	10	0.0022	0.21	13.0	0.3	1	19	547	565	547	570	0.91

Sequence Information

Coding Sequence: ATGAATGCCTGCATTACATTCAGTAGTTGGGACAAGGAAGTCAAATCTGAAACTCAAAagaattattgttttgtatgtctgtgtgataacaatgaaagaaaaatacaaaatcacaCATTTATTTGTGGTCCTCTCAAGGAGCTACTACAGATGCAGAGCATAACACTGTGCCATATTTGCAAGAGGATCGCTCAACATACAGAACTGTTTATACAGAATGTACAGAGGAATCAGATCTTGTTGGAAAAAAAATCCtgttcAACAATGGATGAAAATTTACCATCAGACAGACTAAAGTTACACCCTCCAGTAAGTCTAAAGCAAGTCTCATATAAAGTTATTGAATTATCAGAGAATGATGATAATTGTGATGAATCTTCTTCTGTGGTGATCAATATGGAAGAGAAAGTAGATTTTAAAGTGAAGATTGAGATGAAAGAAGAAACAGAGTTGATAGAAAATTTAGAAATCGAGTTTGTAAGCGATAATGGTGAGTCTTCTGAAACATTTATGAAAGAAGAAAACATTCCTCAGAACCCATCATTCAAAGAAGAGTTAAAGCCTGAAAATGACAAGTTAGATTTAAAAGTAAAGTCAACAAGAAAAAAGAAGaaaaaagtcAATATAGTAATACAAGTTACAGAAATACCTGAAGTAAAAATGGTATATATTACAAGGAAACAGTGTATGGAGGAGCGAGCTAAGATGTTAGAAGATCAGAAATATTTAGCTGCCATGTACAAATGTACGGATTGCATTAAAGGGTTCACTTTCAAAGGGAGCTACAACACGCACATGGAGAAGCATAATCAAAGCAATGGTAATTTCGAGTGTGACATTTGCAAACAGAGAATGGATTCAGATGACAAACTAGTCAAACATACGAGATATCATTTTACtCGGTACGTATGTTCGGCATGCGGTTTGTCACGAAACTGCCGAATATCAATCACAGACCACTACTCAGCGTATCACATGGGAGGCGATCACCAGTATAAGTGTACACAGTGTGCGAAGACATTCAATCGGCAGTCGTCGCTCCGCAAGCACGTGTTGTACGTGCACTCTCGAGGCGAGCGCGTTGAGTGCGCGTACTGTGCGGGCTCATACGTCGACAAGGACGTGCTCAAATCGCATATGATGCTAAAACATTCCCAGGAGGTGGCAGCAGTAGAAGTTAGTAAGAGATACGTGTGTACCGAATGTGGGAAGGCGTTCAAAACTCCATCCCTACTCCGCAACCATGGCATCAAACACAGTGACGTACGCAAATACTACTGCGTGGAGTGTgacaagaGCTTTAAATCGGAGTGTATATTGAAAGCCCATTTGAAGACTGCCGTCATCCACGTTAAACATAAAGAATTGCCCTTATCCTGTTTACATTGTGAAGAGCGTTTTTCAAACCGTCGAAATCTCGATAGGCACACGAATCGGATCCATCTAAATGTCAAACCTTACAAATGTGACAGATGTGATAAGGCTTACTTGAACCCATGGGGACTAAAGGACCACAAGCGGTACATTCATGAAGGACATAAAAGGCCAATGCAGTTTACGTGTCCAATGTGTGACAGACTGTTCGATCGTAAAGACGTCCTCAAAAGCCACATACGCACACATACAGGAGAGCGTCCGTATCAATGCAGCAAGTGTCCAGCTCAGTTCAGTCAAGCCAGCGTGCTTAGAACACACGATCGACTCATACACCTCAAACTGACCAGGGATGGTAGACTCAAAAGTGAtgctgttaaataa
Protein Sequence: MNACITFSSWDKEVKSETQKNYCFVCLCDNNERKIQNHTFICGPLKELLQMQSITLCHICKRIAQHTELFIQNVQRNQILLEKKSCSTMDENLPSDRLKLHPPVSLKQVSYKVIELSENDDNCDESSSVVINMEEKVDFKVKIEMKEETELIENLEIEFVSDNGESSETFMKEENIPQNPSFKEELKPENDKLDLKVKSTRKKKKKVNIVIQVTEIPEVKMVYITRKQCMEERAKMLEDQKYLAAMYKCTDCIKGFTFKGSYNTHMEKHNQSNGNFECDICKQRMDSDDKLVKHTRYHFTRYVCSACGLSRNCRISITDHYSAYHMGGDHQYKCTQCAKTFNRQSSLRKHVLYVHSRGERVECAYCAGSYVDKDVLKSHMMLKHSQEVAAVEVSKRYVCTECGKAFKTPSLLRNHGIKHSDVRKYYCVECDKSFKSECILKAHLKTAVIHVKHKELPLSCLHCEERFSNRRNLDRHTNRIHLNVKPYKCDRCDKAYLNPWGLKDHKRYIHEGHKRPMQFTCPMCDRLFDRKDVLKSHIRTHTGERPYQCSKCPAQFSQASVLRTHDRLIHLKLTRDGRLKSDAVK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00441829;
90% Identity: -
80% Identity: -