Basic Information

Insect: Spilosoma lubricipeda
Gene Symbol: -
Assembly: GCA_905220595.1
Location: HG992301.1:6033789-6034967[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.049 59 4.8 0.1 14 27 30 43 17 54 0.86

2 7 0.1 1.2e+02 3.7 0.0 13 43 82 109 77 110 0.81

3 7 2.3 2.8e+03 -0.6 0.1 18 28 216 226 213 239 0.87

4 7 1.5e-05 0.018 16.0 0.5 14 43 242 268 233 269 0.91

5 7 0.028 33 5.6 2.7 5 26 262 283 262 285 0.90

6 7 0.002 2.4 9.2 1.9 14 39 299 321 288 326 0.84

7 7 5.7e-05 0.068 14.2 3.2 2 44 316 354 315 354 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.049	59	4.8	0.1	14	27	30	43	17	54	0.86
2	7	0.1	1.2e+02	3.7	0.0	13	43	82	109	77	110	0.81
3	7	2.3	2.8e+03	-0.6	0.1	18	28	216	226	213	239	0.87
4	7	1.5e-05	0.018	16.0	0.5	14	43	242	268	233	269	0.91
5	7	0.028	33	5.6	2.7	5	26	262	283	262	285	0.90
6	7	0.002	2.4	9.2	1.9	14	39	299	321	288	326	0.84
7	7	5.7e-05	0.068	14.2	3.2	2	44	316	354	315	354	0.90

Sequence Information

Coding Sequence: atggaAGTTGCCAGAAAACTTTTGATTAAGAGACGTAATGTCGAATATGTATTACAGTATAGTAATGTAACACCTTTCATGTGGCACAAGGGCAAGTATAAATGCTTCTACTGCAACGAAACGACCAAGGACCCAGGCCTGCTACGAGAACACACTGCAAATGTTCACCAATTTGCAAATCTAGAACTAGCAGTTTTCGacagaacaaaaaataatagaaataaagatGCTGCAGTCAAAATTGATGTTACTGGAATATCTTGTAAGCTTTGTCCTCAAGTTGTCACGAATTTAGAAGAACTAATACATCATTTGATTATCGCACACGATGCGGAATATGACGTCAGCGTTCCGAATTGCTTGCTACCCTTCAAATTAGACAAAGATCAACCTACGTGTCCCACATGTAATATGAAATTTGTTTTCTTCGAATATTTGCTTAGGCATGCCAACAAGCACCACTTATCCCATCACTACATTTGTGATGTATGCGGTACCAGTTTCCAAGGAGAGAACCATCTAAAAATGCATTACAGATACTATCATAGAGAAGGAGGATATACCTGCGAGTATTGTGGTATAAATCTCGCGACGTTGTCGAAGAAAATTCTCCATGAGAAAAATGTGCATTTGGTGAATCTTTCGACTTGCCCTCATTGCCCAGAAACATTTAAAAGTCCGTACTTAAAGAAACTACATATGGCAAATGTTCATGGCGTAGaggaacttaaaattaaatgtccCTATTGTTCAAAGGTGTATCCGCAGGAGTCTATAATGTCGAGACATATGCGACGAGTACACTTGAGGGAGAAGAACGTCGAATGTGAAGTTTGTGGCGACAAATTCTTCGGTCCTTACGATGTGAAGTTGCACATGGTCAAACATAACGGAGACAagaagtttgtttgttctgtGTGCGGCAAGAAGTTCTCTAAGCGTAGTAATCTGAATTCTCATGTTATATTACACTCCAGAGACAAAGATTATGTATGCGGGATTTGTACTAAAGCTTTCGCTCACCAGACAAATCTCACAATGCACATTAGAAATAGACACCCGGACATTGAGTTCGATGAAACTAGAATAGTTGATGAAATTCCTGAAAGTGAAATGGTGCAGATGGAAATTATCCAAGATGAAATGGAAGGTGATGTGGCTGGACAGTATATTCAATGA
Protein Sequence: MEVARKLLIKRRNVEYVLQYSNVTPFMWHKGKYKCFYCNETTKDPGLLREHTANVHQFANLELAVFDRTKNNRNKDAAVKIDVTGISCKLCPQVVTNLEELIHHLIIAHDAEYDVSVPNCLLPFKLDKDQPTCPTCNMKFVFFEYLLRHANKHHLSHHYICDVCGTSFQGENHLKMHYRYYHREGGYTCEYCGINLATLSKKILHEKNVHLVNLSTCPHCPETFKSPYLKKLHMANVHGVEELKIKCPYCSKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDVKLHMVKHNGDKKFVCSVCGKKFSKRSNLNSHVILHSRDKDYVCGICTKAFAHQTNLTMHIRNRHPDIEFDETRIVDEIPESEMVQMEIIQDEMEGDVAGQYIQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01285796;
90% Identity: iTF_00925098;
80% Identity: iTF_01360934;