Slub026249.2
Basic Information
- Insect
- Spilosoma lubricipeda
- Gene Symbol
- -
- Assembly
- GCA_905220595.1
- Location
- HG992296.1:279417-281125[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00019 0.61 11.5 0.0 47 86 102 141 92 142 0.83 2 4 0.0029 9.6 7.7 0.1 49 83 200 232 165 234 0.80 3 4 0.07 2.3e+02 3.2 0.1 50 83 291 323 277 325 0.81 4 4 0.024 78 4.7 0.0 49 83 392 425 368 428 0.84
Sequence Information
- Coding Sequence
- ATGGATATCAACAATCCTCACAACCAAAGTTACTGGTTTGTCCTCCGAGAAGATCAAAGCAATGTAATTTTTAGCAGCAATAATTTTTCTATCCAAAACTCTCAAATTGCAGGCCCAGAAGCAAGATATATAGTAGACACTGGGGAGCGACCGTACTTACAAATTAATGGAGCACCTATAGTGGTACAGGAACATGTTCCTGATGTGTGTGAAAAAGAAGTGAGTAAGATCAAAGATGAAGAAAAATTTTGGGATAGAAATAAAGTAAGGTCGCTTCTCACTTTATGTTTAGATATTCGATATAGAAATGCCACCAAAGACAAATCTCTGTGGAATGAAATTGCAACACACCTTGGCACAAGTTCTGATGAATGTACTAAGAAGTACAGAAACCTCAGGCGAACCTATGTGAGgctcttaaaaaagaaaaggctAGGGAAAGAAATTAAATGGGTACATTACAACACATGCGAGGAAGTTTTCAAAGAATGTAAATCACTACCGGCCTCAGTCCTTGAACCTTGGGAGGAACACAAAGTGAGGAGATTGCTTACTCTTTATATTGAAAATCTCTGTAAATTTAGAAGTTCAGATTACTTACAAAAAGACCTGTGGAAGGAAATAGCCACCCAGTTAGGCACAACAGACTACAATTGTTACCacaaattcaaaaatttaaagaGAGCTTATTTCAACTGGAAAGAGAGAAGTAGAGAAACAGGAAAACCAATGAAATGGCCGTACCACCATTACTTTGAAAGaatcttttataattataatccaAATATAGGATCCTGGGACAAGAATAAAACAAGATTATTAATAGATGCATACATGCAAATAGCTGACAAATTCAAAAACCCAAGATATCAGAAGAAAGAATTGTGGAAGGAGATATCTGATACAGTTGGAGAAGATCCCACAGATTGTGATAAGaaatttagaaatttgaaacaaacctaCATAAGGTTAAAGATGAGAGAAGATTCCGGCAGGTGTATTACAAAATGGAGGTATTATGAAGACTTTGATGCAATATATGGAGTACAATACCCTCACACGAGCACTGATGCAGGGACATTTACAATGGCATGCAGAACTCAAGATGACAATTATGTGAAACAACTTTTATCTTTCTATGTTGACAAGAAAGAAAGATTCAAGGACCCGTTAGTGAAAAAGAAAAGTCTGTGGAGATTGCTTGCACCGAAAATAGGCTTATCATCAGAAGAATGTGATCGCAAGTTCCGcaacttaaaacaaacatacCTCAGATTggcagaaaaaaaaaaggaaactgGAAAGACAAATAACTGGCCATACTattcttattttgaaaaaatatacaacGAACCCATAACTGGCTCAGGGAAAGTAAACAATCAAAGAGTAGGCCTGGGTCATATCACAATGGCAGACATGAAGAGGATAGTACAAGAAGTTCAACACAGAAAAgataatgataaatttgaaatacTGGTGCAGTCCATAGAAGAATCTAACCACATTCAAAAggaacgaaataaaatattacaagcaTTGTTGGACAGACATTGA
- Protein Sequence
- MDINNPHNQSYWFVLREDQSNVIFSSNNFSIQNSQIAGPEARYIVDTGERPYLQINGAPIVVQEHVPDVCEKEVSKIKDEEKFWDRNKVRSLLTLCLDIRYRNATKDKSLWNEIATHLGTSSDECTKKYRNLRRTYVRLLKKKRLGKEIKWVHYNTCEEVFKECKSLPASVLEPWEEHKVRRLLTLYIENLCKFRSSDYLQKDLWKEIATQLGTTDYNCYHKFKNLKRAYFNWKERSRETGKPMKWPYHHYFERIFYNYNPNIGSWDKNKTRLLIDAYMQIADKFKNPRYQKKELWKEISDTVGEDPTDCDKKFRNLKQTYIRLKMREDSGRCITKWRYYEDFDAIYGVQYPHTSTDAGTFTMACRTQDDNYVKQLLSFYVDKKERFKDPLVKKKSLWRLLAPKIGLSSEECDRKFRNLKQTYLRLAEKKKETGKTNNWPYYSYFEKIYNEPITGSGKVNNQRVGLGHITMADMKRIVQEVQHRKDNDKFEILVQSIEESNHIQKERNKILQALLDRH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00823713;
- 90% Identity
- iTF_00823713;
- 80% Identity
- -