Ssim022793.1
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- gatad1
- Assembly
- GCA_949699795.1
- Location
- OX453078.1:12541432-12544262[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-10 6e-07 29.7 2.3 1 30 6 33 6 38 0.94
Sequence Information
- Coding Sequence
- atgccgCAACCAACATGTGTTCAATGCGATACCAACGATACCCTACTCTGGCGAAGCGCGGAGAATGGTCAAATTTGCAACGATTGTCATCTCGCGAACACGGCCAGAGAAATCAAATCTGAGCCCTGTGGGTCCAATGAGGACGACAGACGGGATGAGGACGATGAAAGGATTGACGGAGAGACCACGCCAGCGAAGGCAACCGGTAGAGGTATAAGGAAAAGCACCAGGTCTACACGGTATAAGGCTAAAACGCCTGCACCAATGCCACCGAAGCCTCCAGCGCCTCGGGGAAGAGGCAGGCGGAGTATATTCAAGAGACAGCCCTTGAAAGCTCCCACTGCTACTGCCACTGTTGTGACGAGcgaatctatattttttaggGGCATGTATATGCAAGTAGGAGACATTGTATCAATGGTCAACTTTGATGGAGGCACATACTACGCACAAATAAGAGGTTTTCTCACAGACCAGTATTGTGAGAAGAGTGCTGTAGTCACATGGCTGTTGCCGACTAAAGCCAGCCCTCCTCCGGAGAAGGGATTTGATCCCGCTACTTATATAATTGGACCAGAAGAAGAGCTACCTCGGAAACTAGAATACATGGACTTCGTAATGCATGCTCCCTCAGATTATTATAAAGCCAGCAACAGTCCATACCCATTAGTAGAAGATGAACTTAATAATTATACTGGATACATTTGGACAACACTTGAAGCTAAGGAGAAAACATAA
- Protein Sequence
- MPQPTCVQCDTNDTLLWRSAENGQICNDCHLANTAREIKSEPCGSNEDDRRDEDDERIDGETTPAKATGRGIRKSTRSTRYKAKTPAPMPPKPPAPRGRGRRSIFKRQPLKAPTATATVVTSESIFFRGMYMQVGDIVSMVNFDGGTYYAQIRGFLTDQYCEKSAVVTWLLPTKASPPPEKGFDPATYIIGPEEELPRKLEYMDFVMHAPSDYYKASNSPYPLVEDELNNYTGYIWTTLEAKEKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00887865;
- 90% Identity
- iTF_00288534; iTF_00673987; iTF_01439565; iTF_01438564; iTF_01153532; iTF_00025713;
- 80% Identity
- -