Ssim006684.1
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- GATA-B
- Assembly
- GCA_949699795.1
- Location
- OX453060.1:124792-138652[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-18 3.4e-14 52.9 3.9 1 34 168 200 168 202 0.97 2 2 1.3e-18 5.1e-15 55.5 6.3 1 34 306 338 306 340 0.97
Sequence Information
- Coding Sequence
- ATGCAGAAGTTTCATGTTGCTCTGTTGAATTTTATGGTTAGGTATGTTGTGGTCAgcagcggcggcggcggtgcgagcggcggcgcggcgagcggcgcggGCGGCACGTACTCGCGCTGCGCGTACGCCGCGCCCGGCTCACCGTACTTCCAGAACAACACCGAGCTGCAGACGCAGATGTGGACGTCCAGTGCGGGAGGATCCCCGAGCTACAGCACGGCGAGCGGGGGCTGCGTGGGCCCGGTGCTGGCGGAGGAGTACGCGGAGGCGGGCGGCGGCGAGGCGGGCgacgcgggcggcggcgcgctgcCCGCCTTCAGCGCGCGCTTCGGCGGCGCCTTCGCCTCCGCGCGCCCCGCCGCCGTCTACAGCACCTCCGCCATCGCCGCCAACGCCTACGCGCACCAGGAGCTGTGGCTGGACAGCCGGCGGCCGCAGCTGTCCGCCGCCGCCAGCCTCTCTGCAATCGAGATGGCGGAGTTTTTCACGGAGGGCCGCGAGTGCGTCAACTGCGGCGCCATCCACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCGGCGCTCGCGCCGGCGCCCGCCCCCGACCAATCCGCGCCCGCCGAGCGTCCGAGCCCGAGCCGAGCCTGTAGGGACGCCTTGTTGGTTGCAGTGGCCGCGGAGGGGGCCCCGCCGGGCGCGGATTACTTCAAGGGCTTCCTGTTTAACGGCGCGCCGCACCACGCGCTctccgcgcccgcgccgctcgGCGCGCCGCTCGCCGCCTCCACCCCCTCCGACTACAAACAGAAGAAGGGGATGGGCACGAAGCGGCCGGGCATGCTGTGCACCAACTGCCAGACCACCACCACGTCGCTGTGGCGCCGCAACGCGCAGGGCGAGACCGTCTGCAACGCGTGCGGCCTGTACTACAAGCTGCACAACATACCGAGGCCGCTCGCCATGAAGAAGGACGCCATCCAGACGAGGAAACGTAAGCCAAAGACGATGAAGGGCGAGCGCAGCGTCGGCAGCAAGGCGCACGGCGCGCTCGCCGCGCACGCGCCGCACGCCGCCGTCAAGATGGAGAACTTACTGGACGGCGGGTCCGGCGGAGGCGCGGCGGGCAGCGCGCGCTCGCCGCTGTCGCTGGGCTACTTCGTGCAGCCGCACGTGAAGCTGGAGCAGCCGCCGCCCGCGCACTcgcacgcgcacgcgcacgcgcaTGCGCACGCGTcgcacgcgcacgcgcacgcgctgTACGACGAGCCCGAGTTCCGGCGCGCCGAGCCGCAGGAGCGCCTCGAGCGCCCCACCGTCGTGTCCATCGGCAGCTGA
- Protein Sequence
- MQKFHVALLNFMVRYVVVSSGGGGASGGAASGAGGTYSRCAYAAPGSPYFQNNTELQTQMWTSSAGGSPSYSTASGGCVGPVLAEEYAEAGGGEAGDAGGGALPAFSARFGGAFASARPAAVYSTSAIAANAYAHQELWLDSRRPQLSAAASLSAIEMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAALAPAPAPDQSAPAERPSPSRACRDALLVAVAAEGAPPGADYFKGFLFNGAPHHALSAPAPLGAPLAASTPSDYKQKKGMGTKRPGMLCTNCQTTTTSLWRRNAQGETVCNACGLYYKLHNIPRPLAMKKDAIQTRKRKPKTMKGERSVGSKAHGALAAHAPHAAVKMENLLDGGSGGGAAGSARSPLSLGYFVQPHVKLEQPPPAHSHAHAHAHAHASHAHAHALYDEPEFRRAEPQERLERPTVVSIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -